Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0580c_(-)_677128_677619
DateFri Jul 26 01:50:13 BST 2019
Unique Job ID2c3a1497ca41abf4
SequenceMTDQSYAVDI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.005 Y:34.132 Z:47.105
Model (left) based on template c3r5yC_
Top template information
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent nitroreductase from nocardia2 farcinica, with co-factor f420
Confidence and coverage
Confidence:100.0% Coverage: 77%
126 residues ( 77% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r5yC_



100.0 22
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent nitroreductase from nocardia2 farcinica, with co-factor f420
2c3r5zB_



100.0 16
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
3c3h96B_



100.0 19
PDB header:flavoprotein
Chain: B: PDB Molecule:f420-h2 dependent reductase a;
PDBTitle: msmeg_3358 f420 reductase
4c3r5wO_



100.0 19
PDB header:oxidoreductase
Chain: O: PDB Molecule:deazaflavin-dependent nitroreductase;
PDBTitle: structure of ddn, the deazaflavin-dependent nitroreductase from2 mycobacterium tuberculosis involved in bioreductive activation of pa-3 824, with co-factor f420
5c4y9iA_



99.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:mycobacterium tuberculosis paralogous family 11;
PDBTitle: structure of f420-h2 dependent reductase (fdr-a) msmeg_2027
6c2iabB_



98.9 17
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution
7d1rfea_



98.8 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
8d1w9aa_



98.6 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
9c3f7eB_



98.6 17
PDB header:unknown function
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-
PDBTitle: msmeg_3380 f420 reductase
10d2asfa1



98.6 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
11d2i02a1



98.4 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
12c3db0B_



98.4 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:lin2891 protein;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution
13c3tgvD_



98.3 10
PDB header:heme binding protein
Chain: D: PDB Molecule:heme-binding protein hutz;
PDBTitle: crystal structure of hutz,the heme storsge protein from vibrio2 cholerae
14c4zkyB_



98.2 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5-phosphate oxidase;
PDBTitle: structure of f420 binding protein, msmeg_6526, from mycobacterium2 smegmatis
15d2hq7a1



98.1 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
16c3ec6A_



98.1 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:general stress protein 26;
PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne
17c2htiA_



98.0 12
PDB header:fmn-binding protein
Chain: A: PDB Molecule:bh0577 protein;
PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution
18d2htia1



98.0 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
19c2re7A_



97.9 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution
20d2fg9a1



97.9 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
21d2fura1



not modelled 97.9 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
22d1vl7a_



not modelled 97.9 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
23d2fhqa1



not modelled 97.9 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
24d2hq9a1



not modelled 97.8 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
25c2ig6B_



not modelled 97.7 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:nimc/nima family protein;
PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution
26c3gasA_



not modelled 97.7 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:heme oxygenase;
PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme
27c3fkhB_



not modelled 97.5 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution
28c3u0iA_



not modelled 97.4 11
PDB header:unknown function
Chain: A: PDB Molecule:probable fad-binding, putative uncharacterized protein;
PDBTitle: crystal structure of a probable fad-binding, putative uncharacterized2 protein from brucella melitensis
29c4ybnB_



not modelled 97.4 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavin-nucleotide-binding protein;
PDBTitle: structure of the fad and heme binding protein msmeg_4975 from2 mycobacterium smegmatis
30c5escD_



not modelled 97.4 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:hupz;
PDBTitle: crystal structure of group a streptococcus hupz
31c3cp3A_



not modelled 97.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae
32c2qeaB_



not modelled 97.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative general stress protein 26;
PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution
33d2arza1



not modelled 97.2 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
34c2q9kA_



not modelled 97.2 4
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution
35c6eciQ_



not modelled 97.2 15
PDB header:fad-binding protein
Chain: Q: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding
PDBTitle: structure of the fad binding protein msmeg_5243 from mycobacterium2 smegmatis
36c3u34D_



not modelled 97.1 17
PDB header:protein binding
Chain: D: PDB Molecule:general stress protein;
PDBTitle: crystal structure of the general stress fmn/fad binding protein from2 the phytopathogen xanthomonas citri
37c3dmbA_



not modelled 97.1 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like
PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution
38c3dnhB_



not modelled 97.1 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein atu2129;
PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58
39d1t9ma_



not modelled 97.1 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
40c2htdB_



not modelled 96.8 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576
PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution
41c2hhzA_



not modelled 96.8 8
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution
42c5bncB_



not modelled 96.7 11
PDB header:heme binding protein
Chain: B: PDB Molecule:heme binding protein msmeg_6519;
PDBTitle: structure of heme binding protein msmeg_6519 from mycobacterium2 smegmatis
43c6rk0A_



not modelled 96.5 20
PDB header:flavoprotein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the flavocytochrome anf3 from azotobacter vinelandii
44c4n7rD_



not modelled 96.1 11
PDB header:oxidoreductase/protein binding
Chain: D: PDB Molecule:genomic dna, chromosome 3, p1 clone: mxl8;
PDBTitle: crystal structure of arabidopsis glutamyl-trna reductase in complex2 with its binding protein
45d1ty9a_



not modelled 95.6 10
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
46c1nrgA_



not modelled 95.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase;
PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase
47d1nrga_



not modelled 95.4 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
48c4hmwB_



not modelled 94.9 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of phzg from burkholderia lata 383
49c2ou5B_



not modelled 93.7 11
PDB header:flavoprotein
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution
50d1ci0a_



not modelled 93.5 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
51d2a2ja1



not modelled 93.4 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
52c2a2jA_



not modelled 92.8 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis
53d2vpaa1



not modelled 91.7 11
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
54d1xhna1



not modelled 88.8 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
55d1dnla_



not modelled 87.6 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
56d1flma_



not modelled 84.0 9
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
57c2ol5B_



not modelled 81.0 13
PDB header:transcription regulator
Chain: B: PDB Molecule:pai 2 protein;
PDBTitle: crystal structure of a protease synthase and sporulation negative2 regulatory protein pai 2 from bacillus stearothermophilus
58c2ptfB_



not modelled 72.6 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mth_863;
PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn
59d2ptfa1



not modelled 71.2 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
60c2i51B_



not modelled 33.0 15
PDB header:flavoprotein
Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution
61d1aopa2



not modelled 23.0 25
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
62c3opyG_



not modelled 11.3 16
PDB header:transferase
Chain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit;
PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
63c5zdcL_



not modelled 11.2 19
PDB header:hydrolase
Chain: L: PDB Molecule:poly adp-ribose glycohydrolase;
PDBTitle: crystal structure of poly(adp-ribose) glycohydrolase (parg) from2 deinococcus radiodurans in complex with adp-ribose (p32)
64d2nr4a1



not modelled 10.1 7
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
65d1zj8a1



not modelled 10.1 24
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
66c1ztnA_



not modelled 10.0 38
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily c member 4;
PDBTitle: inactivation gate of potassium channel raw3, nmr, 8 structures
67c3zfnA_



not modelled 10.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:n-terminal protease npro;
PDBTitle: crystal structure of product-like, processed n-terminal protease npro
68d1w7ca3



not modelled 9.1 24
Fold:Cystatin-like
Superfamily:Amine oxidase N-terminal region
Family:Amine oxidase N-terminal region
69c2cqyA_



not modelled 8.8 8
PDB header:ligase
Chain: A: PDB Molecule:propionyl-coa carboxylase alpha chain,
PDBTitle: solution structure of b domain from human propionyl-coa2 carboxylase alpha subunit
70c3opyE_



not modelled 7.8 16
PDB header:transferase
Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit;
PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
71d2imla1



not modelled 7.2 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
72d1ku2a1



not modelled 6.4 50
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma3 domain
73d1v7wa2



not modelled 5.5 23
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:Glycosyltransferase family 36 N-terminal domain
74c4wt5A_



not modelled 5.5 12
PDB header:chaperone
Chain: A: PDB Molecule:rubisco accumulation factor 1, isoform 2;
PDBTitle: the c-terminal domain of rubisco accumulation factor 1 from2 arabidopsis thaliana, crystal form ii
75c1vi7A_



not modelled 5.5 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein yigz;
PDBTitle: crystal structure of an hypothetical protein

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