Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0591_(mce2C)_689062_690507
DateFri Jul 26 01:50:15 BST 2019
Unique Job ID76fdcbfb7be78ac7
SequenceMRTLTEFNRG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.645 Y:39.672 Z:68.181
Model (left) based on template c6ic4C_
Top template information
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence: 99.9% Coverage: 27%
128 residues ( 27% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
372 residues ( 77%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4C_
99.9 28
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5uw8C_
99.7 26
PDB header:transport protein
Chain: C: PDB Molecule:probable phospholipid abc transporter-binding protein mlad;
PDBTitle: structure of e. coli mce protein mlad, core mce domain
3c5uvnC_
99.4 20
PDB header:transport protein
Chain: C: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
4c5uvnA_
99.4 20
PDB header:transport protein
Chain: A: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
5c5uvnB_
99.4 20
PDB header:transport protein
Chain: B: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
6c5uvnE_
99.4 20
PDB header:transport protein
Chain: E: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
7c5uvnD_
99.4 20
PDB header:transport protein
Chain: D: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
8c5uvnF_
99.4 20
PDB header:transport protein
Chain: F: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
9c1qu7A_
96.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
10c3g67A_
95.6 11
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
11c6e6aB_
95.5 15
PDB header:protein binding
Chain: B: PDB Molecule:inclusion membrane protein a;
PDBTitle: triclinic crystal form of inca g144a point mutant
12c6gajA_
94.4 17
PDB header:viral protein
Chain: A: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail (iodide)
13c2ch7A_
94.0 11
PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
14c2wpqA_
93.9 3
PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in-2 register fusion)
15c6gapB_
93.3 12
PDB header:viral protein
Chain: B: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t3d reovirus sigma1 coiled coil tail and body
16c4nl6C_
91.8 16
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
17c1wyyB_
91.6 13
PDB header:viral protein
Chain: B: PDB Molecule:e2 glycoprotein;
PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
18c2dq3A_
91.5 14
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of aq_298
19c1ei3C_
91.3 9
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
20c1kmiZ_
90.8 11
PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
21c1deqF_
not modelled 89.9 13
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
22c5xbjA_
not modelled 89.9 9
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar hook-associated protein flgk;
PDBTitle: the structure of the flagellar hook junction protein hap1 (flgk) from2 campylobacter jejuni
23c3zx6A_
not modelled 89.5 8
PDB header:signaling
Chain: A: PDB Molecule:hamp, methyl-accepting chemotaxis protein i;
PDBTitle: structure of hamp(af1503)-tsr fusion - hamp (a291v) mutant
24c3lnrA_
not modelled 89.4 10
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
25c2ieqC_
not modelled 89.1 15
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
26c6b7nC_
not modelled 88.2 20
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
27c5u0pU_
not modelled 88.1 13
PDB header:transcription
Chain: U: PDB Molecule:mediator complex subunit 21;
PDBTitle: cryo-em structure of the transcriptional mediator
28c3cwgA_
not modelled 88.1 10
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
29d1eq1a_
not modelled 87.9 12
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
30c1deqO_
not modelled 87.4 15
PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
31c4rh7A_
not modelled 87.3 12
PDB header:motor protein
Chain: A: PDB Molecule:green fluorescent protein/cytoplasmic dynein 2 heavy chain
PDBTitle: crystal structure of human cytoplasmic dynein 2 motor domain in2 complex with adp.vi
32c5dfzA_
not modelled 87.0 13
PDB header:transferase
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 38;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
33c3ghgK_
not modelled 86.1 14
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
34c1ei3E_
not modelled 85.0 16
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
35c3ghgI_
not modelled 84.8 7
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
36c4abxB_
not modelled 84.7 8
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair protein recn;
PDBTitle: crystal structure of deinococcus radiodurans recn coiled-2 coil domain
37c2p22A_
not modelled 83.9 6
PDB header:transport protein
Chain: A: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: structure of the yeast escrt-i heterotetramer core
38c5szsC_
not modelled 83.2 17
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: glycan shield and epitope masking of a coronavirus spike protein2 observed by cryo-electron microscopy
39c3ojaB_
not modelled 82.0 12
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
40d1st6a4
not modelled 81.0 14
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
41c4ut1A_
not modelled 81.0 14
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook-associated protein;
PDBTitle: the structure of the flagellar hook junction protein flgk2 from burkholderia pseudomallei
42c2qihA_
not modelled 81.0 11
PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from moraxella2 catarrhalis
43d1ykhb1
not modelled 81.0 9
Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
44c1quuA_
not modelled 80.8 14
PDB header:contractile protein
Chain: A: PDB Molecule:human skeletal muscle alpha-actinin 2;
PDBTitle: crystal structure of two central spectrin-like repeats from alpha-2 actinin
45c5j65A_
not modelled 80.4 8
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry6aa;
PDBTitle: crystal structure of trypsin activated cry6aa
46c6ezvX_
not modelled 79.7 10
PDB header:toxin
Chain: X: PDB Molecule:non-hemolytic enterotoxin lytic component l1;
PDBTitle: the cytotoxin maka from vibrio cholerae
47c2nrjA_
not modelled 79.1 13
PDB header:toxin
Chain: A: PDB Molecule:hbl b protein;
PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus
48c3j99M_
not modelled 78.4 8
PDB header:hydrolase
Chain: M: PDB Molecule:synaptosomal-associated protein 25;
PDBTitle: structure of 20s supercomplex determined by single particle2 cryoelectron microscopy (state iiib)
49c5lskD_
not modelled 77.1 14
PDB header:cell cycle
Chain: D: PDB Molecule:kinetochore-associated protein dsn1 homolog;
PDBTitle: crystal structure of the human kinetochore mis12-cenp-c complex
50c2efrB_
not modelled 77.0 11
PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
51d1g4us1
not modelled 76.0 19
Fold:Four-helical up-and-down bundle
Superfamily:Bacterial GAP domain
Family:Bacterial GAP domain
52c6gaoC_
not modelled 75.5 12
PDB header:viral protein
Chain: C: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail and body
53c3vkhA_
not modelled 75.3 15
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
54c4a7fB_
not modelled 74.8 8
PDB header:structural protein/hydrolase
Chain: B: PDB Molecule:tropomyosin 1 alpha;
PDBTitle: structure of the actin-tropomyosin-myosin complex (rigor atm 3)
55c6gy8B_
not modelled 74.6 12
PDB header:toxin
Chain: B: PDB Molecule:xaxa;
PDBTitle: crystal structure of xaxa from xenorhabdus nematophila
56c4ll7C_
not modelled 73.7 17
PDB header:transport protein
Chain: C: PDB Molecule:swi5-dependent ho expression protein 3;
PDBTitle: structure of she3p amino terminus.
57c5x5bB_
not modelled 72.9 17
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: prefusion structure of sars-cov spike glycoprotein, conformation 2
58c2gl2B_
not modelled 71.6 16
PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,y69g) of2 bacterial adhesin fada
59c5nmoA_
not modelled 70.2 12
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein smc,chromosome partition
PDBTitle: structure of the bacillus subtilis smc joint domain
60c4wsrA_
not modelled 70.0 18
PDB header:viral protein
Chain: A: PDB Molecule:hemagglutinin;
PDBTitle: the crystal structure of hemagglutinin form a/chicken/new york/14677-2 13/1998
61c6grjG_
not modelled 69.7 20
PDB header:toxin
Chain: G: PDB Molecule:ahlb;
PDBTitle: structure of the ahlb pore of the tripartite alpha-pore forming toxin,2 ahl, from aeromonas hydrophila.
62c5xlrC_
not modelled 69.5 17
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: structure of sars-cov spike glycoprotein
63c6nzkB_
not modelled 68.3 18
PDB header:viral protein
Chain: B: PDB Molecule:spike surface glycoprotein;
PDBTitle: structural basis for human coronavirus attachment to sialic acid2 receptors
64c5cwsC_
not modelled 67.8 12
PDB header:protein transport
Chain: C: PDB Molecule:nucleoporin nsp1;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
65c2d4yA_
not modelled 66.7 11
PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
66c5i08A_
not modelled 66.7 17
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, envelope glycoprotein chimera;
PDBTitle: prefusion structure of a human coronavirus spike protein
67c5cwsJ_
not modelled 66.5 8
PDB header:protein transport
Chain: J: PDB Molecule:nucleoporin nup49;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
68c4n21E_
not modelled 66.3 15
PDB header:viral protein
Chain: E: PDB Molecule:gp2 ectodomain;
PDBTitle: crystal structure of the gp2 core domain from the california academy2 of science virus
69c6nb3B_
not modelled 65.8 15
PDB header:virus
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: mers-cov complex with human neutralizing lca60 antibody fab fragment2 (state 1)
70c2dq0A_
not modelled 64.8 13
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog
71c5gasN_
not modelled 64.5 14
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
72c5wrgB_
not modelled 63.8 17
PDB header:virus like particle
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: sars-cov spike glycoprotein
73c3jclC_
not modelled 63.8 20
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of a coronavirus spike glycoprotein2 trimer
74c2l81A_
not modelled 63.5 15
PDB header:cell adhesion
Chain: A: PDB Molecule:enhancer of filamentation 1;
PDBTitle: solution nmr structure of the serine-rich domain of hef1 (enhancer of2 filamentation 1) from homo sapiens, northeast structural genomics3 consortium target hr5554a
75c6cv0C_
not modelled 63.4 13
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of infectious bronchitis2 coronavirus spike protein
76c2j9wB_
not modelled 62.5 12
PDB header:protein transport
Chain: B: PDB Molecule:vps28-prov protein;
PDBTitle: structural insight into the escrt-i-ii link and its role in mvb2 trafficking
77c4lwsB_
not modelled 61.8 9
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
78c6cs2A_
not modelled 61.6 16
PDB header:viral protein/hydrolase
Chain: A: PDB Molecule:spike glycoprotein,fibritin;
PDBTitle: sars spike glycoprotein - human ace2 complex, stabilized variant, all2 ace2-bound particles
79c5mg8B_
not modelled 61.6 15
PDB header:recombination
Chain: B: PDB Molecule:structural maintenance of chromosomes protein 6;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
80c3i9yA_
not modelled 61.4 14
PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: crystal structure of the v. parahaemolyticus histidine kinase sensor2 tors sensor domain
81c4fiuC_
not modelled 61.3 12
PDB header:viral protein
Chain: C: PDB Molecule:hemagglutinin;
PDBTitle: the structure of hemagglutinin of h16 subtype influenza virus with2 v327g mutation
82d1hcia4
not modelled 61.2 9
Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
83c2b9cA_
not modelled 59.8 15
PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding sites for2 actin
84c5lp5F_
not modelled 59.4 33
PDB header:hydrolase/antibiotic
Chain: F: PDB Molecule:rod shape-determining protein (mrec);
PDBTitle: complex between penicillin-binding protein (pbp2) and mrec from2 helicobacter pylori
85c5yfpD_
not modelled 58.4 19
PDB header:exocytosis
Chain: D: PDB Molecule:exocyst complex component sec8;
PDBTitle: cryo-em structure of the exocyst complex
86c4e40A_
not modelled 58.1 13
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the haptoglobin-hemoglobin receptor of trypanosoma congolense
87c2xzrA_
not modelled 56.4 7
PDB header:cell adhesion
Chain: A: PDB Molecule:immunoglobulin-binding protein eibd;
PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors
88c5j9qH_
not modelled 56.2 13
PDB header:transferase
Chain: H: PDB Molecule:chromatin modification-related protein yng2;
PDBTitle: crystal structure of the nua4 core complex
89c4iogD_
not modelled 56.2 8
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
90d2j9ua1
not modelled 56.1 14
Fold:Four-helical up-and-down bundle
Superfamily:VPS28 C-terminal domain-like
Family:VPS28 C-terminal domain-like
91c2fxmB_
not modelled 56.0 15
PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
92c3gvmA_
not modelled 55.6 16
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
93c2wr2B_
not modelled 54.2 15
PDB header:viral protein
Chain: B: PDB Molecule:hemagglutinin;
PDBTitle: structure of influenza h2 avian hemagglutinin with avian2 receptor
94c3pe0B_
not modelled 54.0 12
PDB header:structural protein
Chain: B: PDB Molecule:plectin;
PDBTitle: structure of the central region of the plakin domain of plectin
95c1mg1A_
not modelled 53.6 9
PDB header:viral protein
Chain: A: PDB Molecule:protein (htlv-1 gp21 ectodomain/maltose-binding protein
PDBTitle: htlv-1 gp21 ectodomain/maltose-binding protein chimera
96c6iiuA_
not modelled 53.6 13
PDB header:signaling protein
Chain: A: PDB Molecule:soluble cytochrome b562,thromboxane a2 receptor,rubredoxin,
PDBTitle: crystal structure of the human thromboxane a2 receptor bound to2 ramatroban
97c2j5uB_
not modelled 53.5 16
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
98c6h9xA_
not modelled 53.3 15
PDB header:ligase
Chain: A: PDB Molecule:serine--trna ligase;
PDBTitle: klebsiella pneumoniae seryl-trna synthetase in complex with the2 intermediate analog 5'-o-(n-(l-seryl)-sulfamoyl)adenosine
99c6gy6Q_
not modelled 53.3 11
PDB header:toxin
Chain: Q: PDB Molecule:xaxa;
PDBTitle: xaxab pore complex from xenorhabdus nematophila
100c3dtpA_
not modelled 52.6 14
PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and cardiac muscle;
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to tarantula2 muscle thick filament cryo-em 3d-map
101c6j9rA_
not modelled 52.6 10
PDB header:translation
Chain: A: PDB Molecule:brain tumor protein;
PDBTitle: coiled-coil domain of drosophila trim protein brat
102c2dnxA_
not modelled 52.5 16
PDB header:transport protein
Chain: A: PDB Molecule:syntaxin-12;
PDBTitle: solution structure of rsgi ruh-063, an n-terminal domain of2 syntaxin 12 from human cdna
103c2ld3A_
not modelled 51.5 17
PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: solution structure of myosin vi lever arm extension
104c2vs0B_
not modelled 51.2 17
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
105c3bt6B_
not modelled 50.7 5
PDB header:viral protein
Chain: B: PDB Molecule:influenza b hemagglutinin (ha);
PDBTitle: crystal structure of influenza b virus hemagglutinin
106c5zhyA_
not modelled 49.2 8
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, spike glycoprotein;
PDBTitle: structural characterization of the hcov-229e fusion core
107c3uunA_
not modelled 49.0 14
PDB header:structural protein
Chain: A: PDB Molecule:dystrophin;
PDBTitle: crystal structure of n-terminal first spectrin repeat of dystrophin
108c1u5pA_
not modelled 48.9 10
PDB header:structural protein
Chain: A: PDB Molecule:spectrin alpha chain, brain;
PDBTitle: crystal structure of repeats 15 and 16 of chicken brain2 alpha spectrin
109c4xa3A_
not modelled 48.2 10
PDB header:motor protein
Chain: A: PDB Molecule:gp7-myh7(1361-1425)-eb1 chimera protein;
PDBTitle: crystal structure of the coiled-coil surrounding skip 2 of myh7
110c3uulB_
not modelled 48.0 13
PDB header:structural protein
Chain: B: PDB Molecule:utrophin;
PDBTitle: crystal structure of first n-terminal utrophin spectrin repeat
111c4mc5C_
not modelled 47.9 16
PDB header:viral protein
Chain: C: PDB Molecule:hemagglutinin;
PDBTitle: crystal structure of a subtype h18 hemagglutinin homologue from2 a/flat-faced bat/peru/033/2010 (h18n11)
112c2d3eD_
not modelled 47.8 8
PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal fragment of rabbit skeletal alpha-2 tropomyosin
113c3lbxB_
not modelled 47.4 19
PDB header:structural protein
Chain: B: PDB Molecule:spectrin beta chain, erythrocyte;
PDBTitle: crystal structure of the erythrocyte spectrin tetramerization domain2 complex
114c3o4xF_
not modelled 47.0 12
PDB header:protein binding
Chain: F: PDB Molecule:protein diaphanous homolog 1;
PDBTitle: crystal structure of complex between amino and carboxy terminal2 fragments of mdia1
115c3o4xE_
not modelled 47.0 12
PDB header:protein binding
Chain: E: PDB Molecule:protein diaphanous homolog 1;
PDBTitle: crystal structure of complex between amino and carboxy terminal2 fragments of mdia1
116c6g7oA_
not modelled 46.7 13
PDB header:membrane protein
Chain: A: PDB Molecule:alkaline ceramidase 3,soluble cytochrome b562;
PDBTitle: crystal structure of human alkaline ceramidase 3 (acer3) at 2.72 angstrom resolution
117c3zbhC_
not modelled 46.5 17
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
118c2d3fD_
not modelled 45.9 50
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
119c1x1kC_
not modelled 45.9 50
PDB header:structural protein
Chain: C: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
120c2d3fF_
not modelled 45.9 50
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below