1 c4xgqD_ 
 
94.3 
100 
PDB header: toxin/antitoxinChain:  D: PDB Molecule: antitoxin vapb30;PDBTitle:  crystal structure of addiction module from mycobacterial species
2 c4xgqB_ 
 
94.1 
100 
PDB header: toxin/antitoxinChain:  B: PDB Molecule: antitoxin vapb30;PDBTitle:  crystal structure of addiction module from mycobacterial species
3 c6a7vU_ 
 
84.6 
35 
PDB header: toxin/antitoxinChain:  U: PDB Molecule: antitoxin vapb11;PDBTitle:  crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
4 c4xgrH_ 
 
79.4 
100 
PDB header: toxin/antitoxinChain:  H: PDB Molecule: antitoxin vapb30;PDBTitle:  crystal structure of addiction module from mycobacterial species
5 c6iyaD_ 
 
67.3 
23 
PDB header: antitoxinChain:  D: PDB Molecule: transcriptional regulator copg family;PDBTitle:  structure of the dna binding domain of antitoxin copaso
6 c4xgrF_ 
 
67.0 
100 
PDB header: toxin/antitoxinChain:  F: PDB Molecule: antitoxin vapb30;PDBTitle:  crystal structure of addiction module from mycobacterial species
7 c2k5jB_ 
 
63.3 
12 
PDB header: structural genomics, unknown functionChain:  B: PDB Molecule: uncharacterized protein yiif;PDBTitle:  solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
8 c6gtsC_ 
 
63.2 
15 
PDB header: transcriptionChain:  C: PDB Molecule: duf1778 domain-containing protein;PDBTitle:  structure of the atat-atar complex bound dna
9 c6ajnF_ 
 
56.4 
17 
PDB header: toxinChain:  F: PDB Molecule: duf1778 domain-containing protein;PDBTitle:  crystal structure of atatr bound with accoa
10 c2kelB_ 
 
51.9 
40 
PDB header: transcription repressorChain:  B: PDB Molecule: uncharacterized protein 56b;PDBTitle:  structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1
11 d1y9ba1 
 
42.3 
20 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: VCA0319-like
12 c4q2uM_ 
 
42.2 
18 
PDB header: toxin/toxin repressorChain:  M: PDB Molecule: antitoxin dinj;PDBTitle:  crystal structure of the e. coli dinj-yafq toxin-antitoxin complex
13 c2q2kB_ 
 
26.0 
25 
PDB header: dna binding protein/dnaChain:  B: PDB Molecule: hypothetical protein;PDBTitle:  structure of nucleic-acid binding protein
14 c2q2kA_ 
 
24.9 
24 
PDB header: dna binding protein/dnaChain:  A: PDB Molecule: hypothetical protein;PDBTitle:  structure of nucleic-acid binding protein
15 c2rbfB_ 
 
22.6 
13 
PDB header: oxidoreductase/dnaChain:  B: PDB Molecule: bifunctional protein puta;PDBTitle:  structure of the ribbon-helix-helix domain of escherichia coli puta2 (puta52) complexed with operator dna (o2)
16 d2hzaa1 
 
18.2 
20 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
17 d2bsqe1 
 
16.0 
16 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Trafficking protein A-like
18 c2xc7A_ 
 
15.9 
14 
PDB header: rna binding proteinChain:  A: PDB Molecule: phosphorylated adapter rna export protein;PDBTitle:  solution structure of phax-rbd in complex with ssrna
19 d1myla_ 
 
15.6 
21 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
20 c2k9iB_ 
 
15.5 
23 
PDB header: dna binding proteinChain:  B: PDB Molecule: uncharacterized protein orf56;PDBTitle:  nmr structure of plasmid copy control protein orf56 from sulfolobus2 islandicus
21 c2h1oH_ 
 
not modelled 
14.9 
16 
PDB header: gene regulation/dna complexChain:  H: PDB Molecule: trafficking protein a;PDBTitle:  structure of fitab bound to ir36 dna fragment
22 d1mnta_ 
 
not modelled 
14.2 
13 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
23 d2gg2a1 
 
not modelled 
13.3 
30 
Fold: Creatinase/aminopeptidaseSuperfamily: Creatinase/aminopeptidaseFamily: Creatinase/aminopeptidase
24 d1u9pa1 
 
not modelled 
12.1 
21 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
25 c5h64b_ 
 
not modelled 
11.0 
23 
PDB header: transferaseChain:  B: PDB Molecule: regulatory-associated protein of mtor;PDBTitle:  cryo-em structure of mtorc1
26 d2bj7a1 
 
not modelled 
10.8 
17 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
27 d1q9ja2 
 
not modelled 
10.7 
16 
Fold: CoA-dependent acyltransferasesSuperfamily: CoA-dependent acyltransferasesFamily: NRPS condensation domain (amide synthase)
28 d1myka_ 
 
not modelled 
10.6 
21 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
29 c3m92B_ 
 
not modelled 
10.5 
63 
PDB header: structural genomics, unknown functionChain:  B: PDB Molecule: protein ycin;PDBTitle:  the structure of ycin, an unchracterized protein from shigella2 flexneri.
30 d1bdta_ 
 
not modelled 
10.4 
21 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
31 c1wkbA_ 
 
not modelled 
10.4 
25 
PDB header: ligaseChain:  A: PDB Molecule: leucyl-trna synthetase;PDBTitle:  crystal structure of leucyl-trna synthetase from the2 archaeon pyrococcus horikoshii reveals a novel editing3 domain orientation
32 c4zp3M_ 
 
not modelled 
10.3 
19 
PDB header: signaling proteinChain:  M: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
33 c4zp3N_ 
 
not modelled 
9.7 
21 
PDB header: signaling proteinChain:  N: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
34 d1baza_ 
 
not modelled 
9.7 
21 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
35 d1mylb_ 
 
not modelled 
9.7 
22 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
36 c4ariA_ 
 
not modelled 
9.2 
63 
PDB header: ligase/rnaChain:  A: PDB Molecule: leucine--trna ligase;PDBTitle:  ternary complex of e. coli leucyl-trna synthetase, trna(leu) and the2 benzoxaborole an2679 in the editing conformation
37 c2xpiE_ 
 
not modelled 
9.2 
35 
PDB header: cell cycleChain:  E: PDB Molecule: anaphase-promoting complex subunit hcn1 hcn1/cdc26,20sPDBTitle:  crystal structure of apc/c hetero-tetramer cut9-hcn1
38 c4zp3R_ 
 
not modelled 
9.1 
21 
PDB header: signaling proteinChain:  R: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
39 c4zp3Q_ 
 
not modelled 
9.1 
21 
PDB header: signaling proteinChain:  Q: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
40 c4zp3O_ 
 
not modelled 
8.8 
21 
PDB header: signaling proteinChain:  O: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
41 c5bs7F_ 
 
not modelled 
8.8 
67 
PDB header: transcription regulatorChain:  F: PDB Molecule: protein spt2 homolog;PDBTitle:  structure of histone h3/h4 in complex with spt2
42 c4qvrA_ 
 
not modelled 
8.7 
33 
PDB header: unknown functionChain:  A: PDB Molecule: uncharacterized hypothetical protein ftt_1539c;PDBTitle:  2.3 angstrom crystal structure of hypothetical protein ftt1539c from2 francisella tularensis.
43 c5bsaF_ 
 
not modelled 
8.6 
67 
PDB header: transcription regulatorChain:  F: PDB Molecule: protein spt2 homolog;PDBTitle:  structure of histone h3/h4 in complex with spt2
44 c2xpiB_ 
 
not modelled 
8.5 
35 
PDB header: cell cycleChain:  B: PDB Molecule: anaphase-promoting complex subunit hcn1 hcn1/cdc26,20sPDBTitle:  crystal structure of apc/c hetero-tetramer cut9-hcn1
45 c5h7pB_ 
 
not modelled 
8.4 
30 
PDB header: protein transportChain:  B: PDB Molecule: vacuolar protein-sorting-associated protein 46;PDBTitle:  nmr structure of the vta1ntd-did2(176-204) complex
46 c2hs5A_ 
 
not modelled 
8.3 
15 
PDB header: transcription regulatorChain:  A: PDB Molecule: putative transcriptional regulator gntr;PDBTitle:  structural genomics, the crystal structure of a putative2 transcriptional regulator gntr from rhodococcus sp. rha1
47 d1p94a_ 
 
not modelled 
8.2 
24 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
48 c4fo7B_ 
 
not modelled 
8.1 
22 
PDB header: hydrolaseChain:  B: PDB Molecule: methionine aminopeptidase;PDBTitle:  pseudomonas aeruginosa metap, in mn form
49 d1cuka1 
 
not modelled 
8.1 
33 
Fold: RuvA C-terminal domain-likeSuperfamily: DNA helicase RuvA subunit, C-terminal domainFamily: DNA helicase RuvA subunit, C-terminal domain
50 c3um2B_ 
 
not modelled 
8.0 
56 
PDB header: membrane protein/transport proteinChain:  B: PDB Molecule: charged multivesicular body protein 5;PDBTitle:  crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
51 c3um1E_ 
 
not modelled 
8.0 
56 
PDB header: membrane protein/transport proteinChain:  E: PDB Molecule: charged multivesicular body protein 5;PDBTitle:  crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
52 c3um2E_ 
 
not modelled 
8.0 
56 
PDB header: membrane protein/transport proteinChain:  E: PDB Molecule: charged multivesicular body protein 5;PDBTitle:  crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
53 c3um0B_ 
 
not modelled 
8.0 
56 
PDB header: membrane protein/transport proteinChain:  B: PDB Molecule: charged multivesicular body protein 5;PDBTitle:  crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
54 c3sztB_ 
 
not modelled 
7.9 
19 
PDB header: transcriptionChain:  B: PDB Molecule: quorum-sensing control repressor;PDBTitle:  quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
55 d2a4da1 
 
not modelled 
7.8 
28 
Fold: UBC-likeSuperfamily: UBC-likeFamily: UBC-related
56 c2bj3D_ 
 
not modelled 
7.8 
16 
PDB header: transcriptionChain:  D: PDB Molecule: nickel responsive regulator;PDBTitle:  nikr-apo
57 c2k29A_ 
 
not modelled 
7.6 
24 
PDB header: transcriptionChain:  A: PDB Molecule: antitoxin relb;PDBTitle:  structure of the dbd domain of e. coli antitoxin relb
58 c1h0mD_ 
 
not modelled 
7.6 
16 
PDB header: transcription/dnaChain:  D: PDB Molecule: transcriptional activator protein trar;PDBTitle:  three-dimensional structure of the quorum sensing protein trar bound2 to its autoinducer and to its target dna
59 c5ydcA_ 
 
not modelled 
7.4 
37 
PDB header: transcription regulatorChain:  A: PDB Molecule: uncharacterized hth-type transcriptional regulator rv1828;PDBTitle:  crystal structure of mercury soaked c-terminal domain of rv1828 from2 mycobacterium tuberculosis
60 c4zp3P_ 
 
not modelled 
7.4 
19 
PDB header: signaling proteinChain:  P: PDB Molecule: a-kinase anchor protein 7 isoforms alpha and beta;PDBTitle:  akap18:pka-riialpha structure reveals crucial anchor points for2 recognition of regulatory subunits of pka
61 c4egcA_ 
 
not modelled 
7.3 
50 
PDB header: transcription/hydrolaseChain:  A: PDB Molecule: maltose-binding periplasmic protein, homeobox protein six1PDBTitle:  crystal structure of mbp-fused human six1 bound to human eya2 eya2 domain
62 c1wz2B_ 
 
not modelled 
7.2 
20 
PDB header: ligase/rnaChain:  B: PDB Molecule: leucyl-trna synthetase;PDBTitle:  the crystal structure of leucyl-trna synthetase and trna(leucine)2 complex
63 d2hzab1 
 
not modelled 
7.2 
23 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
64 d1riqa1 
 
not modelled 
7.1 
14 
Fold: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)Superfamily: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)Family: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
65 d1b28a_ 
 
not modelled 
7.1 
22 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
66 d1o0xa_ 
 
not modelled 
7.1 
19 
Fold: Creatinase/aminopeptidaseSuperfamily: Creatinase/aminopeptidaseFamily: Creatinase/aminopeptidase
67 c4lfuA_ 
 
not modelled 
7.1 
16 
PDB header: dna binding proteinChain:  A: PDB Molecule: regulatory protein sdia;PDBTitle:  crystal structure of escherichia coli sdia in the space group c2
68 c2ml7A_ 
 
not modelled 
7.0 
50 
PDB header: unknown functionChain:  A: PDB Molecule: specific abundant protein 3;PDBTitle:  ginsentides: characterization, structure and application of a new2 class of highly stable cystine knot peptides in ginseng
69 c2mdvB_ 
 
not modelled 
6.9 
32 
PDB header: de novo proteinChain:  B: PDB Molecule: designed protein;PDBTitle:  nmr structure of beta alpha alpha 38
70 c3hxxA_ 
 
not modelled 
6.7 
24 
PDB header: ligaseChain:  A: PDB Molecule: alanyl-trna synthetase;PDBTitle:  crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp
71 c1qu2A_ 
 
not modelled 
6.6 
50 
PDB header: ligase/rnaChain:  A: PDB Molecule: isoleucyl-trna synthetase;PDBTitle:  insights into editing from an ile-trna synthetase structure2 with trna(ile) and mupirocin
72 c3gkuB_ 
 
not modelled 
6.6 
53 
PDB header: rna binding proteinChain:  B: PDB Molecule: probable rna-binding protein;PDBTitle:  crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
73 c5ah5B_ 
 
not modelled 
6.6 
63 
PDB header: ligase/rnaChain:  B: PDB Molecule: leucine--trna ligase;PDBTitle:  crystal structure of the ternary complex of agrobacterium2 radiobacter k84 agnb2 leurs-trna-leuams
74 c3o0lB_ 
 
not modelled 
6.5 
43 
PDB header: structural genomics, unknown functionChain:  B: PDB Molecule: uncharacterized protein;PDBTitle:  crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution
75 c5ca8A_ 
 
not modelled 
6.5 
50 
PDB header: hydrolaseChain:  A: PDB Molecule: protein sey1;PDBTitle:  structures of the yeast dynamin-like gtpase sey1p in complex with gdp
76 d1bazb_ 
 
not modelled 
6.5 
22 
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
77 d1efva2 
 
not modelled 
6.4 
28 
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: C-terminal domain of the electron transfer flavoprotein alpha subunit
78 c2ca9B_ 
 
not modelled 
6.3 
17 
PDB header: transcriptionChain:  B: PDB Molecule: putative nickel-responsive regulator;PDBTitle:  apo-nikr from helicobacter pylori in closed trans-2 conformation
79 c4p9fA_ 
 
not modelled 
6.2 
35 
PDB header: transcriptionChain:  A: PDB Molecule: hth-type transcriptional regulator mcbr;PDBTitle:  e. coli mcbr/yncc
80 c3qp5C_ 
 
not modelled 
6.2 
16 
PDB header: transcriptionChain:  C: PDB Molecule: cvir transcriptional regulator;PDBTitle:  crystal structure of cvir bound to antagonist chlorolactone (cl)
81 c6q8aA_ 
 
not modelled 
5.9 
50 
PDB header: ligaseChain:  A: PDB Molecule: leucine--trna ligase;PDBTitle:  neisseria gonorrhoeae leucyl-trna synthetase in complex with 5'-o-(n-2 (l-leucyl)-sulfamoyl)cytidine
82 c1yx3A_ 
 
not modelled 
5.8 
24 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: hypothetical protein dsrc;PDBTitle:  nmr structure of allochromatium vinosum dsrc: northeast2 structural genomics consortium target op4
83 c4v1af_ 
 
not modelled 
5.7 
16 
PDB header: ribosomeChain:  F: PDB Molecule: PDBTitle:  structure of the large subunit of the mammalian mitoribosome, part 22 of 2
84 c5vgtA_ 
 
not modelled 
5.5 
70 
PDB header: viral proteinChain:  A: PDB Molecule: gene 7 protein;PDBTitle:  x-ray structure of bacteriophage sf6 tail adaptor protein gp7
85 c3tavA_ 
 
not modelled 
5.5 
13 
PDB header: hydrolaseChain:  A: PDB Molecule: methionine aminopeptidase;PDBTitle:  crystal structure of a methionine aminopeptidase from mycobacterium2 abscessus
86 d1efpa2 
 
not modelled 
5.5 
22 
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: C-terminal domain of the electron transfer flavoprotein alpha subunit
87 d1mula_ 
 
not modelled 
5.5 
24 
Fold: IHF-like DNA-binding proteinsSuperfamily: IHF-like DNA-binding proteinsFamily: Prokaryotic DNA-bending protein
88 c2kvcA_ 
 
not modelled 
5.4 
16 
PDB header: unknown functionChain:  A: PDB Molecule: putative uncharacterized protein;PDBTitle:  solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
89 c1zvvA_ 
 
not modelled 
5.3 
14 
PDB header: transcription/dnaChain:  A: PDB Molecule: glucose-resistance amylase regulator;PDBTitle:  crystal structure of a ccpa-crh-dna complex
90 c2bytD_ 
 
not modelled 
5.2 
63 
PDB header: synthetaseChain:  D: PDB Molecule: leucyl-trna synthetase;PDBTitle:  thermus thermophilus leucyl-trna synthetase complexed with2 a trnaleu transcript in the post-editing conformation
91 c3iwfA_ 
 
not modelled 
5.2 
11 
PDB header: transcription regulatorChain:  A: PDB Molecule: transcription regulator rpir family;PDBTitle:  the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
92 c3utmC_ 
 
not modelled 
5.1 
29 
PDB header: transferase/signaling proteinChain:  C: PDB Molecule: axin-1;PDBTitle:  crystal structure of a mouse tankyrase-axin complex
93 c2l8nA_ 
 
not modelled 
5.1 
7 
PDB header: transcription regulatorChain:  A: PDB Molecule: transcriptional repressor cytr;PDBTitle:  nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
94 d1ef1c_ 
 
not modelled 
5.0 
17 
Fold: Non-globular all-alpha subunits of globular proteinsSuperfamily: Moesin tail domainFamily: Moesin tail domain
95 c5bsaE_ 
 
not modelled 
5.0 
50 
PDB header: transcription regulatorChain:  E: PDB Molecule: protein spt2 homolog;PDBTitle:  structure of histone h3/h4 in complex with spt2
96 c2akfB_ 
 
not modelled 
5.0 
54 
PDB header: protein bindingChain:  B: PDB Molecule: coronin-1a;PDBTitle:  crystal structure of the coiled-coil domain of coronin 1
97 c2akfA_ 
 
not modelled 
5.0 
54 
PDB header: protein bindingChain:  A: PDB Molecule: coronin-1a;PDBTitle:  crystal structure of the coiled-coil domain of coronin 1