Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0628c_(-)_718764_719915
DateFri Jul 26 01:50:19 BST 2019
Unique Job ID34c496d88c402ed7
SequenceVRIGVGVSTA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.446 Y:44.657 Z:58.420
Model (left) based on template c1zfjA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
Confidence and coverage
Confidence: 79.2% Coverage: 43%
164 residues ( 43% of your sequence) have been modelled with 79.2% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1zfjA_



79.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
2d1rq2a2



62.7 16
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
3d2vapa2



58.9 21
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
4d1w5fa2



55.4 17
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
5c2zauB_



54.8 18
PDB header:transferase
Chain: B: PDB Molecule:selenide, water dikinase;
PDBTitle: crystal structure of an n-terminally truncated2 selenophosphate synthetase from aquifex aeolicus
6d1dbfa_



51.0 13
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
7d1vk3a2



41.6 13
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
8d1ufya_



38.3 13
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
9d1ofua2



38.2 16
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
10c4z87B_



36.7 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: structure of the imp dehydrogenase from ashbya gossypii bound to gdp
11c1xhoB_



34.7 8
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:chorismate mutase;
PDBTitle: chorismate mutase from clostridium thermocellum cth-682
12d1xhoa_



34.7 8
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
13c4r3uD_



34.1 2
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
14c4ldaF_



33.9 6
PDB header:transcription
Chain: F: PDB Molecule:tadz;
PDBTitle: crystal structure of a chey-like protein (tadz) from pseudomonas2 aeruginosa pao1 at 2.70 a resolution
15c2xdqA_



32.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-chlb)2 complex
16c2ayxA_



31.4 14
PDB header:transferase
Chain: A: PDB Molecule:sensor kinase protein rcsc;
PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
17c1vliA_



27.3 20
PDB header:biosynthetic protein
Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse;
PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
18d2zaua1



26.7 18
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
19c5uicA_



26.1 15
PDB header:transcription
Chain: A: PDB Molecule:two-component response regulator;
PDBTitle: structure of the francisella response regulator receiver domain, qseb
20d1qh8a_



25.0 16
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
21c1ny5A_



not modelled 24.9 12
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
22c3rqiA_



not modelled 24.0 10
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein;
PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate
23d1b74a1



not modelled 23.6 8
Fold:ATC-like
Superfamily:Aspartate/glutamate racemase
Family:Aspartate/glutamate racemase
24d1m1na_



not modelled 23.1 11
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
25d1qe5a_



not modelled 22.0 29
Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
26c4k40B_



not modelled 22.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:gdsl-like lipase/acylhydrolase family protein;
PDBTitle: peptidoglycan o-acetylesterase in action, 0 min
27d1g2oa_



not modelled 22.0 33
Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
28c2yxbA_



not modelled 21.9 6
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
29c6ekhY_



not modelled 21.3 22
PDB header:metal binding protein
Chain: Y: PDB Molecule:chemotaxis protein chey;
PDBTitle: crystal structure of activated chey from methanoccocus maripaludis
30c5wlpA_



not modelled 21.0 13
PDB header:protein transport
Chain: A: PDB Molecule:autophagy-related protein 32;
PDBTitle: solution structure of the pseudo-receiver domain of atg32
31d1ys7a2



not modelled 20.8 18
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
32d3c9ua1



not modelled 20.4 14
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
33c3bolB_



not modelled 19.2 10
PDB header:transferase
Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine
PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
34c5ep0A_



not modelled 18.8 16
PDB header:transcription
Chain: A: PDB Molecule:putative repressor protein luxo;
PDBTitle: quorum-sensing signal integrator luxo - receiver+catalytic domains
35c5n6yD_



not modelled 18.5 16
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitrogenase vanadium-iron protein alpha chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
36c3stgA_



not modelled 18.0 16
PDB header:transferase
Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase;
PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis
37c5lwkB_



not modelled 17.9 20
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulatory protein;
PDBTitle: maer response regulator bound to beryllium trifluoride
38c4qpjC_



not modelled 17.9 8
PDB header:signaling protein/dna binding protein
Chain: C: PDB Molecule:cell cycle response regulator ctra;
PDBTitle: 2.7 angstrom structure of a phosphotransferase in complex with a2 receiver domain
39c4rndB_



not modelled 17.9 13
PDB header:hydrolase
Chain: B: PDB Molecule:v-type proton atpase subunit f;
PDBTitle: crystal structure of the subunit df-assembly of the eukaryotic v-2 atpase.
40c3dzdA_



not modelled 17.4 14
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
41c6ifhA_



not modelled 17.3 18
PDB header:transferase
Chain: A: PDB Molecule:sporulation initiation phosphotransferase f;
PDBTitle: unphosphorylated spo0f from paenisporosarcina sp. tg-14
42c3hv2B_



not modelled 17.2 20
PDB header:signaling protein
Chain: B: PDB Molecule:response regulator/hd domain protein;
PDBTitle: crystal structure of signal receiver domain of hd domain-containing2 protein from pseudomonas fluorescens pf-5
43d1qh8b_



not modelled 17.1 11
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
44c3g8rA_



not modelled 16.8 9
PDB header:biosynthetic protein
Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e;
PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
45c3cu5B_



not modelled 16.2 10
PDB header:transcription regulator
Chain: B: PDB Molecule:two component transcriptional regulator, arac family;
PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg
46c1y80A_



not modelled 15.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
47c4q7eA_



not modelled 15.8 16
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator of a two component regulatory system;
PDBTitle: non-phosphorylated hemr receiver domain from leptospira biflexa
48c1w59B_



not modelled 15.8 21
PDB header:cell division
Chain: B: PDB Molecule:cell division protein ftsz homolog 1;
PDBTitle: ftsz dimer, empty (m. jannaschii)
49d1vlia2



not modelled 15.5 22
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
50c5i4cA_



not modelled 15.4 8
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulatory protein rcsb;
PDBTitle: crystal structure of non-phosphorylated receiver domain of the stress2 response regulator rcsb from escherichia coli
51c2rjnA_



not modelled 15.3 16
PDB header:hydrolase
Chain: A: PDB Molecule:response regulator receiver:metal-dependent
PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
52c2ynmC_



not modelled 15.2 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
53d1mvoa_



not modelled 14.9 18
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
54c3outC_



not modelled 14.5 14
PDB header:isomerase
Chain: C: PDB Molecule:glutamate racemase;
PDBTitle: crystal structure of glutamate racemase from francisella tularensis2 subsp. tularensis schu s4 in complex with d-glutamate.
55d1ny5a1



not modelled 14.2 12
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
56c3sz8D_



not modelled 14.2 15
PDB header:transferase
Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2;
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
57d1m1nb_



not modelled 14.0 4
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
58d1krwa_



not modelled 14.0 16
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
59c4e7pA_



not modelled 14.0 10
PDB header:transcription regulator
Chain: A: PDB Molecule:response regulator;
PDBTitle: crystal structure of receiver domain of putative narl family response2 regulator spr1814 from streptococcus pneumoniae in the presence of3 the phosphoryl analog beryllofluoride
60d1peya_



not modelled 14.0 20
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
61c3pdiB_



not modelled 13.8 18
PDB header:protein binding
Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn;
PDBTitle: precursor bound nifen
62d1kgsa2



not modelled 13.8 8
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
63c2vxyA_



not modelled 13.5 16
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: the structure of ftsz from bacillus subtilis at 1.7a2 resolution
64d1jbea_



not modelled 13.4 14
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
65c3b2nA_



not modelled 13.3 14
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein q99uf4;
PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus
66c1xuzA_



not modelled 12.7 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac;
PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
67c5m7nA_



not modelled 12.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
68c3u0oA_



not modelled 12.5 20
PDB header:transferase
Chain: A: PDB Molecule:selenide, water dikinase;
PDBTitle: the crystal structure of selenophosphate synthetase from e. coli
69c3crnA_



not modelled 12.2 12
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like;
PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
70d1clia1



not modelled 12.1 12
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
71c4s05B_



not modelled 12.0 20
PDB header:transcription/dna
Chain: B: PDB Molecule:dna-binding transcriptional regulator basr;
PDBTitle: crystal structure of klebsiella pneumoniae pmra in complex with pmra2 box dna
72d2zoda1



not modelled 11.9 19
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
73d2g50a3



not modelled 11.8 19
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
74d1dbwa_



not modelled 11.7 14
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
75c3x43F_



not modelled 11.6 10
PDB header:transferase
Chain: F: PDB Molecule:o-ureido-l-serine synthase;
PDBTitle: crystal structure of o-ureido-l-serine synthase
76d2zdra2



not modelled 11.5 19
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
77c3w9sB_



not modelled 11.5 18
PDB header:signaling protein/antimicrobial protein
Chain: B: PDB Molecule:ompr family response regulator in two-component regulatory
PDBTitle: crystal structure analysis of the n-terminal receiver domain of2 response regulator pmra
78c1b74A_



not modelled 11.4 8
PDB header:isomerase
Chain: A: PDB Molecule:glutamate racemase;
PDBTitle: glutamate racemase from aquifex pyrophilus
79c3cz5B_



not modelled 11.4 18
PDB header:transcription regulator
Chain: B: PDB Molecule:two-component response regulator, luxr family;
PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
80c4e6fB_



not modelled 11.4 19
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4468 family protein (bacova_04320) from2 bacteroides ovatus atcc 8483 at 1.49 a resolution
81c5mg5P_



not modelled 11.1 15
PDB header:transferase
Chain: P: PDB Molecule:hydroxymethylglutaryl-coa synthase;
PDBTitle: a multi-component acyltransferase phlabc from pseudomonas protegens2 soaked with the monoacetylphloroglucinol (mapg)
82d2e7ya1



not modelled 11.1 4
Fold:Metallo-hydrolase/oxidoreductase
Superfamily:Metallo-hydrolase/oxidoreductase
Family:RNase Z-like
83c5ijwA_



not modelled 11.1 11
PDB header:isomerase
Chain: A: PDB Molecule:glutamate racemase;
PDBTitle: glutamate racemase (muri) from mycobacterium smegmatis with bound d-2 glutamate, 1.8 angstrom resolution, x-ray diffraction
84c3jteA_



not modelled 10.8 13
PDB header:protein binding
Chain: A: PDB Molecule:response regulator receiver protein;
PDBTitle: crystal structure of response regulator receiver domain protein from2 clostridium thermocellum
85d1pkla3



not modelled 10.6 12
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
86d1xpma1



not modelled 10.6 13
Fold:Thiolase-like
Superfamily:Thiolase-like
Family:Chalcone synthase-like
87c1w5fA_



not modelled 10.5 17
PDB header:cell division
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: ftsz, t7 mutated, domain swapped (t. maritima)
88c2xdqB_



not modelled 10.4 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b;
PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-chlb)2 complex
89c3aerC_



not modelled 10.3 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark
90c2yihA_



not modelled 10.3 33
PDB header:hydrolase
Chain: A: PDB Molecule:cel44c;
PDBTitle: structure of a paenibacillus polymyxa xyloglucanase from gh2 family 44 with xyloglucan
91d1liua3



not modelled 10.2 17
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
92c6dzkY_



not modelled 10.2 21
PDB header:ribosome
Chain: Y: PDB Molecule:ribosome hibernation promoting factor;
PDBTitle: cryo-em structure of mycobacterium smegmatis c(minus) 30s ribosomal2 subunit with mpy
93c6grgD_



not modelled 9.8 15
PDB header:biosynthetic protein
Chain: D: PDB Molecule:microcin b17-processing protein mcbd;
PDBTitle: e. coli microcin synthetase mcbbcd complex with pro-mccb17, adp and2 phosphate bound
94c1ys7B_



not modelled 9.5 20
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulatory protein prra;
PDBTitle: crystal structure of the response regulator protein prra complexed2 with mg2+
95d2uube2



not modelled 9.4 37
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Ribosomal S5 protein, N-terminal domain
96c4fylB_



not modelled 9.4 8
PDB header:translation
Chain: B: PDB Molecule:ribosome hibernation protein yhbh;
PDBTitle: high-resolution x-ray structure of hpf from vibrio cholerae
97d1yb2a1



not modelled 9.1 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:tRNA(1-methyladenosine) methyltransferase-like
98c1yb2A_



not modelled 9.1 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ta0852;
PDBTitle: structure of a putative methyltransferase from thermoplasma2 acidophilum.
99c5ohxB_



not modelled 9.0 11
PDB header:lyase
Chain: B: PDB Molecule:cystathionine beta-synthase;
PDBTitle: structure of active cystathionine b-synthase from apis mellifera

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