Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0592_(mce2D)_690504_692030
DateFri Jul 26 01:50:15 BST 2019
Unique Job ID43cb3e6f1b9534f9
SequenceMSTIFDIRSL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.842 Y:37.743 Z:68.181
Model (left) based on template c6ic4C_
Top template information
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence: 99.9% Coverage: 25%
127 residues ( 25% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
283 residues ( 56%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4C_
99.9 25
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5uw8C_
99.8 28
PDB header:transport protein
Chain: C: PDB Molecule:probable phospholipid abc transporter-binding protein mlad;
PDBTitle: structure of e. coli mce protein mlad, core mce domain
3c5uvnD_
99.4 20
PDB header:transport protein
Chain: D: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
4c5uvnA_
99.4 20
PDB header:transport protein
Chain: A: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
5c5uvnB_
99.4 20
PDB header:transport protein
Chain: B: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
6c5uvnF_
99.4 20
PDB header:transport protein
Chain: F: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
7c5uvnC_
99.4 20
PDB header:transport protein
Chain: C: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
8c5uvnE_
99.4 20
PDB header:transport protein
Chain: E: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
9c1qu7A_
94.1 13
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
10c3g67A_
93.6 6
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
11c2ch7A_
89.7 5
PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
12c2d4yA_
89.4 16
PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
13c6b7nC_
88.8 10
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
14c4rh7A_
87.2 11
PDB header:motor protein
Chain: A: PDB Molecule:green fluorescent protein/cytoplasmic dynein 2 heavy chain
PDBTitle: crystal structure of human cytoplasmic dynein 2 motor domain in2 complex with adp.vi
15c6gajA_
86.4 11
PDB header:viral protein
Chain: A: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail (iodide)
16c3vkhA_
83.4 14
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
17c3jclC_
79.9 11
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of a coronavirus spike glycoprotein2 trimer
18c3lnrA_
79.8 10
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
19c6ezvX_
79.8 13
PDB header:toxin
Chain: X: PDB Molecule:non-hemolytic enterotoxin lytic component l1;
PDBTitle: the cytotoxin maka from vibrio cholerae
20c3zx6A_
76.8 11
PDB header:signaling
Chain: A: PDB Molecule:hamp, methyl-accepting chemotaxis protein i;
PDBTitle: structure of hamp(af1503)-tsr fusion - hamp (a291v) mutant
21c2wpqA_
not modelled 75.8 6
PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in-2 register fusion)
22c5zuvB_
not modelled 74.3 21
PDB header:viral protein, inhibitor
Chain: B: PDB Molecule:spike glycoprotein,spike glycoprotein,inhibitor ek1;
PDBTitle: crystal structure of the human coronavirus 229e hr1 motif in complex2 with pan-covs inhibitor ek1
23c2ieqC_
not modelled 73.5 13
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
24c5u0pU_
not modelled 72.6 13
PDB header:transcription
Chain: U: PDB Molecule:mediator complex subunit 21;
PDBTitle: cryo-em structure of the transcriptional mediator
25c1deqF_
not modelled 72.1 6
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
26c3cwgA_
not modelled 71.4 6
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
27c1kmiZ_
not modelled 70.0 16
PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
28c2j5uB_
not modelled 69.5 18
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
29c4ut1A_
not modelled 69.4 9
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook-associated protein;
PDBTitle: the structure of the flagellar hook junction protein flgk2 from burkholderia pseudomallei
30c6b3oB_
not modelled 68.5 12
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: tectonic conformational changes of a coronavirus spike glycoprotein2 promote membrane fusion
31d1eq1a_
not modelled 68.1 12
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
32c1wyyB_
not modelled 66.2 11
PDB header:viral protein
Chain: B: PDB Molecule:e2 glycoprotein;
PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
33c5szsC_
not modelled 65.5 15
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: glycan shield and epitope masking of a coronavirus spike protein2 observed by cryo-electron microscopy
34c6e6aB_
not modelled 63.9 13
PDB header:protein binding
Chain: B: PDB Molecule:inclusion membrane protein a;
PDBTitle: triclinic crystal form of inca g144a point mutant
35c6nzkB_
not modelled 63.6 17
PDB header:viral protein
Chain: B: PDB Molecule:spike surface glycoprotein;
PDBTitle: structural basis for human coronavirus attachment to sialic acid2 receptors
36c5yfpD_
not modelled 63.0 14
PDB header:exocytosis
Chain: D: PDB Molecule:exocyst complex component sec8;
PDBTitle: cryo-em structure of the exocyst complex
37d1h9ma2
not modelled 62.6 28
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
38c1ei3E_
not modelled 60.0 8
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
39c5x5bB_
not modelled 57.9 15
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: prefusion structure of sars-cov spike glycoprotein, conformation 2
40d1h9ra2
not modelled 57.2 23
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
41c2qihA_
not modelled 56.5 10
PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from moraxella2 catarrhalis
42c4lwsB_
not modelled 56.2 8
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
43d1h9ma1
not modelled 56.0 13
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
44c4nl6C_
not modelled 55.3 13
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
45c6grjG_
not modelled 54.1 16
PDB header:toxin
Chain: G: PDB Molecule:ahlb;
PDBTitle: structure of the ahlb pore of the tripartite alpha-pore forming toxin,2 ahl, from aeromonas hydrophila.
46c5i08A_
not modelled 53.5 19
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, envelope glycoprotein chimera;
PDBTitle: prefusion structure of a human coronavirus spike protein
47d1wa8a1
not modelled 52.9 10
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
48c1cz5A_
not modelled 51.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:vcp-like atpase;
PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma)
49c1bf5A_
not modelled 51.5 10
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription 1-
PDBTitle: tyrosine phosphorylated stat-1/dna complex
50c3gvmA_
not modelled 51.1 17
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
51c1ei3C_
not modelled 51.0 10
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
52c5zhyA_
not modelled 50.0 17
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, spike glycoprotein;
PDBTitle: structural characterization of the hcov-229e fusion core
53c5xbjA_
not modelled 50.0 8
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar hook-associated protein flgk;
PDBTitle: the structure of the flagellar hook junction protein hap1 (flgk) from2 campylobacter jejuni
54c5wrgB_
not modelled 48.6 17
PDB header:virus like particle
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: sars-cov spike glycoprotein
55c4lwsA_
not modelled 46.7 16
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
56c3a0mF_
not modelled 46.3 17
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
57c3euhB_
not modelled 46.1 13
PDB header:cell cycle
Chain: B: PDB Molecule:chromosome partition protein mukf;
PDBTitle: crystal structure of the muke-mukf complex
58c1zvaA_
not modelled 45.9 13
PDB header:viral protein
Chain: A: PDB Molecule:e2 glycoprotein;
PDBTitle: a structure-based mechanism of sars virus membrane fusion
59c5dmaA_
not modelled 45.7 13
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent dna helicase pcra;
PDBTitle: crystal structure of c-terminal tudor domain in pcra/uvrd helicase
60c5xlrC_
not modelled 45.2 15
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: structure of sars-cov spike glycoprotein
61c3zbhC_
not modelled 44.6 12
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
62d1guta_
not modelled 44.4 12
Fold:OB-fold
Superfamily:MOP-like
Family:Molybdate/tungstate binding protein MOP
63c4e40A_
not modelled 44.0 11
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the haptoglobin-hemoglobin receptor of trypanosoma congolense
64c3ghgI_
not modelled 44.0 9
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
65c5n76C_
not modelled 43.1 23
PDB header:nickel-binding protein
Chain: C: PDB Molecule:coot;
PDBTitle: crystal structure of the apo-form of the co dehydrogenase accessory2 protein coot from rhodospirillum rubrum
66d1ykhb1
not modelled 42.7 10
Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
67c4wsrA_
not modelled 40.9 10
PDB header:viral protein
Chain: A: PDB Molecule:hemagglutinin;
PDBTitle: the crystal structure of hemagglutinin form a/chicken/new york/14677-2 13/1998
68c2p22A_
not modelled 39.2 14
PDB header:transport protein
Chain: A: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: structure of the yeast escrt-i heterotetramer core
69c1m1jA_
not modelled 37.6 9
PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
70c2yfaA_
not modelled 36.6 13
PDB header:receptor
Chain: A: PDB Molecule:methyl-accepting chemotaxis transducer;
PDBTitle: x-ray structure of mcps ligand binding domain in complex with malate
71c2vs0B_
not modelled 36.6 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
72c3fseB_
not modelled 36.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and
PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution
73d1fr3a_
not modelled 35.5 10
Fold:OB-fold
Superfamily:MOP-like
Family:Molybdate/tungstate binding protein MOP
74c3j99M_
not modelled 34.4 7
PDB header:hydrolase
Chain: M: PDB Molecule:synaptosomal-associated protein 25;
PDBTitle: structure of 20s supercomplex determined by single particle2 cryoelectron microscopy (state iiib)
75c1h9mB_
not modelled 34.1 15
PDB header:binding protein
Chain: B: PDB Molecule:molybdenum-binding-protein;
PDBTitle: two crystal structures of the cytoplasmic molybdate-binding protein2 modg suggest a novel cooperative binding mechanism and provide3 insights into ligand-binding specificity. peg-grown form with4 molybdate bound
76c1deqO_
not modelled 34.0 9
PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
77c6gaoC_
not modelled 33.9 12
PDB header:viral protein
Chain: C: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail and body
78c4iogD_
not modelled 33.8 8
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
79c3qr8A_
not modelled 33.7 25
PDB header:viral protein
Chain: A: PDB Molecule:baseplate assembly protein v;
PDBTitle: crystal structure of the bacteriophage p2 membrane-piercing protein2 gpv
80c6cs2A_
not modelled 32.9 13
PDB header:viral protein/hydrolase
Chain: A: PDB Molecule:spike glycoprotein,fibritin;
PDBTitle: sars spike glycoprotein - human ace2 complex, stabilized variant, all2 ace2-bound particles
81c1t98B_
not modelled 32.5 20
PDB header:cell cycle
Chain: B: PDB Molecule:chromosome partition protein mukf;
PDBTitle: crystal structure of mukf(1-287)
82c2qf4A_
not modelled 31.9 9
PDB header:structural protein
Chain: A: PDB Molecule:cell shape determining protein mrec;
PDBTitle: high resolution structure of the major periplasmic domain from the2 cell shape-determining filament mrec (orthorhombic form)
83c3ok8A_
not modelled 31.9 9
PDB header:protein binding
Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein
PDBTitle: i-bar of pinkbar
84c1h9sA_
not modelled 31.3 20
PDB header:transcription regulator
Chain: A: PDB Molecule:molybdenum transport protein mode;
PDBTitle: molybdate bound complex of dimop domain of mode from e.coli
85c4abxB_
not modelled 31.2 15
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair protein recn;
PDBTitle: crystal structure of deinococcus radiodurans recn coiled-2 coil domain
86d1h9ra1
not modelled 30.6 15
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
87c6gapB_
not modelled 30.4 12
PDB header:viral protein
Chain: B: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t3d reovirus sigma1 coiled coil tail and body
88c2d3hC_
not modelled 30.0 35
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
89c3a19A_
not modelled 30.0 35
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
90c5dfzA_
not modelled 29.7 11
PDB header:transferase
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 38;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
91c5tgyA_
not modelled 28.5 17
PDB header:unknown function
Chain: A: PDB Molecule:ps1;
PDBTitle: nmr structure of holo-ps1
92c3ur1C_
not modelled 28.0 5
PDB header:immune system
Chain: C: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: the structure of a ternary complex between chea domains p4 and p5 with2 chew and with a truncated fragment of tm14, a chemoreceptor analog3 from thermotoga maritima.
93c4s37F_
not modelled 27.8 15
PDB header:metal binding protein
Chain: F: PDB Molecule:phage baseplate protein;
PDBTitle: crystal structure of r2 pyocin membrane-piercing spike
94c1x1kF_
not modelled 27.6 46
PDB header:structural protein
Chain: F: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
95c4njlA_
not modelled 27.4 13
PDB header:viral protein
Chain: A: PDB Molecule:s protein;
PDBTitle: crystal structure of middle east respiratory syndrome coronavirus s22 protein fusion core
96d2cu6a1
not modelled 26.8 18
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
97c2cuoF_
not modelled 26.7 23
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
98c2cuoC_
not modelled 26.7 23
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
99c4h8sA_
not modelled 26.1 7
PDB header:signaling protein
Chain: A: PDB Molecule:dcc-interacting protein 13-beta;
PDBTitle: crystal structure of human appl2barph domain
100c1bg1A_
not modelled 25.9 10
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
101c3a19E_
not modelled 25.7 35
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
102c3a19C_
not modelled 25.7 35
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
103c2cuoE_
not modelled 25.2 19
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
104c2cuoA_
not modelled 25.2 19
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
105c2cuoD_
not modelled 25.2 19
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
106c2cuoB_
not modelled 25.2 19
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
107c3ah9C_
not modelled 25.1 19
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
108c3ah9E_
not modelled 25.1 19
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
109c3ah9B_
not modelled 25.1 19
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
110d1v5va1
not modelled 25.0 21
Fold:Elongation factor/aminomethyltransferase common domain
Superfamily:Aminomethyltransferase beta-barrel domain
Family:Aminomethyltransferase beta-barrel domain
111c5mg8B_
not modelled 24.8 8
PDB header:recombination
Chain: B: PDB Molecule:structural maintenance of chromosomes protein 6;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
112c3a35B_
not modelled 24.5 16
PDB header:luminescent protein
Chain: B: PDB Molecule:lumazine protein;
PDBTitle: crystal structure of lump complexed with riboflavin
113c3ah9A_
not modelled 24.3 20
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
114c6dlcA_
not modelled 23.9 21
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein dhd1:234_a;
PDBTitle: designed protein dhd1:234_a, designed protein dhd1:234_b
115d2vv5a1
not modelled 23.5 26
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Mechanosensitive channel protein MscS (YggB), middle domain
116c2d3hB_
not modelled 23.5 36
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
117c3a19B_
not modelled 23.5 36
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
118c2d3hA_
not modelled 23.5 36
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
119c4g2kB_
not modelled 23.4 15
PDB header:viral protein
Chain: B: PDB Molecule:general control protein gcn4, envelope glycoprotein gp2
PDBTitle: crystal structure of the marburg virus gp2 ectodomain in its post-2 fusion conformation
120c2d3hE_
not modelled 22.7 36
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below