Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0658c_(-)_753696_754412
DateFri Jul 26 01:50:22 BST 2019
Unique Job ID185e46584795b62f
SequenceVEAGRADTVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.503 Y:47.489 Z:60.080
Model (left) based on template c4cadC_
Top template information
PDB header:protein binding
Chain: C: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
Confidence and coverage
Confidence:100.0% Coverage: 82%
194 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4cadC_



100.0 15
PDB header:protein binding
Chain: C: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
2c4cadF_



100.0 16
PDB header:protein binding
Chain: F: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
3c3rlbB_



10.7 23
PDB header:thiamine-binding protein
Chain: B: PDB Molecule:thit;
PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter
4c4hzuS_



9.0 5
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:predicted membrane protein;
PDBTitle: structure of a bacterial energy-coupling factor transporter
5c3rlbA_



8.7 23
PDB header:thiamine-binding protein
Chain: A: PDB Molecule:thit;
PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter
6c5wwoB_



8.0 17
PDB header:rna binding protein
Chain: B: PDB Molecule:essential nuclear protein 1;
PDBTitle: crystal structure of enp1
7c2w8aC_



7.0 14
PDB header:membrane protein
Chain: C: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below