Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0579_(-)_676241_676999
DateFri Jul 26 01:50:13 BST 2019
Unique Job IDe78cac8558fa98e5
SequenceMVGYVDVRAY ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:36.464 Y:32.457 Z:28.566
Model (left) based on template c3po0A_
Top template information
PDB header:protein binding
Chain: A: PDB Molecule:small archaeal modifier protein 1;
PDBTitle: crystal structure of samp1 from haloferax volcanii
Confidence and coverage
Confidence: 98.9% Coverage: 29%
73 residues ( 29% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3po0A_
98.9 29
PDB header:protein binding
Chain: A: PDB Molecule:small archaeal modifier protein 1;
PDBTitle: crystal structure of samp1 from haloferax volcanii
2d1vjka_
98.8 20
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:MoaD
3c6jbzD_
98.6 24
PDB header:transferase
Chain: D: PDB Molecule:moad/this family protein;
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
4c2qieB_
98.6 17
PDB header:transferase
Chain: B: PDB Molecule:molybdopterin synthase small subunit;
PDBTitle: staphylococcus aureus molybdopterin synthase in complex with precursor2 z
5d1fm0d_
98.6 23
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:MoaD
6c6jc0A_
98.5 18
PDB header:transferase
Chain: A: PDB Molecule:putative molybdenum cofactor biosynthesis protein d2
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
7c5mpoA_
98.5 16
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin synthase sulfur carrier subunit;
PDBTitle: crystal structure of human molybdopterin synthase complex
8c2qjlA_
98.4 24
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquitin-related modifier 1;
PDBTitle: crystal structure of urm1
9c4n6eB_
98.4 17
PDB header:lyase/biosynthetic protein
Chain: B: PDB Molecule:this/moad family protein;
PDBTitle: crystal structure of amycolatopsis orientalis bexx/cyso complex
10c2m19A_
98.4 23
PDB header:protein binding
Chain: A: PDB Molecule:molybdopterin converting factor subunit 1;
PDBTitle: solution structure of the haloferax volcanii hvo 2177 protein
11c3dwmA_
98.4 28
PDB header:transferase
Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a;
PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen
12c2g1eA_
98.3 28
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ta0895;
PDBTitle: solution structure of ta0895
13d1xo3a_
98.2 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:C9orf74 homolog
14d1wgka_
98.1 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:C9orf74 homolog
15c3rpfC_
98.0 20
PDB header:transferase
Chain: C: PDB Molecule:molybdopterin converting factor, subunit 1 (moad);
PDBTitle: protein-protein complex of subunit 1 and 2 of molybdopterin-converting2 factor from helicobacter pylori 26695
16c1v8cA_
98.0 18
PDB header:protein binding
Chain: A: PDB Molecule:moad related protein;
PDBTitle: crystal structure of moad related protein from thermus2 thermophilus hb8
17c2l52A_
97.9 29
PDB header:protein binding
Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog;
PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans
18c2k9xA_
97.8 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of urm1 from trypanosoma brucei
19d1v8ca1
97.7 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:MoaD
20d1zud21
97.4 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
21c3cwiA_
not modelled 96.8 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:thiamine-biosynthesis protein this;
PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137
22c2kmmA_
not modelled 96.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'-
PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481)
23c2hj1A_
not modelled 96.5 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae
24d2hj1a1
not modelled 96.5 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:HI0395-like
25c3hvzB_
not modelled 96.5 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a
26c2kl0A_
not modelled 96.4 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative thiamin biosynthesis this;
PDBTitle: solution nmr structure of rhodopseudomonas palustris rpa3574,2 northeast structural genomics consortium (nesg) target rpr325
27d2cu3a1
not modelled 96.3 26
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
28d1rwsa_
not modelled 95.9 23
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
29d1tygb_
not modelled 95.8 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
30c1tygG_
not modelled 95.1 14
PDB header:biosynthetic protein
Chain: G: PDB Molecule:yjbs;
PDBTitle: structure of the thiazole synthase/this complex
31d1wxqa2
not modelled 94.8 10
Fold:beta-Grasp (ubiquitin-like)
Superfamily:TGS-like
Family:G domain-linked domain
32d1tkea1
not modelled 93.9 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:TGS-like
Family:TGS domain
33c3na7A_
not modelled 93.8 32
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
34c2k5cA_
not modelled 92.8 21
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein pf0385;
PDBTitle: nmr structure for pf0385
35c4dlpA_
not modelled 91.7 15
PDB header:ligase
Chain: A: PDB Molecule:aminoacyl-trna synthetase, class i:aminoacyl-trna
PDBTitle: crystal structure of methionyl-trna synthetase metrs from brucella2 melitensis bound to selenomethionine
36c5gl7A_
not modelled 91.3 19
PDB header:ligase
Chain: A: PDB Molecule:methionine--trna ligase, cytoplasmic;
PDBTitle: crystal structure of a truncated human cytosolic methionyl-trna2 synthetase
37c5ghaF_
not modelled 91.0 11
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
38c2ekiA_
not modelled 90.8 19
PDB header:signaling protein
Chain: A: PDB Molecule:developmentally-regulated gtp-binding protein 1;
PDBTitle: solution structures of the tgs domain of human2 developmentally-regulated gtp-binding protein 1
39c3gn5B_
not modelled 90.6 17
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
40c5y3tC_
not modelled 90.6 17
PDB header:ligase
Chain: C: PDB Molecule:sharpin;
PDBTitle: crystal structure of hetero-trimeric core of lubac: hoip double-uba2 complexed with hoil-1l ubl and sharpin ubl
41c5xgqB_
not modelled 90.6 21
PDB header:ligase
Chain: B: PDB Molecule:methionine-trna ligase;
PDBTitle: crystal structure of apo form (free-state) mycobacterium tuberculosis2 methionyl-trna synthetase
42d1nyra2
not modelled 89.8 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:TGS-like
Family:TGS domain
43c5urbB_
not modelled 89.6 13
PDB header:ligase
Chain: B: PDB Molecule:methionine--trna ligase;
PDBTitle: crystal structure of methionyl-trna synthetase (metrs) from2 acinetobacter baumannii with bound l-methionine
44c3kflA_
not modelled 89.6 13
PDB header:ligase
Chain: A: PDB Molecule:methionyl-trna synthetase;
PDBTitle: leishmania major methionyl-trna synthetase in complex with2 methionyladenylate and pyrophosphate
45d1v5oa_
not modelled 89.6 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
46c2jxxA_
not modelled 89.2 16
PDB header:protein binding
Chain: A: PDB Molecule:nfatc2-interacting protein;
PDBTitle: nmr solution structure of ubiquitin-like domain of2 nfatc2ip. northeast structural genomics consortium target3 hr5627
47c5z81A_
not modelled 88.7 25
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein 15;
PDBTitle: trimeric structure of vibrio cholerae heat shock protein 15 at 2.32 angstrom resolution
48c1rqgA_
not modelled 88.6 22
PDB header:ligase
Chain: A: PDB Molecule:methionyl-trna synthetase;
PDBTitle: methionyl-trna synthetase from pyrococcus abyssi
49c1tkeA_
not modelled 88.2 15
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine
50d1dm9a_
not modelled 87.9 12
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Heat shock protein 15 kD
51c1dm9A_
not modelled 87.9 12
PDB header:structural genomics
Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka intergenic
PDBTitle: heat shock protein 15 kd
52c1wwtA_
not modelled 87.4 8
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic;
PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase
53c2k6pA_
not modelled 87.3 33
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein hp_1423;
PDBTitle: solution structure of hypothetical protein, hp1423
54c2istA_
not modelled 87.1 18
PDB header:isomerase
Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d;
PDBTitle: crystal structure of rlud from e. coli
55c1pfuA_
not modelled 86.9 15
PDB header:ligase
Chain: A: PDB Molecule:methionyl-trna synthetase;
PDBTitle: methionyl-trna synthetase from escherichia coli complexed2 with methionine phosphinate
56d1wm3a_
not modelled 86.7 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
57c5jp1B_
not modelled 86.6 15
PDB header:hydrolase
Chain: B: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: structure of xanthomonas campestris effector protein xopd bound to2 tomato sumo
58c4iloA_
not modelled 86.0 32
PDB header:unknown function
Chain: A: PDB Molecule:ct398;
PDBTitle: 2.12a resolution structure of ct398 from chlamydia trachomatis
59c5y3tA_
not modelled 85.3 23
PDB header:ligase
Chain: A: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1;
PDBTitle: crystal structure of hetero-trimeric core of lubac: hoip double-uba2 complexed with hoil-1l ubl and sharpin ubl
60c1u0bB_
not modelled 84.1 26
PDB header:ligase/rna
Chain: B: PDB Molecule:cysteinyl trna;
PDBTitle: crystal structure of cysteinyl-trna synthetase binary2 complex with trnacys
61c2k5rA_
not modelled 83.5 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein xf2673;
PDBTitle: solution nmr structure of xf2673 from xylella fastidiosa.2 northeast structural genomics consortium target xfr39
62d1ryja_
not modelled 83.4 25
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:ThiS
63c3c8zB_
not modelled 83.2 16
PDB header:ligase
Chain: B: PDB Molecule:cysteinyl-trna synthetase;
PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway
64c2js4A_
not modelled 82.9 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0434 protein bb2007;
PDBTitle: solution nmr structure of bordetella bronchiseptica protein2 bb2007. northeast structural genomics consortium target3 bor54
65c2ekeC_
not modelled 82.8 15
PDB header:ligase/protein binding
Chain: C: PDB Molecule:ubiquitin-like protein smt3;
PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway
66c1woyA_
not modelled 82.4 18
PDB header:ligase
Chain: A: PDB Molecule:methionyl-trna synthetase;
PDBTitle: crystal structure of methionyl trna synthetase y225f mutant2 from thermus thermophilus
67c2gb5B_
not modelled 82.3 18
PDB header:hydrolase
Chain: B: PDB Molecule:nadh pyrophosphatase;
PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
68d2uyzb1
not modelled 81.7 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
69d1we7a_
not modelled 81.5 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
70c2jr6A_
not modelled 81.4 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0434 protein nma0874;
PDBTitle: solution structure of upf0434 protein nma0874. northeast structural2 genomics target mr32
71d1wjua_
not modelled 81.4 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
72d1wgga_
not modelled 80.9 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
73c2mqjA_
not modelled 80.0 19
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-like protein;
PDBTitle: solution structure of ubiquitin-like protein from caldiarchaeum2 subterraneum
74c5f4hF_
not modelled 79.8 11
PDB header:hydrolase
Chain: F: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
75d2uubd1
not modelled 79.7 46
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Ribosomal protein S4
76d1c06a_
not modelled 79.7 42
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Ribosomal protein S4
77c4k95G_
not modelled 79.4 13
PDB header:ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase parkin;
PDBTitle: crystal structure of parkin
78d2jnya1
not modelled 78.8 21
Fold:Trm112p-like
Superfamily:Trm112p-like
Family:Trm112p-like
79c2n7dA_
not modelled 78.6 21
PDB header:unknown function
Chain: A: PDB Molecule:protein ddi1 homolog 2;
PDBTitle: solution structure of the ubl domain of human ddi2
80c4egxA_
not modelled 78.6 27
PDB header:transport protein
Chain: A: PDB Molecule:kinesin-like protein kif1a;
PDBTitle: crystal structure of kif1a cc1-fha tandem
81c6f5zC_
not modelled 78.3 11
PDB header:transferase
Chain: C: PDB Molecule:upf0434 family protein;
PDBTitle: complex between the haloferax volcanii trm112 methyltransferase2 activator and the hvo_0019 putative methyltransferase
82c4dbgA_
not modelled 78.3 21
PDB header:ligase
Chain: A: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1;
PDBTitle: crystal structure of hoil-1l-ubl complexed with a hoip-uba derivative
83c3bbnD_
not modelled 78.2 46
PDB header:ribosome
Chain: D: PDB Molecule:ribosomal protein s4;
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
84d1wz0a1
not modelled 78.0 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
85c3goeA_
not modelled 77.5 21
PDB header:recombination, replication
Chain: A: PDB Molecule:dna repair protein rad60;
PDBTitle: molecular mimicry of sumo promotes dna repair
86c2hu9B_
not modelled 77.4 22
PDB header:metal transport
Chain: B: PDB Molecule:mercuric transport protein periplasmic component;
PDBTitle: x-ray structure of the archaeoglobus fulgidus copz n-2 terminal domain
87c4dlpB_
not modelled 77.0 25
PDB header:ligase
Chain: B: PDB Molecule:aminoacyl-trna synthetase, class i:aminoacyl-trna
PDBTitle: crystal structure of methionyl-trna synthetase metrs from brucella2 melitensis bound to selenomethionine
88d1ud7a_
not modelled 77.0 23
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
89d1j8ca_
not modelled 77.0 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
90c4qrdA_
not modelled 76.7 22
PDB header:ligase/ligase inhibitor
Chain: A: PDB Molecule:methionyl-trna synthetase;
PDBTitle: structure of methionyl-trna synthetase in complex with n-(1h-2 benzimidazol-2-ylmethyl)-n'-(2,4-dichlorophenyl)-6-(morpholin-4-yl)-3 1,3,5-triazine-2,4-diamine
91c5ijlA_
not modelled 76.5 32
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
92c3a44D_
not modelled 76.3 23
PDB header:metal binding protein
Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa;
PDBTitle: crystal structure of hypa in the dimeric form
93c3m62B_
not modelled 76.3 17
PDB header:ligase/protein binding
Chain: B: PDB Molecule:uv excision repair protein rad23;
PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of rad23
94d2g1la1
not modelled 76.2 27
Fold:SMAD/FHA domain
Superfamily:SMAD/FHA domain
Family:FHA domain
95c3a4rB_
not modelled 76.2 13
PDB header:transcription
Chain: B: PDB Molecule:nfatc2-interacting protein;
PDBTitle: the crystal structure of sumo-like domain 2 in nip45
96c5gjlA_
not modelled 75.7 21
PDB header:protein binding
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of sumo from plasmodium falciparum
97c5xmjJ_
not modelled 75.7 12
PDB header:electron transport
Chain: J: PDB Molecule:succinate dehydrogenase iron-sulfur subunit;
PDBTitle: crystal structure of quinol:fumarate reductase from desulfovibrio2 gigas
98c5ywwA_
not modelled 75.6 12
PDB header:hydrolase
Chain: A: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
99c2eh0A_
not modelled 75.6 27
PDB header:transport protein
Chain: A: PDB Molecule:kinesin-like protein kif1b;
PDBTitle: solution structure of the fha domain from human kinesin-2 like protein kif1b
100c3twkB_
not modelled 75.5 7
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
101c5djoB_
not modelled 75.4 32
PDB header:transport protein
Chain: B: PDB Molecule:kinesin-like protein;
PDBTitle: crystal structure of the cc1-fha tandem of kinesin-3 kif13a
102d1p9ka_
not modelled 75.0 20
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:YbcJ-like
103d1z2ma1
not modelled 74.9 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
104c1nyqA_
not modelled 74.8 13
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase 1;
PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate
105c6hmsB_
not modelled 74.8 29
PDB header:replication
Chain: B: PDB Molecule:dna polymerase ii large subunit,dna polymerase ii large
PDBTitle: cryo-em map of dna polymerase d from pyrococcus abyssi in complex with2 dna
106c1wxqA_
not modelled 74.7 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3
107c5o5jD_
not modelled 74.7 38
PDB header:ribosome
Chain: D: PDB Molecule:30s ribosomal protein s4;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
108c4idiA_
not modelled 74.4 14
PDB header:protein binding
Chain: A: PDB Molecule:oryza sativa rurm1-related;
PDBTitle: crystal structure of rurm1-related protein from plasmodium yoelii,2 py06420
109c4ejqB_
not modelled 73.8 23
PDB header:transport protein
Chain: B: PDB Molecule:kinesin-like protein kif1a;
PDBTitle: crystal structure of kif1a c-cc1-fha
110d1ilea3
not modelled 73.6 9
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain
111c3tixA_
not modelled 73.4 11
PDB header:gene regulation/protein binding
Chain: A: PDB Molecule:ubiquitin-like protein smt3,rna-induced transcriptional
PDBTitle: crystal structure of the chp1-tas3 complex core
112c1yx5B_
not modelled 73.4 22
PDB header:hydrolase
Chain: B: PDB Molecule:ubiquitin;
PDBTitle: solution structure of s5a uim-1/ubiquitin complex
113c5xqmA_
not modelled 73.2 12
PDB header:signaling protein
Chain: A: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: nmr solution structure of smo1, sumo homologue in caenorhabditis2 elegans
114d1wx7a1
not modelled 73.0 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
115c2kd0A_
not modelled 72.9 19
PDB header:signaling protein
Chain: A: PDB Molecule:lrr repeats and ubiquitin-like domain-containing
PDBTitle: nmr solution structure of o64736 protein from arabidopsis2 thaliana. northeast structural genomics consortium mega3 target ar3445a
116c3ziuB_
not modelled 72.7 25
PDB header:ligase
Chain: B: PDB Molecule:leucyl-trna synthetase;
PDBTitle: crystal structure of mycoplasma mobile leucyl-trna2 synthetase with leu-ams in the active site
117d2gy9d1
not modelled 72.5 29
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Ribosomal protein S4
118d1o4wa_
not modelled 72.5 21
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
119c2x1lC_
not modelled 72.5 31
PDB header:ligase
Chain: C: PDB Molecule:methionyl-trna synthetase;
PDBTitle: crystal structure of mycobacterium smegmatis methionyl-trna synthetase2 in complex with methionine and adenosine
120c1v8pK_
not modelled 72.3 26
PDB header:structural genomics, unknown function
Chain: K: PDB Molecule:hypothetical protein pae2754;
PDBTitle: crystal structure of pae2754 from pyrobaculum aerophilum

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite