Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0588_(yrbE2B)_685931_686818
DateFri Jul 26 01:50:14 BST 2019
Unique Job ID0a57c924cdc0d390
SequenceMVESSTASAA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.397 Y:44.926 Z:72.528
Model (left) based on template c6ic4H_
Top template information
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 86%
254 residues ( 86% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4H_



100.0 21
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5x5yG_



88.9 14
PDB header:membrane protein
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
3c5l75F_



70.9 12
PDB header:transport protein
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: a protein structure
4c5l75G_



70.4 12
PDB header:transport protein
Chain: G: PDB Molecule:fig000906: predicted permease;
PDBTitle: a protein structure
5c6mjpG_



62.4 16
PDB header:lipid transport
Chain: G: PDB Molecule:lps export abc transporter permease lptg;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
6c5x5yF_



50.2 13
PDB header:membrane protein
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
7c5xu1M_



38.7 12
PDB header:transport protein
Chain: M: PDB Molecule:abc transporter permeae;
PDBTitle: structure of a non-canonical abc transporter from streptococcus2 pneumoniae r6
8c6mjpF_



31.6 12
PDB header:lipid transport
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
9c2yvxD_



22.1 16
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
10d2hafa1



21.8 30
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
11c6qvcB_



20.1 11
PDB header:membrane protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: cryoem structure of the human clc-1 chloride channel, cbs state 1
12d1z96a1



16.8 24
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
13c2aj2A_



16.6 30
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467;
PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8.
14c2kn8A_



16.1 21
PDB header:protein binding, dna binding protein
Chain: A: PDB Molecule:dna cleavage and packaging protein large subunit, ul89;
PDBTitle: nmr structure of the c-terminal domain of pul89
15c5ghaF_



16.0 30
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
16c5sv0C_



15.3 16
PDB header:transport protein
Chain: C: PDB Molecule:biopolymer transport protein exbb;
PDBTitle: structure of the exbb/exbd complex from e. coli at ph 7.0
17d2k0bx1



15.2 27
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
18c2hv8D_



12.3 16
PDB header:protein transport
Chain: D: PDB Molecule:rab11 family-interacting protein 3;
PDBTitle: crystal structure of gtp-bound rab11 in complex with fip3
19c2m67A_



11.9 18
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: full-length mercury transporter protein merf in lipid bilayer2 membranes
20c2hg5D_



11.5 16
PDB header:membrane protein
Chain: D: PDB Molecule:kcsa channel;
PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter
21c1q7tA_



not modelled 11.0 40
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein rv1170;
PDBTitle: rv1170 (mshb) from mycobacterium tuberculosis
22c1abzA_



not modelled 10.8 44
PDB header:de novo design
Chain: A: PDB Molecule:alpha-t-alpha;
PDBTitle: alpha-t-alpha, a de novo designed peptide, nmr, 232 structures
23c5ws4A_



not modelled 10.4 12
PDB header:membrane protein
Chain: A: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: crystal structure of tripartite-type abc transporter macb from2 acinetobacter baumannii
24c2jy8A_



not modelled 9.7 27
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin-binding protein p62;
PDBTitle: nmr structure of the ubiquitin associated (uba) domain of2 p62 (sqstm1) in complex with ubiquitin. rdc refined
25c3dfmA_



not modelled 9.6 23
PDB header:hydrolase
Chain: A: PDB Molecule:teicoplanin pseudoaglycone deacetylase orf2;
PDBTitle: the crystal structure of the zinc inhibited form of2 teicoplanin deacetylase orf2
26c6bs7A_



not modelled 9.5 41
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of adenylosuccinate synthetase from legionella2 pneumophila philadelphia 1
27c5nikK_



not modelled 9.1 7
PDB header:transport protein
Chain: K: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: structure of the macab-tolc abc-type tripartite multidrug efflux pump
28d2ieaa3



not modelled 9.0 17
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
29d1q74a_



not modelled 8.8 40
Fold:LmbE-like
Superfamily:LmbE-like
Family:LmbE-like
30d2do8a1



not modelled 8.4 40
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
31d2hjqa1



not modelled 8.4 20
Fold:LEM/SAP HeH motif
Superfamily:Rho N-terminal domain-like
Family:YqbF C-terminal domain-like
32d1i94m_



not modelled 7.7 38
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
33d1g7oa1



not modelled 7.5 16
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
34d2ebfx2



not modelled 7.2 29
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:PMT domain-like
35c4migC_



not modelled 7.2 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyranose 2-oxidase;
PDBTitle: pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild2 type
36c3vvpA_



not modelled 6.8 12
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of mate in complex with br-nrf
37c5ch4E_



not modelled 6.7 11
PDB header:protein transport
Chain: E: PDB Molecule:protein translocase subunit sece;
PDBTitle: peptide-bound state of thermus thermophilus secyeg
38c1cf3A_



not modelled 6.6 13
PDB header:oxidoreductase(flavoprotein)
Chain: A: PDB Molecule:protein (glucose oxidase);
PDBTitle: glucose oxidase from apergillus niger
39d3dhwa1



not modelled 6.6 15
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
40c1gw4A_



not modelled 6.6 36
PDB header:high density lipoproteins
Chain: A: PDB Molecule:apoa-i;
PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure
41c3mk7F_



not modelled 6.5 6
PDB header:oxidoreductase
Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p;
PDBTitle: the structure of cbb3 cytochrome oxidase
42c2lxeA_



not modelled 6.5 7
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suvr4;
PDBTitle: s4wyild
43c3n4qA_



not modelled 6.2 20
PDB header:dna binding protein
Chain: A: PDB Molecule:terminase subunit ul89 protein;
PDBTitle: human cytomegalovirus terminase nuclease domain, mn soaked
44c6humQ_



not modelled 6.1 14
PDB header:proton transport
Chain: Q: PDB Molecule:proton-translocating nadh-quinone dehydrogenase subunit q
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
45c1wr1B_



not modelled 6.1 29
PDB header:signaling protein
Chain: B: PDB Molecule:ubiquitin-like protein dsk2;
PDBTitle: the complex sturcture of dsk2p uba with ubiquitin
46c5azcA_



not modelled 5.8 23
PDB header:transferase
Chain: A: PDB Molecule:prolipoprotein diacylglyceryl transferase;
PDBTitle: crystal structure of escherichia coli lgt in complex with2 phosphatidylglycerol
47c2jy5A_



not modelled 5.8 27
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquilin-1;
PDBTitle: nmr structure of ubiquilin 1 uba domain
48c4w86B_



not modelled 5.7 22
PDB header:hydrolase
Chain: B: PDB Molecule:xyloglucan-specific endo-beta-1,4-glucanase;
PDBTitle: crystal structure of xeg5a, a gh5 xyloglucan-specific endo-beta-1,4-2 glucanase from ruminal metagenomic library, in complex with glucose3 and tris
49d2bwba1



not modelled 5.7 27
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
50c3n4pA_



not modelled 5.7 20
PDB header:dna binding protein
Chain: A: PDB Molecule:terminase subunit ul89 protein;
PDBTitle: human cytomegalovirus terminase nuclease domain
51c5egiB_



not modelled 5.6 6
PDB header:membrane protein
Chain: B: PDB Molecule:uncharacterized protein y57a10a.10;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 with bound ca2+
52c2n0pA_



not modelled 5.6 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein aq_1974;
PDBTitle: solution structure of aquifex aeolicus aq1974
53d1veja1



not modelled 5.6 29
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
54c5eikA_



not modelled 5.6 13
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein y57a10a.28;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 in the absence of ca2+
55c5fiyE_



not modelled 5.6 50
PDB header:apoptosis
Chain: E: PDB Molecule:prkc apoptosis wt1 regulator protein;
PDBTitle: crystal structure of coiled coil domain of pawr
56c1zaxV_



not modelled 5.5 36
PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
57c1zavW_



not modelled 5.5 36
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
58c1zavV_



not modelled 5.5 36
PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
59d1zavu1



not modelled 5.5 36
Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
60c1zavU_



not modelled 5.5 36
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
61c1zaxU_



not modelled 5.5 36
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
62c1zaxW_



not modelled 5.5 36
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
63c1zaxY_



not modelled 5.5 36
PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
64c1zavY_



not modelled 5.5 36
PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
65c1zaxX_



not modelled 5.5 36
PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
66c1zavX_



not modelled 5.5 36
PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
67c2mfrA_



not modelled 5.5 6
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
68c5eulE_



not modelled 5.4 12
PDB header:protein transport
Chain: E: PDB Molecule:preprotein translocase sece subunit;
PDBTitle: structure of the seca-secy complex with a translocating polypeptide2 substrate
69c1dd3D_



not modelled 5.3 36
PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
70c1dd3C_



not modelled 5.3 36
PDB header:ribosome
Chain: C: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
71c2cwbA_



not modelled 5.2 27
PDB header:protein binding
Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g
PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin
72c5i34B_



not modelled 5.2 41
PDB header:ligase
Chain: B: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: adenylosuccinate synthetase from cryptococcus neoformans complexed2 with gdp and imp
73c2bkiA_



not modelled 5.2 20
PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure
74c3dinD_



not modelled 5.1 17
PDB header:membrane protein, protein transport
Chain: D: PDB Molecule:preprotein translocase subunit sece;
PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
75c5d3aA_



not modelled 5.1 33
PDB header:motor protein
Chain: A: PDB Molecule:kinesin-like protein kif21a;
PDBTitle: kif21a regulatory coiled coil
76c3dfiA_



not modelled 5.1 29
PDB header:hydrolase
Chain: A: PDB Molecule:pseudoaglycone deacetylase dbv21;
PDBTitle: the crystal structure of antimicrobial reagent a40926 pseudoaglycone2 deacetylase dbv21
77d1tc3c_



not modelled 5.1 9
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain

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Transmembrane helix prediction 

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