Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0722_(rpmD)_814996_815193
DateFri Jul 26 01:50:29 BST 2019
Unique Job ID07248faccd081fb1
SequenceMSQLKITQVR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.858 Y:26.473 Z:34.350
Model (left) based on template d1bxya_
Top template information
Fold:Ribosomal protein L30p/L7e
Superfamily:Ribosomal protein L30p/L7e
Family:Ribosomal protein L30p/L7e
Confidence and coverage
Confidence:100.0% Coverage: 92%
60 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1bxya_



100.0 42
Fold:Ribosomal protein L30p/L7e
Superfamily:Ribosomal protein L30p/L7e
Family:Ribosomal protein L30p/L7e
2c5o60a_



99.9 79
PDB header:ribosome
Chain: A: PDB Molecule:23s rrna;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
3c4ce43_



99.9 19
PDB header:ribosome
Chain: 3: PDB Molecule:mrpl30;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
4c3j3vY_



99.9 50
PDB header:ribosome
Chain: Y: PDB Molecule:50s ribosomal protein l30;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
5d2gycx1



99.9 52
Fold:Ribosomal protein L30p/L7e
Superfamily:Ribosomal protein L30p/L7e
Family:Ribosomal protein L30p/L7e
6c1vw4U_



99.9 32
PDB header:ribosome
Chain: U: PDB Molecule:54s ribosomal protein l33, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
7d2zjrw1



99.9 42
Fold:Ribosomal protein L30p/L7e
Superfamily:Ribosomal protein L30p/L7e
Family:Ribosomal protein L30p/L7e
8c4v193_



99.9 19
PDB header:ribosome
Chain: 3: PDB Molecule:mitoribosomal protein ul30m, mrpl30;
PDB Fragment:cca-3' end; PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
9c3j21Y_



99.8 22
PDB header:ribosome
Chain: Y: PDB Molecule:50s ribosomal protein l30p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
10d1vqow1



99.1 19
Fold:Ribosomal protein L30p/L7e
Superfamily:Ribosomal protein L30p/L7e
Family:Ribosomal protein L30p/L7e
11c3j3bF_



99.1 21
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7;
PDBTitle: structure of the human 60s ribosomal proteins
12c3j39F_



99.1 19
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
13c3zf7w_



99.1 23
PDB header:ribosome
Chain: W: PDB Molecule:60s ribosomal protein l23, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
14c3izce_



99.1 19
PDB header:ribosome
Chain: E: PDB Molecule:60s ribosomal protein rpl11 (l5p);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
15c4a1cV_



99.1 15
PDB header:ribosome
Chain: V: PDB Molecule:60s ribosomal protein l7;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
16c3iz5e_



99.0 25
PDB header:ribosome
Chain: E: PDB Molecule:60s ribosomal protein l11 (l5p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
17c3jywF_



99.0 20
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
18c2zkrw_



99.0 21
PDB header:ribosomal protein/rna
Chain: W: PDB Molecule:rna expansion segment es10;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
19c1s1iF_



98.9 19
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
20c3j66s_



98.5 21
PDB header:ribosome
Chain: S: PDB Molecule:
PDBTitle: arx1 pre-60s particle. this entry contains the alternative position2 for rlp7.
21d1jhfa1



not modelled 10.5 31
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
22c3vg8F_



not modelled 9.4 33
PDB header:unknown function
Chain: F: PDB Molecule:hypothetical protein tthb210;
PDBTitle: crystal structure of hypothetical protein tthb210 from thermus2 thermophilus hb8
23c6bj5C_



not modelled 7.0 17
PDB header:immunosuppressant
Chain: C: PDB Molecule:serine proteinase inhibitor 1;
PDBTitle: structure of the clinically used myxomaviral serine protease inhibitor2 1 (serp-1)
24c3excX_



not modelled 6.9 35
PDB header:hydrolase
Chain: X: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the rna'se sso8090 from sulfolobus solfataricus
25c3ilhA_



not modelled 6.1 19
PDB header:transcription regulator
Chain: A: PDB Molecule:two component response regulator;
PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii
26d1jr2a_



not modelled 5.5 14
Fold:HemD-like
Superfamily:HemD-like
Family:HemD-like
27c1jr2A_



not modelled 5.5 14
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen-iii synthase;
PDBTitle: structure of uroporphyrinogen iii synthase

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