Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0691A_(RVBD0691A)_791661_791849
DateFri Jul 26 01:50:26 BST 2019
Unique Job ID9e09ef67390e99bf
SequenceVRHHIRPSIS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.330 Y:19.409 Z:11.371
Model (left) based on template c4fc8B_
Top template information
PDB header:transcription
Chain: B: PDB Molecule:transcription protein rtr1;
PDBTitle: crystal structure of transcription regulator protein rtr1 from2 kluyveromyces lactis
Confidence and coverage
Confidence: 16.6% Coverage: 23%
14 residues ( 23% of your sequence) have been modelled with 16.6% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4fc8B_



16.6 36
PDB header:transcription
Chain: B: PDB Molecule:transcription protein rtr1;
PDBTitle: crystal structure of transcription regulator protein rtr1 from2 kluyveromyces lactis
2c3fq6A_



13.6 14
PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: the crystal structure of a methyltransferase domain from bacteroides2 thetaiotaomicron vpi
3c5c2yA_



13.4 36
PDB header:hydrolase
Chain: A: PDB Molecule:rna polymerase ii subunit b1 ctd phosphatase rtr1;
PDBTitle: crystal structure of the saccharomyces cerevisiae rtr1 (regulator of2 transcription)
4d1ewsa_



13.3 63
Fold:Defensin-like
Superfamily:Defensin-like
Family:Defensin
5c1ewsA_



13.3 63
PDB header:antimicrobial protein
Chain: A: PDB Molecule:rk-1 defensin;
PDBTitle: the three-dimensional solution structure of the rabbit2 kidney defensin, rk-1
6d1x4la2



9.8 86
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
7c2jyvA_



8.9 71
PDB header:cytokine
Chain: A: PDB Molecule:granulin-2;
PDBTitle: human granulin f
8c2bcxB_



7.4 27
PDB header:calcium binding protein
Chain: B: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of calmodulin in complex with a ryanodine receptor2 peptide
9c6drfA_



6.4 43
PDB header:signaling protein
Chain: A: PDB Molecule:protein rd3;
PDBTitle: structure of human retinal degeneration 3(rd3) protein
10c1nh3A_



6.1 27
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase i;
PDBTitle: human topoisomerase i ara-c complex
11c4ehpB_



5.6 24
PDB header:cell adhesion
Chain: B: PDB Molecule:catenin alpha-1;
PDBTitle: crystal structure of human vinculin head domain (residues 1-252) in2 complex with alpha-catenin (residues 277-382)

Binding site prediction 

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