1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	T	T	A	Q	K	V	Q	P	R	L	K	E	R	Y	R	S	E	I	R	D	A	L	R	K	Q	F	G	Y	G	N	V	M	Q	I	P	T	V	T	K	V	V	V	N	M	G	V	G	E	A	A	R	D	A	K	L	I	N	G	A
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?																																								?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		V	N	D	L	A	L	I	T	G	Q	K	P	E	V	R	R	A	R	K	S	I	A	Q	F	K	L	R	E	G	M	P	V	G	V	R	V	T	L	R	G	D	R	M	W	E	F	L	D	R	L	T	S	I	A	L	P	R	I	R	D
Secondary structure
SS confidence
Disorder																				?		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		F	R	G	L	S	P	K	Q	F	D	G	V	G	N	Y	T	F	G	L	A	E	Q	A	V	F	H	E	V	D	V	D	K	I	D	R	V	R	G	M	D	I	N	V	V	T	S	A	A	T	D	D	E	G	R	A	L	L	R	A	L
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.
Sequence		G	F	P	F	K	E	N
Secondary structure
SS confidence
Disorder			?	?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 21%) Alpha helix ( 44%) Beta strand ( 19%)

Rank Aligned region

PDB 5o60 chain F Region: 6 - 187 Aligned: 182 Modelled: 182 Confidence: 100.0% Identity: 84% PDB header:ribosome Chain: F: PDB Molecule:50s ribosomal protein l5; PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis Phyre2 PDB 1iq4 chain A Region: 9 - 186 Aligned: 178 Modelled: 178 Confidence: 100.0% Identity: 57% Fold: RL5-like Superfamily: RL5-like Family: Ribosomal protein L5 Phyre2 PDB 1mji chain A Region: 10 - 186 Aligned: 177 Modelled: 177 Confidence: 100.0% Identity: 58% Fold: RL5-like Superfamily: RL5-like Family: Ribosomal protein L5 Phyre2 PDB 2zjr chain D domain 1 Region: 10 - 186 Aligned: 177 Modelled: 177 Confidence: 100.0% Identity: 54% Fold: RL5-like Superfamily: RL5-like Family: Ribosomal protein L5 Phyre2 PDB 3bbo chain H Region: 10 - 184 Aligned: 175 Modelled: 175 Confidence: 100.0% Identity: 49% PDB header:ribosome Chain: H: PDB Molecule:ribosomal protein l5; PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome Phyre2 PDB 2gyc chain D domain 1 Region: 10 - 186 Aligned: 177 Modelled: 177 Confidence: 100.0% Identity: 57% Fold: RL5-like Superfamily: RL5-like Family: Ribosomal protein L5 Phyre2 PDB 1vw4 chain E Region: 7 - 186 Aligned: 177 Modelled: 180 Confidence: 100.0% Identity: 38% PDB header:ribosome Chain: E: PDB Molecule:54s ribosomal protein l7, mitochondrial; PDBTitle: structure of the yeast mitochondrial large ribosomal subunit Phyre2 PDB 3j21 chain E Region: 17 - 186 Aligned: 161 Modelled: 170 Confidence: 100.0% Identity: 30% PDB header:ribosome Chain: E: PDB Molecule:50s ribosomal protein l5p; PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins) Phyre2 PDB 4a1c chain D Region: 28 - 174 Aligned: 137 Modelled: 147 Confidence: 100.0% Identity: 31% PDB header:ribosome Chain: D: PDB Molecule:60s ribosomal protein l11; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. Phyre2 PDB 3zf7 chain L Region: 30 - 174 Aligned: 135 Modelled: 145 Confidence: 100.0% Identity: 27% PDB header:ribosome Chain: L: PDB Molecule:60s ribosomal protein l11, putative; PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome Phyre2 PDB 1s1i chain J Region: 31 - 166 Aligned: 126 Modelled: 133 Confidence: 100.0% Identity: 31% PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h. Phyre2 PDB 1vqo chain D domain 1 Region: 31 - 145 Aligned: 99 Modelled: 107 Confidence: 100.0% Identity: 42% Fold: RL5-like Superfamily: RL5-like Family: Ribosomal protein L5 Phyre2 PDB 4xeo chain B Region: 123 - 183 Aligned: 59 Modelled: 61 Confidence: 63.8% Identity: 22% PDB header:ligase Chain: B: PDB Molecule:alanine--trna ligase, cytoplasmic; PDBTitle: crystal structure of human alars catalytic domain with r329h mutation Phyre2 PDB 5knn chain G Region: 123 - 183 Aligned: 59 Modelled: 61 Confidence: 57.0% Identity: 22% PDB header:ligase Chain: G: PDB Molecule:alanine--trna ligase, cytoplasmic; PDBTitle: evolutionary gain of alanine mischarging to non-cognate trnas with a2 g4:u69 base pair Phyre2 PDB 3hxx chain A Region: 123 - 183 Aligned: 59 Modelled: 61 Confidence: 26.6% Identity: 22% PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp Phyre2 PDB 2rf4 chain B Region: 98 - 126 Aligned: 29 Modelled: 29 Confidence: 23.2% Identity: 45% PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Phyre2 PDB 1yfs chain B Region: 123 - 183 Aligned: 59 Modelled: 61 Confidence: 21.6% Identity: 22% PDB header:ligase Chain: B: PDB Molecule:alanyl-trna synthetase; PDBTitle: the crystal structure of alanyl-trna synthetase in complex2 with l-alanine Phyre2 PDB 5o8o chain A Region: 128 - 184 Aligned: 57 Modelled: 57 Confidence: 18.2% Identity: 23% PDB header:protein transport Chain: A: PDB Molecule:mitochondrial import receptor subunit tom40; PDBTitle: n. crassa tom40 model based on cryo-em structure of the tom core2 complex at 6.8 a Phyre2 PDB 2jvf chain A Region: 160 - 180 Aligned: 21 Modelled: 21 Confidence: 13.9% Identity: 24% PDB header:de novo protein Chain: A: PDB Molecule:de novo protein m7; PDBTitle: solution structure of m7, a computationally-designed2 artificial protein Phyre2 PDB 3d37 chain A domain 1 Region: 100 - 138 Aligned: 30 Modelled: 39 Confidence: 13.9% Identity: 27% Fold: Phage tail proteins Superfamily: Phage tail proteins Family: Baseplate protein-like Phyre2 1 c5o60F_ 2 d1iq4a_ 3 d1mjia_ 4 d2zjrd1 5 c3bboH_ 6 d2gycd1 7 c1vw4E_ 8 c3j21E_ 9 c4a1cD_ 10 c3zf7L_ 11 c1s1iJ_ 12 d1vqod1 13 c4xeoB_ 14 c5knnG_ 15 c3hxxA_ 16 c2rf4B_ 17 c1yfsB_ 18 c5o8oA_ 19 c2jvfA_ 20 d3d37a1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48