Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0625c_(-)_717156_717896
DateFri Jul 26 01:50:18 BST 2019
Unique Job IDa4864398c3871df3
SequenceMSTHNDSAPT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.186 Y:41.901 Z:43.127
Model (left) based on template c5d7tC_
Top template information
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
Confidence and coverage
Confidence: 90.5% Coverage: 48%
119 residues ( 48% of your sequence) have been modelled with 90.5% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5d7tC_



90.5 14
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
2c4huqS_



87.2 18
PDB header:hydrolase
Chain: S: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a transporter
3c4z7fD_



76.5 11
PDB header:transport protein
Chain: D: PDB Molecule:folate ecf transporter;
PDBTitle: crystal structure of folt bound with folic acid
4c3p5nA_



63.9 19
PDB header:transport protein
Chain: A: PDB Molecule:riboflavin uptake protein;
PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter
5c6nbxG_



43.0 18
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
6c1ciiA_



32.9 11
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
7c3nd0A_



27.9 15
PDB header:transport protein
Chain: A: PDB Molecule:sll0855 protein;
PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter
8c5n9yB_



26.8 12
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
9d1otsa_



26.4 18
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel
10c4dveA_



26.1 12
PDB header:transport protein
Chain: A: PDB Molecule:biotin transporter bioy;
PDBTitle: crystal structure at 2.1 a of the s-component for biotin from an ecf-2 type abc transporter
11c6humB_



22.3 11
PDB header:proton transport
Chain: B: PDB Molecule:nad(p)h-quinone oxidoreductase subunit 2;
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
12c4ezdB_



19.4 19
PDB header:transport protein
Chain: B: PDB Molecule:urea transporter 1;
PDBTitle: crystal structure of the ut-b urea transporter from bos taurus bound2 to selenourea
13c4ev6E_



17.2 7
PDB header:metal transport
Chain: E: PDB Molecule:magnesium transport protein cora;
PDBTitle: the complete structure of cora magnesium transporter from2 methanocaldococcus jannaschii
14c4m5bA_



16.7 12
PDB header:membrane protein
Chain: A: PDB Molecule:cobalamin biosynthesis protein cbim;
PDBTitle: crystal structure of an truncated transition metal transporter
15c2b2hA_



16.4 10
PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter;
PDBTitle: ammonium transporter amt-1 from a. fulgidus (as)
16c4m5cA_



16.3 12
PDB header:membrane protein
Chain: A: PDB Molecule:cobalamin biosynthesis protein cbim;
PDBTitle: crystal structure of an truncated transition metal transporter
17c2n28A_



13.2 19
PDB header:viral protein
Chain: A: PDB Molecule:protein vpu;
PDBTitle: solid-state nmr structure of vpu
18c6hqeu_



12.7 75
PDB header:protein fibril
Chain: U: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
19c6hqeQ_



12.7 75
PDB header:protein fibril
Chain: Q: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
20c6hqeU_



12.7 75
PDB header:protein fibril
Chain: U: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
21c6hqeC_



not modelled 12.7 75
PDB header:protein fibril
Chain: C: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
22c6hqel_



not modelled 12.7 75
PDB header:protein fibril
Chain: L: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
23c6hqee_



not modelled 12.7 75
PDB header:protein fibril
Chain: E: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
24c6hqeJ_



not modelled 12.7 75
PDB header:protein fibril
Chain: J: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
25c6hqez_



not modelled 12.7 75
PDB header:protein fibril
Chain: Z: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
26c6hqeS_



not modelled 12.7 75
PDB header:protein fibril
Chain: S: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
27c6hqeX_



not modelled 12.7 75
PDB header:protein fibril
Chain: X: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
28c6hqea_



not modelled 12.7 75
PDB header:protein fibril
Chain: A: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
29c6hqec_



not modelled 12.7 75
PDB header:protein fibril
Chain: C: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
30c6hqeb_



not modelled 12.7 75
PDB header:protein fibril
Chain: B: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
31c6hqeO_



not modelled 12.7 75
PDB header:protein fibril
Chain: O: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
32c6hqeL_



not modelled 12.7 75
PDB header:protein fibril
Chain: L: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
33c6hqeE_



not modelled 12.7 75
PDB header:protein fibril
Chain: E: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
34c6hqew_



not modelled 12.7 75
PDB header:protein fibril
Chain: W: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
35c6hqej_



not modelled 12.7 75
PDB header:protein fibril
Chain: J: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
36c6hqep_



not modelled 12.7 75
PDB header:protein fibril
Chain: P: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
37c6hqeh_



not modelled 12.7 75
PDB header:protein fibril
Chain: H: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
38c6hqeV_



not modelled 12.7 75
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
39c6hqey_



not modelled 12.7 75
PDB header:protein fibril
Chain: Y: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
40c6hqes_



not modelled 12.7 75
PDB header:protein fibril
Chain: S: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
41c6hqeH_



not modelled 12.7 75
PDB header:protein fibril
Chain: H: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
42c6hqeP_



not modelled 12.7 75
PDB header:protein fibril
Chain: P: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
43c6hqeA_



not modelled 12.7 75
PDB header:protein fibril
Chain: A: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
44c6hqen_



not modelled 12.7 75
PDB header:protein fibril
Chain: N: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
45c6hqeK_



not modelled 12.7 75
PDB header:protein fibril
Chain: K: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
46c6hqeg_



not modelled 12.7 75
PDB header:protein fibril
Chain: G: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
47c6hqex_



not modelled 12.7 75
PDB header:protein fibril
Chain: X: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
48c6hqef_



not modelled 12.7 75
PDB header:protein fibril
Chain: F: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
49c6hqeF_



not modelled 12.7 75
PDB header:protein fibril
Chain: F: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
50c6hqet_



not modelled 12.7 75
PDB header:protein fibril
Chain: T: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
51c6hqek_



not modelled 12.7 75
PDB header:protein fibril
Chain: K: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
52c6hqeD_



not modelled 12.7 75
PDB header:protein fibril
Chain: D: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
53c6hqeM_



not modelled 12.7 75
PDB header:protein fibril
Chain: M: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
54c6hqeR_



not modelled 12.7 75
PDB header:protein fibril
Chain: R: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
55c6hqeI_



not modelled 12.7 75
PDB header:protein fibril
Chain: I: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
56c6hqem_



not modelled 12.7 75
PDB header:protein fibril
Chain: M: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
57c6hqeq_



not modelled 12.7 75
PDB header:protein fibril
Chain: Q: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
58c6hqeB_



not modelled 12.7 75
PDB header:protein fibril
Chain: B: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
59c6hqer_



not modelled 12.7 75
PDB header:protein fibril
Chain: R: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
60c6hqeW_



not modelled 12.7 75
PDB header:protein fibril
Chain: W: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
61c6hqeZ_



not modelled 12.7 75
PDB header:protein fibril
Chain: Z: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
62c6hqeT_



not modelled 12.7 75
PDB header:protein fibril
Chain: T: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
63c6hqeY_



not modelled 12.7 75
PDB header:protein fibril
Chain: Y: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
64c6hqed_



not modelled 12.7 75
PDB header:protein fibril
Chain: D: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
65c6hqeo_



not modelled 12.7 75
PDB header:protein fibril
Chain: O: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
66c6hqeN_



not modelled 12.7 75
PDB header:protein fibril
Chain: N: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
67c6hqeG_



not modelled 12.7 75
PDB header:protein fibril
Chain: G: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
68c6hqei_



not modelled 12.7 75
PDB header:protein fibril
Chain: I: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
69c6hqev_



not modelled 12.7 75
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
70c6hwhX_



not modelled 9.7 11
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
71c2kncA_



not modelled 8.7 7
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
72d1kpla_



not modelled 6.3 19
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel
73c2bbjB_



not modelled 6.1 22
PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
74c4px7A_



not modelled 5.9 7
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylglycerophosphatase;
PDBTitle: crystal structure of lipid phosphatase e. coli pgpb

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below