Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0600c_(-)_697907_698413
DateFri Jul 26 01:50:16 BST 2019
Unique Job ID12f28d9d070cccad
SequenceVPITPLLHES ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.554 Y:42.299 Z:42.623
Model (left) based on template c3d2rB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4;
PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp
Confidence and coverage
Confidence:100.0% Coverage: 89%
149 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3d2rB_



100.0 18
PDB header:transferase
Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4;
PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp
2c3crlB_



100.0 18
PDB header:transferase
Chain: B: PDB Molecule:pyruvate dehydrogenase [lipoamide] kinase isozyme 2,
PDBTitle: crystal structure of the pdhk2-l2 complex.
3d1bxda_



100.0 29
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
4c4kp4B_



100.0 31
PDB header:transferase/signaling protein
Chain: B: PDB Molecule:osmolarity sensor protein envz, histidine kinase;
PDBTitle: deciphering cis-trans directionality and visualizing2 autophosphorylation in histidine kinases.
5c4i5sA_



100.0 27
PDB header:transferase
Chain: A: PDB Molecule:putative histidine kinase covs; vick-like protein;
PDBTitle: structure and function of sensor histidine kinase
6c2bu8A_



100.0 21
PDB header:transferase
Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2;
PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 2 containing2 physiological and synthetic ligands
7c2q8fA_



100.0 18
PDB header:transferase
Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1;
PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1
8c4ew8A_



100.0 30
PDB header:transferase
Chain: A: PDB Molecule:sensor protein divl;
PDBTitle: crystal structure of a c-terminal part of tyrosine kinase (divl) from2 caulobacter crescentus cb15 at 2.50 a resolution (psi community3 target, shapiro l.)
9d1id0a_



100.0 28
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
10c1y8oA_



100.0 17
PDB header:transferase
Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3;
PDBTitle: crystal structure of the pdk3-l2 complex
11c5idmA_



100.0 30
PDB header:transferase
Chain: A: PDB Molecule:cell cycle histidine kinase ccka;
PDBTitle: bifunctional histidine kinase ccka (domain, ca) in complex with c-di-2 gmp and amppnp/mg2+
12c6blkB_



100.0 31
PDB header:transferase
Chain: B: PDB Molecule:signal transduction histidine-protein kinase/phosphatase
PDBTitle: mycobacterial sensor histidine kinase mprb
13c1gjvA_



100.0 19
PDB header:transferase
Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase;
PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck) complxed with2 atp-gamma-s
14c3d36B_



100.0 24
PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:sporulation kinase b;
PDBTitle: how to switch off a histidine kinase: crystal structure of2 geobacillus stearothermophilus kinb with the inhibitor sda
15c3tz5A_



100.0 20
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase,
PDBTitle: crystal structure of branched-chain alpha-ketoacid dehydrogenase2 kinase/phenylbutyrate complex with adp
16c2c2aA_



100.0 28
PDB header:transferase
Chain: A: PDB Molecule:sensor histidine kinase;
PDBTitle: structure of the entire cytoplasmic portion of a sensor2 histidine kinase protein
17d2c2aa2



100.0 28
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
18c5idjA_



100.0 30
PDB header:transferase
Chain: A: PDB Molecule:cell cycle histidine kinase ccka;
PDBTitle: bifunctional histidine kinase ccka (domains dhp-ca) in complex with2 adp/mg2+
19c3a0tA_



100.0 21
PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: catalytic domain of histidine kinase thka (tm1359) in complex with adp2 and mg ion (trigonal)
20d1jm6a2



100.0 21
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:alpha-ketoacid dehydrogenase kinase, C-terminal domain
21c3sl2A_



not modelled 100.0 28
PDB header:transferase
Chain: A: PDB Molecule:sensor histidine kinase yycg;
PDBTitle: atp forms a stable complex with the essential histidine kinase walk2 (yycg) domain
22c4u7nA_



not modelled 100.0 32
PDB header:transferase
Chain: A: PDB Molecule:histidine protein kinase sensor protein;
PDBTitle: inactive structure of histidine kinase
23c4gczB_



not modelled 100.0 27
PDB header:signaling protein, de novo protein
Chain: B: PDB Molecule:blue-light photoreceptor, sensor protein fixl;
PDBTitle: structure of a blue-light photoreceptor
24d1gkza2



not modelled 100.0 19
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:alpha-ketoacid dehydrogenase kinase, C-terminal domain
25d1ysra1



not modelled 100.0 35
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
26c4biuB_



not modelled 100.0 28
PDB header:transferase
Chain: B: PDB Molecule:sensor protein cpxa;
PDBTitle: crystal structure of cpxahdc (orthorhombic form 1)
27c3a0rA_



not modelled 100.0 21
PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360)
28c6dk8B_



not modelled 100.0 24
PDB header:signaling protein
Chain: B: PDB Molecule:rets (regulator of exopolysaccharide and type iii
PDBTitle: rets kinase region without cobalt
29c4pl9A_



not modelled 100.0 28
PDB header:transferase
Chain: A: PDB Molecule:ethylene receptor 1;
PDBTitle: structure of the catalytic domain of etr1 from arabidopsis thaliana
30c4biyD_



not modelled 100.0 29
PDB header:transferase
Chain: D: PDB Molecule:sensor protein cpxa;
PDBTitle: crystal structure of cpxahdc (monoclinic form 2)
31d1i58a_



not modelled 99.9 24
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
32c2ch4A_



not modelled 99.9 24
PDB header:transferase/chemotaxis
Chain: A: PDB Molecule:chemotaxis protein chea;
PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew
33c1b3qA_



not modelled 99.9 22
PDB header:transferase
Chain: A: PDB Molecule:protein (chemotaxis protein chea);
PDBTitle: crystal structure of chea-289, a signal transducing histidine kinase
34d1r62a_



not modelled 99.9 23
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
35c3jz3B_



not modelled 99.9 31
PDB header:transferase
Chain: B: PDB Molecule:sensor protein qsec;
PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec
36c4gt8A_



not modelled 99.9 17
PDB header:transferase
Chain: A: PDB Molecule:sensor protein vras;
PDBTitle: crystal structure of the catalytic and atp-binding domain from vras in2 complex with adp
37c4r3aA_



not modelled 99.9 17
PDB header:signaling protein
Chain: A: PDB Molecule:blue-light-activated histidine kinase 2;
PDBTitle: erythrobacter litoralis el346 blue-light activated histidine kinase
38c4r39A_



not modelled 99.9 21
PDB header:transferase
Chain: A: PDB Molecule:blue-light-activated histidine kinase 2;
PDBTitle: histidine kinase domain from erythrobacter litoralis el346 blue-light2 activated histidine kinase
39c6nb0A_



not modelled 99.9 18
PDB header:transferase
Chain: A: PDB Molecule:histidine kinase;
PDBTitle: crystal structure of histidine kinase from burkholderia phymatum2 stm815
40c3ehgA_



not modelled 99.8 17
PDB header:transferase
Chain: A: PDB Molecule:sensor kinase (yocf protein);
PDBTitle: crystal structure of the atp-binding domain of desk in complex with2 atp
41c3zxqA_



not modelled 99.8 23
PDB header:transferase
Chain: A: PDB Molecule:hypoxia sensor histidine kinase response regulator dost;
PDBTitle: crystal structure of the atp-binding domain of mycobacterium2 tuberculosis dost
42c4fmtB_



not modelled 99.8 19
PDB header:transferase
Chain: B: PDB Molecule:chpt protein;
PDBTitle: crystal structure of a chpt protein (cc_3470) from caulobacter2 crescentus cb15 at 2.30 a resolution
43c6e95A_



not modelled 99.8 20
PDB header:signaling protein
Chain: A: PDB Molecule:staphylococcus aureus agrc histidine kinase module fused to
PDBTitle: chimeric structure of saccharomyces cerevisiae gcn4 leucine zipper2 fused to staphylococcus aureus agrc cytoplasmic histidine kinase3 module (dataset isotropically truncated by hkl2000)
44c4ctiA_



not modelled 99.8 33
PDB header:signaling protein
Chain: A: PDB Molecule:osmolarity sensor protein envz, af1503;
PDBTitle: escherichia coli envz histidine kinase catalytic part fused to2 archaeoglobus fulgidus af1503 hamp domain
45c3zxoB_



not modelled 99.8 25
PDB header:transferase
Chain: B: PDB Molecule:redox sensor histidine kinase response regulator devs;
PDBTitle: crystal structure of the mutant atp-binding domain of2 mycobacterium tuberculosis doss
46c4bxiA_



not modelled 99.8 18
PDB header:atp-binding protein
Chain: A: PDB Molecule:accessory gene regulator protein c;
PDBTitle: crystal structure of atp binding domain of agrc from2 staphylococcus aureus
47c5epvB_



not modelled 99.8 15
PDB header:transferase
Chain: B: PDB Molecule:blue-light-activated histidine kinase;
PDBTitle: histidine kinase domain from the lov-hk blue-light receptor from2 brucella abortus
48d2hkja3



not modelled 99.8 16
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
49c3gieA_



not modelled 99.7 21
PDB header:transferase
Chain: A: PDB Molecule:sensor histidine kinase desk;
PDBTitle: crystal structure of deskc_h188e in complex with amp-pcp
50c4qpkA_



not modelled 99.7 12
PDB header:signaling protein
Chain: A: PDB Molecule:phosphotransferase;
PDBTitle: 1.7 angstrom structure of a bacterial phosphotransferase
51c1mx0D_



not modelled 99.6 18
PDB header:isomerase
Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b;
PDBTitle: structure of topoisomerase subunit
52c2zbkB_



not modelled 99.6 17
PDB header:isomerase
Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b;
PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
53c2q2eB_



not modelled 99.5 20
PDB header:isomerase
Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b;
PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei
54d1h7sa2



not modelled 99.5 16
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
55d1th8a_



not modelled 99.4 23
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Histidine kinase
56d1bkna2



not modelled 99.4 19
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
57d1y8oa2



not modelled 99.3 16
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:alpha-ketoacid dehydrogenase kinase, C-terminal domain
58d1b63a2



not modelled 99.2 22
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
59c4geeA_



not modelled 98.8 21
PDB header:isomerase/isomerase inhibitor
Chain: A: PDB Molecule:dna gyrase subunit b;
PDBTitle: pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv,2 part i: structure guided discovery and optimization of dual targeting3 agents with potent, broad-spectrum enzymatic activity.
60d1ixma_



not modelled 98.8 10
Fold:Sporulation response regulatory protein Spo0B
Superfamily:Sporulation response regulatory protein Spo0B
Family:Sporulation response regulatory protein Spo0B
61c3na3A_



not modelled 98.7 21
PDB header:protein binding
Chain: A: PDB Molecule:dna mismatch repair protein mlh1;
PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens
62c4b6cB_



not modelled 98.4 24
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase subunit b,dna gyrase subunit b,dna gyrase
PDBTitle: structure of the m. smegmatis gyrb atpase domain in complex with an2 aminopyrazinamide
63c3h4lB_



not modelled 98.4 14
PDB header:dna binding protein, protein binding
Chain: B: PDB Molecule:dna mismatch repair protein pms1;
PDBTitle: crystal structure of n terminal domain of a dna repair protein
64c4emvA_



not modelled 98.2 21
PDB header:isomerase/isomerase inhibitor
Chain: A: PDB Molecule:dna topoisomerase iv, b subunit;
PDBTitle: crystal structure of a topoisomerase atp inhibitor
65c5ix1A_



not modelled 98.0 14
PDB header:transcription
Chain: A: PDB Molecule:morc family cw-type zinc finger protein 3;
PDBTitle: crystal structure of mouse morc3 atpase-cw cassette in complex with2 amppnp and h3k4me3 peptide
66c3ke6A_



not modelled 97.9 36
PDB header:unknown function
Chain: A: PDB Molecule:protein rv1364c/mt1410;
PDBTitle: the crystal structure of the rsbu and rsbw domains of rv1364c from2 mycobacterium tuberculosis
67c5ofbB_



not modelled 97.8 19
PDB header:nuclear protein
Chain: B: PDB Molecule:morc family cw-type zinc finger protein 2;
PDBTitle: crystal structure of human morc2 (residues 1-603) with spinal muscular2 atrophy mutation s87l
68c5j5pB_



not modelled 97.8 26
PDB header:isomerase/dna
Chain: B: PDB Molecule:dna topoisomerase 4 subunit b;
PDBTitle: amp-pnp-stabilized atpase domain of topoisomerase iv from2 streptococcus pneumoniae, complex type i
69d1kija2



not modelled 97.8 22
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
70c1bknA_



not modelled 97.8 21
PDB header:dna repair
Chain: A: PDB Molecule:mutl;
PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl
71c5x9yC_



not modelled 97.7 15
PDB header:dna binding protein
Chain: C: PDB Molecule:dna mismatch repair protein mutl;
PDBTitle: crystal structure of the atpase domain from bacterial mismatch repair2 endonuclease aquifex aeolicus mutl.
72d1pvga2



not modelled 97.7 18
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
73c1ea6A_



not modelled 97.6 18
PDB header:dna repair
Chain: A: PDB Molecule:pms1 protein homolog 2;
PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp
74c3iedA_



not modelled 97.6 11
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein;
PDBTitle: crystal structure of n-terminal domain of plasmodium falciparum hsp902 (pf14_0417) in complex with amppn
75d1ei1a2



not modelled 97.6 29
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
76c3zm7E_



not modelled 97.6 21
PDB header:isomerase
Chain: E: PDB Molecule:dna gyrase subunit b;
PDBTitle: crystal structure of the atpase region of mycobacterium2 tuberculosis gyrb with amppcp
77d1uyla_



not modelled 97.6 10
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Heat shock protein 90, HSP90, N-terminal domain
78d1s16a2



not modelled 97.6 23
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
79c3omuB_



not modelled 97.5 13
PDB header:chaperone
Chain: B: PDB Molecule:heat shock protein 83;
PDBTitle: crystal structure of the n-terminal domain of an hsp90 from2 trypanosoma brucei, tb10.26.1080 in the presence of a3 thienopyrimidine derivative
80c1y4sA_



not modelled 97.5 22
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein htpg;
PDBTitle: conformation rearrangement of heat shock protein 90 upon2 adp binding
81c2fwyA_



not modelled 97.5 10
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp 90-alpha;
PDBTitle: structure of human hsp90-alpha bound to the potent water2 soluble inhibitor pu-h64
82c4ipeA_



not modelled 97.5 16
PDB header:chaperone
Chain: A: PDB Molecule:tnf receptor-associated protein 1;
PDBTitle: crystal structure of mitochondrial hsp90 (trap1) with amppnp
83c1ei1B_



not modelled 97.5 28
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase b;
PDBTitle: dimerization of e. coli dna gyrase b provides a structural mechanism2 for activating the atpase catalytic center
84c2akpA_



not modelled 97.5 11
PDB header:chaperone
Chain: A: PDB Molecule:atp-dependent molecular chaperone hsp82;
PDBTitle: hsp90 delta24-n210 mutant
85c1kijB_



not modelled 97.4 22
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase subunit b;
PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin
86c4hymA_



not modelled 97.4 21
PDB header:isomerase/isomerase inhibitor
Chain: A: PDB Molecule:topoisomerase iv, subunit b;
PDBTitle: pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv,2 part i: structure guided discovery and optimization of dual targeting3 agents with potent, broad-spectrum enzymatic activity.
87d2iwxa1



not modelled 97.4 15
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Heat shock protein 90, HSP90, N-terminal domain
88c1zwhA_



not modelled 97.4 15
PDB header:chaperone
Chain: A: PDB Molecule:atp-dependent molecular chaperone hsp82;
PDBTitle: yeast hsp82 in complex with the novel hsp90 inhibitor radester amine
89d1uyma_



not modelled 97.4 12
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Heat shock protein 90, HSP90, N-terminal domain
90c1s16B_



not modelled 97.2 23
PDB header:isomerase
Chain: B: PDB Molecule:topoisomerase iv subunit b;
PDBTitle: crystal structure of e. coli topoisomerase iv pare 43kda subunit2 complexed with adpnp
91c3pehB_



not modelled 97.1 18
PDB header:chaperone
Chain: B: PDB Molecule:endoplasmin homolog;
PDBTitle: crystal structure of the n-terminal domain of an hsp90 from plasmodium2 falciparum, pfl1070c in the presence of a thienopyrimidine derivative
92c5fwkA_



not modelled 97.1 22
PDB header:signaling protein
Chain: A: PDB Molecule:heat shock protein hsp 90 beta;
PDBTitle: atomic cryoem structure of hsp90-cdc37-cdk4 complex
93c2iorA_



not modelled 97.1 17
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein htpg;
PDBTitle: crystal structure of the n-terminal domain of htpg, the2 escherichia coli hsp90, bound to adp
94c5ulsA_



not modelled 97.1 22
PDB header:chaperone
Chain: A: PDB Molecule:endoplasmin;
PDBTitle: structure of grp94 in the active conformation
95c5tthA_



not modelled 97.1 15
PDB header:chaperone
Chain: A: PDB Molecule:c-terminal spycatcher fusion of wildtype zebrafish tnf
PDBTitle: heterodimeric spycatcher/spytag-fused zebrafish trap1 in atp/adp-2 hybrid state
96c1zxnB_



not modelled 97.0 15
PDB header:isomerase
Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme;
PDBTitle: human dna topoisomerase iia atpase/adp
97c3g7bB_



not modelled 96.9 16
PDB header:isomerase/isomerase inhibitor
Chain: B: PDB Molecule:dna gyrase subunit b;
PDBTitle: staphylococcus aureus gyrase b co-complex with methyl ({5-[4-(4-2 hydroxypiperidin-1-yl)-2-phenyl-1,3-thiazol-5-yl]-1h-pyrazol-3-3 yl}methyl)carbamate inhibitor
98c1qzrA_



not modelled 96.8 18
PDB header:isomerase
Chain: A: PDB Molecule:dna topoisomerase ii;
PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane)
99c4j0bB_



not modelled 96.8 12
PDB header:chaperone
Chain: B: PDB Molecule:tnf receptor-associated protein 1;
PDBTitle: structure of mitochondrial hsp90 (trap1) with adp-bef3
100d1qy5a_



not modelled 96.7 17
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Heat shock protein 90, HSP90, N-terminal domain
101d2gqpa1



not modelled 96.7 17
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:Heat shock protein 90, HSP90, N-terminal domain
102c2cg9A_



not modelled 96.6 12
PDB header:chaperone
Chain: A: PDB Molecule:atp-dependent molecular chaperone hsp82;
PDBTitle: crystal structure of an hsp90-sba1 closed chaperone complex
103c2iopD_



not modelled 96.6 17
PDB header:chaperone
Chain: D: PDB Molecule:chaperone protein htpg;
PDBTitle: crystal structure of full-length htpg, the escherichia coli2 hsp90, bound to adp
104d1s14a_



not modelled 96.5 24
Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family:DNA gyrase/MutL, N-terminal domain
105c4gfhA_



not modelled 96.4 17
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 2;
PDBTitle: topoisomerase ii-dna-amppnp complex
106c3lnuA_



not modelled 96.1 24
PDB header:isomerase
Chain: A: PDB Molecule:topoisomerase iv subunit b;
PDBTitle: crystal structure of pare subunit
107c2o1wB_



not modelled 95.6 24
PDB header:chaperone
Chain: B: PDB Molecule:endoplasmin;
PDBTitle: structure of n-terminal plus middle domains (n+m) of grp94
108c2o1uA_



not modelled 94.0 24
PDB header:chaperone
Chain: A: PDB Molecule:endoplasmin;
PDBTitle: structure of full length grp94 with amp-pnp bound
109c6gauB_



not modelled 88.0 22
PDB header:dna binding protein
Chain: B: PDB Molecule:dna gyrase subunit b,dna gyrase subunit a;
PDBTitle: extremely 'open' clamp structure of dna gyrase: role of the2 corynebacteriales gyrb specific insert
110c3cwvB_



not modelled 80.9 14
PDB header:isomerase
Chain: B: PDB Molecule:dna gyrase, b subunit, truncated;
PDBTitle: crystal structure of b-subunit of the dna gyrase from myxococcus2 xanthus
111d1wmaa1



not modelled 59.2 36
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
112c4i3hA_



not modelled 56.2 25
PDB header:isomerase/dna
Chain: A: PDB Molecule:topoisomerase iv subunit b, dna topoisomerase 4 subunit a
PDBTitle: a three-gate structure of topoisomerase iv from streptococcus2 pneumoniae
113c4ldnA_



not modelled 35.7 18
PDB header:transferase
Chain: A: PDB Molecule:purine nucleoside phosphorylase deod-type;
PDBTitle: crystal structure of a putative purine nucleoside phosphorylase from2 vibrio fischeri es114 (target nysgrc-029521)
114c4ggoA_



not modelled 35.6 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:trans-2-enoyl-coa reductase;
PDBTitle: crystal structure of trans-2-enoyl-coa reductase from treponema2 denticola
115c4fd3D_



not modelled 23.6 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase;
PDBTitle: crystal structure of apo-formed ymtoar1
116c3tfoD_



not modelled 23.5 21
PDB header:oxidoreductase
Chain: D: PDB Molecule:putative 3-oxoacyl-(acyl-carrier-protein) reductase;
PDBTitle: crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein)2 reductase from sinorhizobium meliloti
117d2o23a1



not modelled 21.9 38
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
118c3nywD_



not modelled 21.6 30
PDB header:oxidoreductase
Chain: D: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a betaketoacyl-[acp] reductase (fabg) from2 bacteroides thetaiotaomicron
119d1spxa_



not modelled 21.3 21
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
120d1odka_



not modelled 20.9 16
Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite