Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0680c_(-)_780045_780419
DateFri Jul 26 01:50:25 BST 2019
Unique Job ID5d83c36a5589565d
SequenceVKWNTVAASL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.932 Y:31.548 Z:35.265
Model (left) based on template c3ljyA_
Top template information
PDB header:cell adhesion
Chain: A: PDB Molecule:putative adhesin;
PDBTitle: crystal structure of putative adhesin (yp_001304413.1) from2 parabacteroides distasonis atcc 8503 at 2.41 a resolution
Confidence and coverage
Confidence: 40.1% Coverage: 66%
82 residues ( 66% of your sequence) have been modelled with 40.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ljyA_



40.1 18
PDB header:cell adhesion
Chain: A: PDB Molecule:putative adhesin;
PDBTitle: crystal structure of putative adhesin (yp_001304413.1) from2 parabacteroides distasonis atcc 8503 at 2.41 a resolution
2c3sulA_



29.5 29
PDB header:unknown function
Chain: A: PDB Molecule:cerato-platanin-like protein;
PDBTitle: crystal structure of cerato-platanin 3 from m. perniciosa (mpcp3)
3d1ckqa_



26.1 30
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease EcoRI
4c4tmdA_



24.4 25
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: x-ray structure of putative uncharacterized protein (rv0999 ortholog)2 from mycobacterium smegmatis
5d1k4za_



16.4 16
Fold:Single-stranded right-handed beta-helix
Superfamily:C-terminal domain of adenylylcyclase associated protein
Family:C-terminal domain of adenylylcyclase associated protein
6d1q7ha2



16.1 9
Fold:Cystatin-like
Superfamily:Pre-PUA domain
Family:Hypothetical protein Ta1423, N-terminal domain
7d1f00i2



13.5 25
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Invasin/intimin cell-adhesion fragments
Family:Invasin/intimin cell-adhesion fragments
8d1vqoe1



13.0 9
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
9c3sukB_



11.6 30
PDB header:unknown function
Chain: B: PDB Molecule:cerato-platanin-like protein;
PDBTitle: crystal structure of cerato-platanin 2 from m. perniciosa (mpcp2)
10c1yn3A_



11.5 43
PDB header:toxin, protein binding
Chain: A: PDB Molecule:truncated cell surface protein map-w;
PDBTitle: crystal structures of eap domains from staphylococcus2 aureus reveal an unexpected homology to bacterial3 superantigens
11d1rl6a1



11.4 23
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
12c1yn4A_



11.4 14
PDB header:unknown function
Chain: A: PDB Molecule:eaph1;
PDBTitle: crystal structures of eap domains from staphylococcus2 aureus reveal an unexpected homology to bacterial3 superantigens
13c3sujA_



11.3 26
PDB header:unknown function
Chain: A: PDB Molecule:cerato-platanin 1;
PDBTitle: crystal structure of cerato-platanin 1 from m. perniciosa (mpcp1)
14c3hh1D_



11.1 30
PDB header:transferase
Chain: D: PDB Molecule:tetrapyrrole methylase family protein;
PDBTitle: the structure of a tetrapyrrole methylase family protein domain from2 chlorobium tepidum tls
15c1yn5B_



11.1 21
PDB header:unknown function
Chain: B: PDB Molecule:eaph2;
PDBTitle: crystal structures of eap domains from staphylococcus2 aureus reveal an unexpected homology to bacterial3 superantigens
16c1e5uI_



8.1 21
PDB header:intimin
Chain: I: PDB Molecule:intimin;
PDBTitle: nmr representative structure of intimin-190 (int190) from2 enteropathogenic e. coli
17d2z3qb1



7.6 19
Fold:Complement control module/SCR domain
Superfamily:Complement control module/SCR domain
Family:Complement control module/SCR domain
18c3j21F_



7.4 11
PDB header:ribosome
Chain: F: PDB Molecule:50s ribosomal protein l6p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
19c5g5oC_



7.3 15
PDB header:viral protein
Chain: C: PDB Molecule:lh3 hexon-interlacing capsid protein;
PDBTitle: structure of the snake adenovirus 1 hexon-interlacing lh3 protein,2 native
20c2vbeA_



7.0 29
PDB header:viral protein
Chain: A: PDB Molecule:tailspike-protein;
PDBTitle: tailspike protein of bacteriophage sf6
21c5hceD_



not modelled 6.9 39
PDB header:immune system
Chain: D: PDB Molecule:rhipicephalus appendiculatus raci1;
PDBTitle: ternary complex of human complement c5 with ornithodoros moubata omci2 and rhipicephalus appendiculatus raci1
22c2n21A_



not modelled 6.8 83
PDB header:hydrolase/dna
Chain: A: PDB Molecule:atp-dependent rna helicase dhx36;
PDBTitle: solution structure of complex between dna g-quadruplex and g-2 quadruplex recognition domain of rhau
23c2n16A_



not modelled 6.8 83
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dhx36;
PDBTitle: solution structure of g-quadruplex recognition domain of rhau
24c2zwkA_



not modelled 6.6 19
PDB header:cell adhesion
Chain: A: PDB Molecule:intimin;
PDBTitle: crystal structure of intimin-tir90 complex
25d2e1ba1



not modelled 6.6 37
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:AlaX-M N-terminal domain-like
26c2xvsA_



not modelled 6.5 24
PDB header:antitumor protein
Chain: A: PDB Molecule:tetratricopeptide repeat protein 5;
PDBTitle: crystal structure of human ttc5 (strap) c-terminal ob2 domain
27c2b0rB_



not modelled 6.4 14
PDB header:unknown function
Chain: B: PDB Molecule:possible adenyl cyclase-associated protein;
PDBTitle: crystal structure of cyclase-associated protein from cryptosporidium2 parvum
28c2z3rF_



not modelled 6.4 21
PDB header:cytokine/cytokine receptor
Chain: F: PDB Molecule:interleukin-15 receptor alpha chain;
PDBTitle: crystal structure of the il-15/il-15ra complex
29c4p3xA_



not modelled 6.1 32
PDB header:transferase
Chain: A: PDB Molecule:quinolinate synthase a;
PDBTitle: structure of the fe4s4 quinolinate synthase nada from thermotoga2 maritima
30c1qfnB_



not modelled 6.1 55
PDB header:electron transport/oxidoreductase
Chain: B: PDB Molecule:protein (ribonucleoside-diphosphate reductase 1);
PDBTitle: glutaredoxin-1-ribonucleotide reductase b1 mixed disulfide2 bond
31d1wzua1



not modelled 5.6 38
Fold:NadA-like
Superfamily:NadA-like
Family:NadA-like
32c3j3wJ_



not modelled 5.5 14
PDB header:ribosome
Chain: J: PDB Molecule:50s ribosomal protein l13;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 ii-a)
33c6az5A_



not modelled 5.2 28
PDB header:sugar binding protein
Chain: A: PDB Molecule:alpha-amylase;
PDBTitle: crystal structure of cbmd (family cbm41) from eubacterium rectale2 amy13k

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