Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0668_(rpoC)_763373_767323
DateFri Jul 26 01:50:23 BST 2019
Unique Job ID840596a51927503e
SequenceVLDVNFFDEL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:100.613 Y:107.755 Z:154.199
Model (left) based on template c4g7oN_
Top template information
PDB header:transcription, transferase/dna
Chain: N: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of thermus thermophilus transcription initiation2 complex containing 2 nt of rna
Confidence and coverage
Confidence:100.0% Coverage: 95%
1246 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
1312 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4g7oN_
100.0 49
PDB header:transcription, transferase/dna
Chain: N: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of thermus thermophilus transcription initiation2 complex containing 2 nt of rna
2d1smyd_
100.0 48
Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase
Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase
Family:RNA-polymerase beta-prime
3c5tw1D_
100.0 87
PDB header:transcription activator/transferase/dna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of a mycobacterium smegmatis transcription2 initiation complex with rbpa
4c2o5jN_
100.0 49
PDB header:transferase/dna-rna hybrid
Chain: N: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: crystal structure of the t. thermophilus rnap polymerase elongation2 complex with the ntp substrate analog
5c5x22D_
100.0 52
PDB header:transferase/dna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of thermus thermophilus transcription initiation2 complex with gpa and cmpcpp
6c4wqsD_
100.0 53
PDB header:transferase/dna/rna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: thermus thermophilus rna polymerase backtracked complex
7c2o5iD_
100.0 48
PDB header:transferase/dna-rna hybrid
Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: crystal structure of the t. thermophilus rna polymerase elongation2 complex
8c5xj0D_
100.0 49
PDB header:transferase/transcription
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: t. thermophilus rna polymerase holoenzyme bound with gp39 and gp76
9c6cceD_
100.0 85
PDB header:transcription/dna/antibiotic
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of a mycobacterium smegmatis rna polymerase2 transcription initiation complex with inhibitor kanglemycin a
10c3aoiN_
100.0 47
PDB header:transcription, transferase/dna/rna
Chain: N: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: rna polymerase-gfh1 complex (crystal type 2)
11c4xsxJ_
100.0 49
PDB header:transcription/antibiotic
Chain: J: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of cbr 703 bound to escherichia coli rna polymerase2 holoenzyme
12c3aoiI_
100.0 47
PDB header:transcription, transferase/dna/rna
Chain: I: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: rna polymerase-gfh1 complex (crystal type 2)
13c1l9uD_
100.0 49
PDB header:transcription
Chain: D: PDB Molecule:rna polymerase, beta-prime subunit;
PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
14c3h0gA_
100.0 23
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase ii subunit rpb1;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
15c6j9eD_
100.0 52
PDB header:transcription
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: cryo-em structure of xanthomonos oryzae transcription elongation2 complex with nusa and the bacteriophage protein p7
16c4igcD_
100.0 51
PDB header:transcription, transferase
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: x-ray crystal structure of escherichia coli sigma70 holoenzyme
17c3iydD_
100.0 48
PDB header:transcription/dna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
18c1i6vD_
100.0 49
PDB header:transcription
Chain: D: PDB Molecule:dna-directed rna polymerase;
PDBTitle: thermus aquaticus core rna polymerase-rifampicin complex
19d1i6vd_
100.0 49
Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase
Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase
Family:RNA-polymerase beta-prime
20c6gmlA_
100.0 25
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase subunit;
PDBTitle: structure of paused transcription complex pol ii-dsif-nelf
21c6dcfD_
not modelled 100.0 86
PDB header:transcription/dna/antibiotic
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure of a mycobacterium smegmatis transcription2 initiation complex with rifampicin-resistant rna polymerase and bound3 to kanglemycin a
22d1twfa_
not modelled 100.0 25
Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase
Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase
Family:RNA-polymerase beta-prime
23c4llgJ_
not modelled 100.0 52
PDB header:transferase
Chain: J: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: crystal structure analysis of the e.coli holoenzyme/gp2 complex
24c5flmA_
not modelled 100.0 26
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase;
PDBTitle: structure of transcribing mammalian rna polymerase ii
25c5tbzD_
not modelled 100.0 52
PDB header:transcription/rna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: e. coli rna polymerase complexed with nusg
26c4c3iA_
not modelled 100.0 20
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa190;
PDBTitle: structure of 14-subunit rna polymerase i at 3.0 a resolution, crystal2 form c2-100
27c5m3fA_
not modelled 100.0 21
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa190;
PDBTitle: yeast rna polymerase i elongation complex at 3.8a
28c1i6hA_
not modelled 100.0 25
PDB header:transcription/dna-rna hybrid
Chain: A: PDB Molecule:dna-directed rna polymerase ii largest subunit;
PDBTitle: rna polymerase ii elongation complex
29c5fjaA_
not modelled 100.0 22
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase iii subunit rpc1;
PDBTitle: cryo-em structure of yeast rna polymerase iii at 4.7 a
30d1ynjd1
not modelled 100.0 48
Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase
Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase
Family:RNA-polymerase beta-prime
31c1twaA_
not modelled 100.0 24
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase ii largest subunit;
PDBTitle: rna polymerase ii complexed with atp
32c5lmxA_
not modelled 100.0 20
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa190;
PDBTitle: monomeric rna polymerase i at 4.9 a resolution
33c4b1pW_
not modelled 100.0 27
PDB header:transferase/dna
Chain: W: PDB Molecule:dna-directed rna polymerase;
PDBTitle: archaeal rnap-dna binary complex at 4.32ang
34c4qiwA_
not modelled 100.0 26
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
35c2pmzQ_
not modelled 100.0 31
PDB header:translation, transferase
Chain: Q: PDB Molecule:dna-directed rna polymerase subunit a;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
36c6drdA_
not modelled 100.0 23
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase ii subunit rpb1;
PDBTitle: rna pol ii(g)
37c3qqcA_
not modelled 100.0 28
PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase subunit b, dna-directed rna
PDBTitle: crystal structure of archaeal spt4/5 bound to the rnap clamp domain
38c4qiwC_
not modelled 100.0 24
PDB header:transcription
Chain: C: PDB Molecule:dna-directed rna polymerase subunit a'';
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
39c2wb1Y_
not modelled 100.0 19
PDB header:transcription
Chain: Y: PDB Molecule:dna-directed rna polymerase rpo1c subunit;
PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase
40c2pmzG_
not modelled 100.0 24
PDB header:translation, transferase
Chain: G: PDB Molecule:dna-directed rna polymerase subunit a";
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
41c2aujD_
not modelled 96.6 14
PDB header:transferase
Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert
42c3e7hA_
not modelled 96.4 21
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: the crystal structure of the beta subunit of the dna-directed rna2 polymerase from vibrio cholerae o1 biovar eltor
43c2lmcB_
not modelled 95.8 16
PDB header:transcription
Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: structure of t7 transcription factor gp2-e. coli rnap jaw domain2 complex
44c2aukA_
not modelled 93.9 13
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: structure of e. coli rna polymerase beta' g/g' insert
45c5fswC_
not modelled 89.0 29
PDB header:transferase
Chain: C: PDB Molecule:rna dependent rna polymerase qde-1;
PDBTitle: rna dependent rna polymerase qde-1 from thielavia terrestris
46c2j7nA_
not modelled 88.7 25
PDB header:hydrolase
Chain: A: PDB Molecule:rna-dependent rna polymerase;
PDBTitle: structure of the rnai polymerase from neurospora crassa
47c3mkrB_
not modelled 80.1 29
PDB header:transport protein
Chain: B: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat
48c3mv2A_
not modelled 74.3 15
PDB header:protein transport
Chain: A: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of a-cop in complex with e-cop
49d1odha_
not modelled 68.4 29
Fold:GCM domain
Superfamily:GCM domain
Family:GCM domain
50c4iqzD_
not modelled 63.1 21
PDB header:unknown function
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: the crystal structure of a large insert in rna polymerase (rpoc)2 subunit from e. coli
51c4zlhB_
not modelled 54.9 16
PDB header:metal binding protein
Chain: B: PDB Molecule:lipopolysaccharide assembly protein b;
PDBTitle: structure of the lapb cytoplasmic domain at 2 angstroms
52c2lcqA_
not modelled 50.6 30
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
53c3hcjB_
not modelled 48.4 42
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: structure of msrb from xanthomonas campestris (oxidized2 form)
54d1xm0a1
not modelled 47.7 17
Fold:Mss4-like
Superfamily:Mss4-like
Family:SelR domain
55c3ky9B_
not modelled 45.6 25
PDB header:apoptosis
Chain: B: PDB Molecule:proto-oncogene vav;
PDBTitle: autoinhibited vav1
56c2l1uA_
not modelled 44.7 42
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b2, mitochondrial;
PDBTitle: structure-functional analysis of mammalian msrb2 protein
57c3cezA_
not modelled 44.4 42
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase;
PDBTitle: crystal structure of methionine-r-sulfoxide reductase from2 burkholderia pseudomallei
58c2k8dA_
not modelled 43.8 42
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msrb;
PDBTitle: solution structure of a zinc-binding methionine sulfoxide reductase
59c6g5iy_
not modelled 43.1 29
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
60c2hr5B_
not modelled 42.4 27
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
61c3e0mB_
not modelled 42.1 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb
PDBTitle: crystal structure of fusion protein of msra and msrb
62d1l1da_
not modelled 41.9 17
Fold:Mss4-like
Superfamily:Mss4-like
Family:SelR domain
63c5a1vK_
not modelled 41.6 26
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
64c2gj2A_
not modelled 39.3 29
PDB header:metal binding protein
Chain: A: PDB Molecule:wsv230;
PDBTitle: crystal structure of vp9 from white spot syndrome virus
65c5fa9B_
not modelled 39.2 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: bifunctional methionine sulfoxide reductase ab (msrab) from treponema2 denticola
66c1yuzB_
not modelled 38.2 30
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
67c3t6pA_
not modelled 36.9 25
PDB header:apoptosis
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 2;
PDBTitle: iap antagonist-induced conformational change in ciap1 promotes e32 ligase activation via dimerization
68c3uc9A_
not modelled 35.3 38
PDB header:recombination
Chain: A: PDB Molecule:increased recombination centers protein 6;
PDBTitle: crystal structure of yeast irc6p - a novel type of conserved clathrin2 accessory protein
69c2vrwB_
not modelled 34.8 24
PDB header:signaling protein
Chain: B: PDB Molecule:proto-oncogene vav;
PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor
70c2bx9J_
not modelled 34.6 46
PDB header:transcription regulation
Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory
PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
71c5zb8B_
not modelled 34.5 25
PDB header:dna binding protein
Chain: B: PDB Molecule:pfuendoq;
PDBTitle: crystal structure of the novel lesion-specific endonuclease pfuendoq2 from pyrococcus furiosus
72d2gmga1
not modelled 33.4 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF0610-like
73c2kaoA_
not modelled 33.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b1;
PDBTitle: structure of reduced mouse methionine sulfoxide reductase b12 (sec95cys mutant)
74d1x64a2
not modelled 32.7 20
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
75d2eppa1
not modelled 31.0 36
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
76d2g9ha2
not modelled 30.2 71
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
77c4u3eA_
not modelled 30.1 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside triphosphate reductase;
PDBTitle: anaerobic ribonucleotide reductase
78c4rasC_
not modelled 29.9 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, nad-binding/iron-sulfur cluster-binding
PDBTitle: reductive dehalogenase structure suggests a mechanism for b12-2 dependent dehalogenation
79c5ey2A_
not modelled 29.5 21
PDB header:transcription
Chain: A: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody;
PDBTitle: crystal structure of cody from bacillus cereus
80c2eppA_
not modelled 29.3 36
PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the first c2h2 type zinc finger2 domain of zinc finger protein 278
81d1s9va2
not modelled 29.1 57
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
82c1q68B_
not modelled 28.8 30
PDB header:membrane protein/transferase
Chain: B: PDB Molecule:proto-oncogene tyrosine-protein kinase lck;
PDBTitle: solution structure of t-cell surface glycoprotein cd4 and2 proto-oncogene tyrosine-protein kinase lck fragments
83c1v9pB_
not modelled 28.1 16
PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase
84c1q69B_
not modelled 27.6 30
PDB header:membrane protein/transferase
Chain: B: PDB Molecule:proto-oncogene tyrosine-protein kinase lck;
PDBTitle: solution structure of t-cell surface glycoprotein cd8 alpha2 chain and proto-oncogene tyrosine-protein kinase lck3 fragments
85c1bi6H_
not modelled 27.6 26
PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr structure of bromelain inhibitor vi from pineapple stem
86c2bi6H_
not modelled 27.6 26
PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr study of bromelain inhibitor vi from pineapple stem
87c5y06A_
not modelled 27.5 27
PDB header:unknown function
Chain: A: PDB Molecule:msmeg_4306;
PDBTitle: structural characterization of msmeg_4306 from mycobacterium smegmatis
88c3imkA_
not modelled 26.9 19
PDB header:metal binding protein
Chain: A: PDB Molecule:putative molybdenum carrier protein;
PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution
89d1x62a1
not modelled 26.8 27
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
90d1hk8a_
not modelled 26.8 22
Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:Class III anaerobic ribonucleotide reductase NRDD subunit
91c1hk8A_
not modelled 26.8 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase;
PDBTitle: structural basis for allosteric substrate specificity regulation in2 class iii ribonucleotide reductases: nrdd in complex with dgtp
92c5kl1B_
not modelled 26.7 21
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:protein nanos;
PDBTitle: crystal structure of the pumilio-nos-hunchback rna complex
93c3bjiA_
not modelled 26.3 26
PDB header:signaling protein
Chain: A: PDB Molecule:proto-oncogene vav;
PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1
94c5ijlA_
not modelled 26.2 22
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
95c2f9iD_
not modelled 25.5 11
PDB header:transferase
Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit
PDBTitle: crystal structure of the carboxyltransferase subunit of acc from2 staphylococcus aureus
96d2vnud2
not modelled 25.0 21
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
97c1dvbA_
not modelled 24.8 27
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
98c5xodB_
not modelled 24.6 35
PDB header:transcription
Chain: B: PDB Molecule:ski oncogene;
PDBTitle: crystal structure of human smad2-ski complex
99d1eb7a1
not modelled 24.4 17
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Di-heme cytochrome c peroxidase
100c2kc1A_
not modelled 24.2 22
PDB header:structural protein
Chain: A: PDB Molecule:mkiaa1027 protein;
PDBTitle: nmr structure of the f0 domain (residues 0-85) of the talin2 ferm domain
101c2lvuA_
not modelled 24.1 40
PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 10
102d1nvmb2
not modelled 23.8 28
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
103c4glxA_
not modelled 23.3 16
PDB header:ligase/ligase inhibitor/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: dna ligase a in complex with inhibitor
104d1nmla1
not modelled 23.3 17
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Di-heme cytochrome c peroxidase
105d6rxna_
not modelled 23.1 30
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
106d1iqca1
not modelled 22.8 17
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Di-heme cytochrome c peroxidase
107d2coba1
not modelled 22.7 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Psq domain
108d1jk8a2
not modelled 22.4 40
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
109c4jn6B_
not modelled 22.2 34
PDB header:lyase/oxidoreductase
Chain: B: PDB Molecule:acetaldehyde dehydrogenase;
PDBTitle: crystal structure of the aldolase-dehydrogenase complex from2 mycobacterium tuberculosis hrv37
110c3uk2B_
not modelled 21.9 24
PDB header:ligase
Chain: B: PDB Molecule:pantothenate synthetase;
PDBTitle: the structure of pantothenate synthetase from burkholderia2 thailandensis
111c3j3v0_
not modelled 21.9 44
PDB header:ribosome
Chain: 0: PDB Molecule:50s ribosomal protein l32;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
112c2j04C_
not modelled 21.7 25
PDB header:transcription
Chain: C: PDB Molecule:hypothetical protein ypl007c;
PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor iiic
113c2f9yB_
not modelled 21.7 28
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit
PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli
114d2f9yb1
not modelled 21.7 28
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
115c1pqrA_
not modelled 21.7 43
PDB header:toxin
Chain: A: PDB Molecule:alpha-a-conotoxin eiva;
PDBTitle: solution conformation of alphaa-conotoxin eiva
116c5fmfR_
not modelled 21.6 27
PDB header:transcription
Chain: R: PDB Molecule:transcription initiation factor iie subunit alpha, tfa1;
PDBTitle: the p-lobe of rna polymerase ii pre-initiation complex
117c5f4hF_
not modelled 21.2 15
PDB header:hydrolase
Chain: F: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
118d1es0a2
not modelled 21.2 40
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
119d1muja2
not modelled 21.1 40
Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
120c2fugC_
not modelled 21.1 9
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3;
PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite