Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0609A_(-)_703833_704060
DateFri Jul 26 01:50:17 BST 2019
Unique Job ID9b5f13c6e5d4098d
SequenceVEGQRLWAHR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.330 Y:41.685 Z:31.981
Model (left) based on template c4k7gD_
Top template information
PDB header:isomerase
Chain: D: PDB Molecule:3-hydroxyproline dehydratse;
PDBTitle: crystal structure of a 3-hydroxyproline dehydratse from agrobacterium2 vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered3 active site
Confidence and coverage
Confidence: 26.1% Coverage: 45%
34 residues ( 45% of your sequence) have been modelled with 26.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4k7gD_



26.1 29
PDB header:isomerase
Chain: D: PDB Molecule:3-hydroxyproline dehydratse;
PDBTitle: crystal structure of a 3-hydroxyproline dehydratse from agrobacterium2 vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered3 active site
2c4lb0B_



12.4 35
PDB header:isomerase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hydroxyproline epimerase from agrobacterium2 vitis, target efi-506420, with bound trans-4-oh-l-proline
3c6ijoG_



11.6 44
PDB header:photosynthesis
Chain: G: PDB Molecule:psag;
PDBTitle: photosystem i of chlamydomonas reinhardtii
4c2wsfG_



11.3 28
PDB header:photosynthesis
Chain: G: PDB Molecule:photosystem i reaction center subunit v, chloroplastic;
PDBTitle: improved model of plant photosystem i
5c3lw5K_



11.0 39
PDB header:photosynthesis
Chain: K: PDB Molecule:photosystem i reaction center subunit x psak;
PDBTitle: improved model of plant photosystem i
6d1f07a_



10.4 17
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:F420 dependent oxidoreductases
7c2wscK_



9.8 39
PDB header:photosynthesis
Chain: K: PDB Molecule:photosystem i reaction center subunit psak, chloroplastic;
PDBTitle: improved model of plant photosystem i
8c5zjiO_



9.4 33
PDB header:membrane protein
Chain: O: PDB Molecule:16kda membrane protein;
PDBTitle: structure of photosystem i supercomplex with light-harvesting2 complexes i and ii
9d1rhca_



9.2 25
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:F420 dependent oxidoreductases
10c2o01F_



9.2 48
PDB header:photosynthesis
Chain: F: PDB Molecule:photosystem i reaction center subunit iii, chloroplast;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution
11c6ijjK_



9.0 44
PDB header:membrane protein
Chain: K: PDB Molecule:psak;
PDBTitle: photosystem i of chlamydomonas reinhardtii
12d1kqfb2



8.0 46
Fold:Single transmembrane helix
Superfamily:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
Family:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
13c2wsfF_



7.8 48
PDB header:photosynthesis
Chain: F: PDB Molecule:photosystem i reaction center subunit iii, chloroplastic;
PDBTitle: improved model of plant photosystem i
14c2nv2U_



6.7 38
PDB header:lyase/transferase
Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
15c1z69D_



6.7 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:coenzyme f420-dependent n(5),n(10)-
PDBTitle: crystal structure of methylenetetrahydromethanopterin2 reductase (mer) in complex with coenzyme f420
16c6igzK_



6.5 39
PDB header:plant protein
Chain: K: PDB Molecule:psak;
PDBTitle: structure of psi-lhci
17c5w9pI_



6.4 30
PDB header:viral protein
Chain: I: PDB Molecule:spike glycoprotein;
PDBTitle: mers s ectodomain trimer in complex with variable domain of2 neutralizing antibody g4
18d2nsfa2



6.3 28
Fold:SCP-like
Superfamily:SCP-like
Family:Micothiol-dependent maleylpyruvate isomerase C-terminal domain-like
19c3c8nB_



6.2 26
PDB header:oxidoreductase
Chain: B: PDB Molecule:probable f420-dependent glucose-6-phosphate dehydrogenase
PDBTitle: crystal structure of apo-fgd1 from mycobacterium tuberculosis
20c1cagC_



6.0 53
PDB header:collagen
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
21c1cagA_



not modelled 6.0 53
PDB header:collagen
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
22c5kzoA_



not modelled 5.4 53
PDB header:transcription
Chain: A: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: notch1 transmembrane and associated juxtamembrane segment
23c4l67B_



not modelled 5.3 75
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase pak 4;
PDBTitle: crystal structure of catalytic domain of pak4
24c2hw2A_



not modelled 5.2 47
PDB header:transferase
Chain: A: PDB Molecule:rifampin adp-ribosyl transferase;
PDBTitle: crystal structure of rifampin adp-ribosyl transferase in complex with2 rifampin
25c1cgdB_



not modelled 5.1 56
PDB header:collagen
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: hydration structure of a collagen peptide
26c1cagB_



not modelled 5.1 56
PDB header:collagen
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
27c1cgdC_



not modelled 5.1 56
PDB header:collagen
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: hydration structure of a collagen peptide

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