Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0587_(yrbE2A)_685132_685929
DateFri Jul 26 01:50:14 BST 2019
Unique Job ID4b78344e58f506c5
SequenceMTTHAVIITY ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.588 Y:45.744 Z:70.378
Model (left) based on template c6ic4H_
Top template information
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 95%
253 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4H_



100.0 22
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5x5yG_



74.4 14
PDB header:membrane protein
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
3c5l75F_



64.1 16
PDB header:transport protein
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: a protein structure
4c6mjpG_



56.9 13
PDB header:lipid transport
Chain: G: PDB Molecule:lps export abc transporter permease lptg;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
5c5l75G_



37.2 17
PDB header:transport protein
Chain: G: PDB Molecule:fig000906: predicted permease;
PDBTitle: a protein structure
6c5x5yF_



22.6 15
PDB header:membrane protein
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
7c5xu1M_



22.4 16
PDB header:transport protein
Chain: M: PDB Molecule:abc transporter permeae;
PDBTitle: structure of a non-canonical abc transporter from streptococcus2 pneumoniae r6
8c6qvcB_



21.5 14
PDB header:membrane protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: cryoem structure of the human clc-1 chloride channel, cbs state 1
9d2hafa1



19.0 50
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
10c5ghaF_



17.7 40
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
11c6mjpF_



16.4 18
PDB header:lipid transport
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
12c2m67A_



15.6 6
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: full-length mercury transporter protein merf in lipid bilayer2 membranes
13c2yvxD_



14.2 22
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
14c2aj2A_



14.0 50
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467;
PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8.
15c6coyB_



13.9 14
PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: human clc-1 chloride ion channel, transmembrane domain
16c2hg5D_



13.3 13
PDB header:membrane protein
Chain: D: PDB Molecule:kcsa channel;
PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter
17c2hv8D_



12.9 16
PDB header:protein transport
Chain: D: PDB Molecule:rab11 family-interacting protein 3;
PDBTitle: crystal structure of gtp-bound rab11 in complex with fip3
18c4migC_



12.4 29
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyranose 2-oxidase;
PDBTitle: pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild2 type
19c2mfrA_



11.9 21
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
20c2kn8A_



11.7 29
PDB header:protein binding, dna binding protein
Chain: A: PDB Molecule:dna cleavage and packaging protein large subunit, ul89;
PDBTitle: nmr structure of the c-terminal domain of pul89
21c2wwbB_



not modelled 10.7 11
PDB header:ribosome
Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma;
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the actively2 translating wheat germ 80s ribosome
22d1z96a1



not modelled 10.5 24
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
23c1cf3A_



not modelled 10.0 21
PDB header:oxidoreductase(flavoprotein)
Chain: A: PDB Molecule:protein (glucose oxidase);
PDBTitle: glucose oxidase from apergillus niger
24d1g7oa1



not modelled 8.8 15
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
25c1abzA_



not modelled 8.2 33
PDB header:de novo design
Chain: A: PDB Molecule:alpha-t-alpha;
PDBTitle: alpha-t-alpha, a de novo designed peptide, nmr, 232 structures
26c6bs7A_



not modelled 7.8 41
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of adenylosuccinate synthetase from legionella2 pneumophila philadelphia 1
27c1gw4A_



not modelled 7.5 27
PDB header:high density lipoproteins
Chain: A: PDB Molecule:apoa-i;
PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure
28d1q74a_



not modelled 7.3 32
Fold:LmbE-like
Superfamily:LmbE-like
Family:LmbE-like
29d2k0bx1



not modelled 7.2 20
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
30c2m7xA_



not modelled 7.1 21
PDB header:membrane protein
Chain: A: PDB Molecule:na(+)/h(+) antiporter;
PDBTitle: structural and functional analysis of transmembrane segment iv of the2 salt tolerance protein sod2
31d2do8a1



not modelled 6.8 50
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
32c5nikK_



not modelled 6.6 11
PDB header:transport protein
Chain: K: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: structure of the macab-tolc abc-type tripartite multidrug efflux pump
33d3dhwa1



not modelled 6.3 16
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
34d1i94m_



not modelled 5.8 75
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
35d1rhzb_



not modelled 5.8 10
Fold:Single transmembrane helix
Superfamily:Preprotein translocase SecE subunit
Family:Preprotein translocase SecE subunit
36c2jy8A_



not modelled 5.8 20
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin-binding protein p62;
PDBTitle: nmr structure of the ubiquitin associated (uba) domain of2 p62 (sqstm1) in complex with ubiquitin. rdc refined
37d2hjqa1



not modelled 5.7 20
Fold:LEM/SAP HeH motif
Superfamily:Rho N-terminal domain-like
Family:YqbF C-terminal domain-like
38c1vmaA_



not modelled 5.6 25
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution
39c2onkC_



not modelled 5.5 12
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda
40d2onkc1



not modelled 5.5 12
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
41c3dfmA_



not modelled 5.2 25
PDB header:hydrolase
Chain: A: PDB Molecule:teicoplanin pseudoaglycone deacetylase orf2;
PDBTitle: the crystal structure of the zinc inhibited form of2 teicoplanin deacetylase orf2
42c1q7tA_



not modelled 5.1 35
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein rv1170;
PDBTitle: rv1170 (mshb) from mycobacterium tuberculosis
43c2lxeA_



not modelled 5.1 13
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suvr4;
PDBTitle: s4wyild

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below