Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0727c_(fucA)_819846_820502
DateFri Jul 26 01:50:30 BST 2019
Unique Job ID19025d106cfd5fb1
SequenceMNFVDAPESA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.707 Y:48.716 Z:54.727
Model (left) based on template d1ojra_
Top template information
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
Confidence and coverage
Confidence:100.0% Coverage: 99%
215 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ojra_



100.0 21
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
2c4c24A_



100.0 35
PDB header:lyase
Chain: A: PDB Molecule:l-fuculose phosphate aldolase;
PDBTitle: l-fuculose 1-phosphate aldolase
3d1e4cp_



100.0 29
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
4c6btdA_



100.0 35
PDB header:lyase
Chain: A: PDB Molecule:fuculose phosphate aldolase;
PDBTitle: crystal structure of deoxyribose-phosphate aldolase from bacillus2 thuringiensis involved in dispatching the ubiquitous radical sam3 enzyme byproduct 5-deoxyribose
5c3ocrA_



100.0 17
PDB header:lyase
Chain: A: PDB Molecule:class ii aldolase/adducin domain protein;
PDBTitle: crystal structure of aldolase ii superfamily protein from pseudomonas2 syringae
6c4xxfA_



100.0 22
PDB header:lyase
Chain: A: PDB Molecule:fuculose-1-phosphate aldolase;
PDBTitle: l-fuculose 1-phosphate aldolase from glaciozyma antarctica pi12
7c2z7bA_



100.0 20
PDB header:lyase
Chain: A: PDB Molecule:mlr6791 protein;
PDBTitle: crystal structure of mesorhizobium loti 3-hydroxy-2-methylpyridine-4,2 5-dicarboxylate decarboxylase
8c2opiB_



100.0 21
PDB header:lyase
Chain: B: PDB Molecule:l-fuculose-1-phosphate aldolase;
PDBTitle: crystal structure of l-fuculose-1-phosphate aldolase from bacteroides2 thetaiotaomicron
9d1k0wa_



100.0 30
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
10c2fk5B_



100.0 27
PDB header:lyase
Chain: B: PDB Molecule:fuculose-1-phosphate aldolase;
PDBTitle: crystal structure of l-fuculose-1-phosphate aldolase from thermus2 thermophilus hb8
11d1pvta_



100.0 27
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
12c4m6rA_



100.0 20
PDB header:lyase
Chain: A: PDB Molecule:methylthioribulose-1-phosphate dehydratase;
PDBTitle: structural and biochemical basis for the inhibition of cell death by2 apip, a methionine salvage enzyme
13c2irpA_



100.0 23
PDB header:lyase
Chain: A: PDB Molecule:putative aldolase class 2 protein aq_1979;
PDBTitle: crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979)2 from aquifex aeolicus vf5
14c3m4rA_



100.0 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum
15c4xaeB_



59.2 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:feruloyl coa ortho-hydroxylase 1;
PDBTitle: structure of feruloyl-coa 6-hydroxylase (f6h) from arabidopsis2 thaliana
16d1w9ya1



27.7 14
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
17d1odma_



27.6 17
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
18c5gj9A_



26.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate oxidase 2;
PDBTitle: crystal structure of arabidopsis thaliana aco2 in complex with poa
19c6g1cV_



26.1 14
PDB header:antitoxin
Chain: V: PDB Molecule:antitoxin hicb;
PDBTitle: crystal structure of the n-terminal domain of burkholderia2 pseudomallei antitoxin hicb
20d1gp6a_



26.0 16
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
21c2kouA_



not modelled 24.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:dicer-like protein 4;
PDBTitle: dicer like protein
22c4q0mA_



not modelled 23.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:l-asparaginase;
PDBTitle: crystal structure of pyrococcus furiosus l-asparaginase
23c2yztA_



not modelled 21.5 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha1756;
PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8
24c2yz3B_



not modelled 21.2 12
PDB header:hydrolase
Chain: B: PDB Molecule:metallo-beta-lactamase;
PDBTitle: crystallographic investigation of inhibition mode of the2 vim-2 metallo-beta-lactamase from pseudomonas aeruginosa3 with mercaptocarboxylate inhibitor
25c2d6fA_



not modelled 20.9 17
PDB header:ligase/rna
Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d;
PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
26c3on7C_



not modelled 20.3 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family;
PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution
27c2k06A_



not modelled 17.8 16
PDB header:transcription
Chain: A: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: solution structure of the aminoterminal domain of e. coli nusg
28d1nz8a_



not modelled 17.6 36
Fold:Ferredoxin-like
Superfamily:N-utilization substance G protein NusG, N-terminal domain
Family:N-utilization substance G protein NusG, N-terminal domain
29c6jyvA_



not modelled 17.4 23
PDB header:metal binding protein
Chain: A: PDB Molecule:probable iron/ascorbate oxidoreductase;
PDBTitle: structure of an isopenicillin n synthase from pseudomonas aeruginosa2 pao1
30d1dcsa_



not modelled 16.3 17
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
31c5ot0A_



not modelled 15.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:l-asparaginase;
PDBTitle: the thermostable l-asparaginase from thermococcus kodakarensis
32c4ad8A_



not modelled 15.6 13
PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein recn;
PDBTitle: crystal structure of a deletion mutant of deinococcus radiodurans2 recn
33d2bfdb2



not modelled 14.1 19
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
34c3ju3A_



not modelled 13.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain;
PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum
35c1ecjB_



not modelled 13.7 15
PDB header:transferase
Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate
PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer
36c3pvjB_



not modelled 13.6 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440
37c1wnfA_



not modelled 12.5 16
PDB header:hydrolase
Chain: A: PDB Molecule:l-asparaginase;
PDBTitle: crystal structure of ph0066 from pyrococcus horikoshii
38c4awyB_



not modelled 11.3 10
PDB header:hydrolase
Chain: B: PDB Molecule:metallo-beta-lactamase aim-1;
PDBTitle: crystal structure of the mobile metallo-beta-lactamase aim-1 from2 pseudomonas aeruginosa: insights into antibiotic binding and the role3 of gln157
39c5apgA_



not modelled 11.2 20
PDB header:transferase
Chain: A: PDB Molecule:tsr3;
PDBTitle: structure of the sam-dependent rrna:acp-transferase tsr32 from vulcanisaeta distributa
40c5iqkB_



not modelled 11.0 11
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase rm3;
PDBTitle: rm3 metallo-beta-lactamase
41c2yheD_



not modelled 10.7 19
PDB header:hydrolase
Chain: D: PDB Molecule:sec-alkyl sulfatase;
PDBTitle: structure determination of the stereoselective inverting sec-2 alkylsulfatase pisa1 from pseudomonas sp.
42d1j5ua_



not modelled 10.5 11
Fold:MTH1598-like
Superfamily:MTH1598-like
Family:MTH1598-like
43d1w85b2



not modelled 10.3 16
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
44c4n2pC_



not modelled 10.1 16
PDB header:chaperone
Chain: C: PDB Molecule:protein archease;
PDBTitle: structure of archease from pyrococcus horikoshii
45c3zieC_



not modelled 10.0 20
PDB header:cell cycle
Chain: C: PDB Molecule:sepf-like protein;
PDBTitle: sepf-like protein from archaeoglobus fulgidus
46c5yzlA_



not modelled 9.9 21
PDB header:chaperone
Chain: A: PDB Molecule:protein archease;
PDBTitle: crystal structure of human archease d178a
47c5lgmA_



not modelled 9.9 38
PDB header:transcription
Chain: A: PDB Molecule:fusion protein 5.5/5.7;
PDBTitle: gp5.7 mutant l42a
48c5ld9B_



not modelled 9.8 19
PDB header:hydrolase
Chain: B: PDB Molecule:jamm1;
PDBTitle: structure of deubiquitinating enzyme homolog, pyrococcus furiosus2 jamm1.
49c2ra9A_



not modelled 9.8 25
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein duf1285;
PDBTitle: crystal structure of a duf1285 family protein (sbal_2486) from2 shewanella baltica os155 at 1.40 a resolution
50c5yrzC_



not modelled 9.8 19
PDB header:antitoxin/hydrolase
Chain: C: PDB Molecule:hicb;
PDBTitle: toxin-antitoxin complex from streptococcus pneumoniae
51c1zq1B_



not modelled 9.7 15
PDB header:lyase
Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d;
PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi
52d1jw3a_



not modelled 9.4 32
Fold:MTH1598-like
Superfamily:MTH1598-like
Family:MTH1598-like
53c6d1oD_



not modelled 9.3 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:(r)-phenoxypropionate/alpha-ketoglutarate-dioxygenase;
PDBTitle: ft_5 dioxygenase apoenzyme
54d2c9wa2



not modelled 9.1 18
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
55d1m1ha2



not modelled 9.0 30
Fold:Ferredoxin-like
Superfamily:N-utilization substance G protein NusG, N-terminal domain
Family:N-utilization substance G protein NusG, N-terminal domain
56c4ux3A_



not modelled 9.0 3
PDB header:protein binding
Chain: A: PDB Molecule:structural maintenance of chromosomes protein 3;
PDBTitle: cohesin smc3-hd:scc1-n complex from yeast
57c4p7dA_



not modelled 9.0 22
PDB header:toxin
Chain: A: PDB Molecule:antitoxin hicb3;
PDBTitle: antitoxin hicb3 crystal structure
58c5d6hB_



not modelled 8.9 42
PDB header:chaperone/protein transport
Chain: B: PDB Molecule:csua/b;
PDBTitle: crystal structure of csuc-csua/b chaperone-major subunit pre-assembly2 complex from csu biofilm-mediating pili of acinetobacter baumannii
59c2daoA_



not modelled 8.8 13
PDB header:dna binding protein
Chain: A: PDB Molecule:transcription factor etv6;
PDBTitle: solution structure of ets domain transcriptional factor2 etv6 protein
60c4n58A_



not modelled 8.6 26
PDB header:hydrolase
Chain: A: PDB Molecule:pectocin m2;
PDBTitle: crystal structure of pectocin m2 at 1.86 angstroms
61d1flia_



not modelled 8.5 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
62c2aexA_



not modelled 8.4 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:coproporphyrinogen iii oxidase, mitochondrial;
PDBTitle: the 1.58a crystal structure of human coproporphyrinogen oxidase2 reveals the structural basis of hereditary coproporphyria
63d1awca_



not modelled 8.4 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
64c5e5bA_



not modelled 8.2 6
PDB header:transcription
Chain: A: PDB Molecule:fact complex subunit spt16;
PDBTitle: crystal structure of human spt16 n-terminal domain
65c2rf4B_



not modelled 8.2 20
PDB header:transferase
Chain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa4;
PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43
66d1puee_



not modelled 8.1 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
67d1f37b_



not modelled 8.1 29
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioredoxin-like 2Fe-2S ferredoxin
68c5c3qB_



not modelled 8.1 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:thymine dioxygenase;
PDBTitle: crystal structure of the full-length neurospora crassa t7h in complex2 with alpha-kg and thymine (t)
69c3ooxA_



not modelled 8.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative 2og-fe(ii) oxygenase family protein;
PDBTitle: crystal structure of a putative 2og-fe(ii) oxygenase family protein2 (cc_0200) from caulobacter crescentus at 1.44 a resolution
70c4g76A_



not modelled 8.0 31
PDB header:hydrolase
Chain: A: PDB Molecule:phosphodiesterase;
PDBTitle: structure of paem, a colicin m-like bacteriocin produced by2 pseudomonas aeruginosa
71c6fxaF_



not modelled 7.9 25
PDB header:viral protein
Chain: F: PDB Molecule:ci;
PDBTitle: dimerization domain of tp901-1 ci repressor
72c6fxaA_



not modelled 7.9 25
PDB header:viral protein
Chain: A: PDB Molecule:ci;
PDBTitle: dimerization domain of tp901-1 ci repressor
73c6fxaB_



not modelled 7.9 25
PDB header:viral protein
Chain: B: PDB Molecule:ci;
PDBTitle: dimerization domain of tp901-1 ci repressor
74d1k78b_



not modelled 7.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
75c3jtgA_



not modelled 7.9 21
PDB header:transcription
Chain: A: PDB Molecule:ets-related transcription factor elf-3;
PDBTitle: crystal structure of mouse elf3 c-terminal dna-binding domain in2 complex with type ii tgf-beta receptor promoter dna
76c5lunC_



not modelled 7.9 11
PDB header:oxidoreductase
Chain: C: PDB Molecule:2-oxoglutarate-dependent ethylene/succinate-forming enzyme;
PDBTitle: ethylene forming enzyme from pseudomonas syringae pv. phaseolicola -2 p1 ultra-high resolution crystal form in complex with iron, n-3 oxalylglycine and arginine
77d1duxc_



not modelled 7.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
78c3zqjF_



not modelled 7.9 13
PDB header:dna binding protein
Chain: F: PDB Molecule:uvrabc system protein a;
PDBTitle: mycobacterium tuberculosis uvra
79c4avpD_



not modelled 7.8 21
PDB header:transcription
Chain: D: PDB Molecule:ets translocation variant 1;
PDBTitle: crystal structure of the dna-binding domain of human etv1.
80c5h68B_



not modelled 7.8 8
PDB header:dna binding protein, cell cycle
Chain: B: PDB Molecule:chromosome partition protein smc;
PDBTitle: crystal structure of an engaged dimer of the geobacillus2 stearothermophilus smc head domain
81d1umdb2



not modelled 7.8 20
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
82d2stta_



not modelled 7.7 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
83c2nnyA_



not modelled 7.7 21
PDB header:transcription/dna
Chain: A: PDB Molecule:c-ets-1 protein;
PDBTitle: crystal structure of the ets1 dimer dna complex.
84c3zgxA_



not modelled 7.4 8
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein smc;
PDBTitle: crystal structure of the kleisin-n smc interface in2 prokaryotic condensin
85c3b1bA_



not modelled 7.4 20
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase 1;
PDBTitle: the unique structure of wild type carbonic anhydrase alpha-ca1 from2 chlamydomonas reinhardtii
86c6fxaC_



not modelled 7.4 25
PDB header:viral protein
Chain: C: PDB Molecule:ci;
PDBTitle: dimerization domain of tp901-1 ci repressor
87c6fxaE_



not modelled 7.4 25
PDB header:viral protein
Chain: E: PDB Molecule:ci;
PDBTitle: dimerization domain of tp901-1 ci repressor
88c4egeA_



not modelled 7.3 27
PDB header:hydrolase
Chain: A: PDB Molecule:dipeptidase pepe;
PDBTitle: crystal structure of dipeptidase pepe from mycobacterium ulcerans
89d1gvja_



not modelled 7.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
90d2id1a1



not modelled 7.2 23
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Iojap/YbeB-like
91c2p09A_



not modelled 7.2 18
PDB header:de novo protein
Chain: A: PDB Molecule:a non-biological atp binding protein with two mutations
PDBTitle: structural insights into the evolution of a non-biological protein
92c4p3xA_



not modelled 7.2 4
PDB header:transferase
Chain: A: PDB Molecule:quinolinate synthase a;
PDBTitle: structure of the fe4s4 quinolinate synthase nada from thermotoga2 maritima
93d1rrza_



not modelled 7.2 22
Fold:Spectrin repeat-like
Superfamily:Glycogen synthesis protein GlgS
Family:Glycogen synthesis protein GlgS
94c1rrzA_



not modelled 7.2 22
PDB header:structural genomics,biosynthetic protein
Chain: A: PDB Molecule:glycogen synthesis protein glgs;
PDBTitle: solution structure of glgs protein from e. coli
95d1bc8c_



not modelled 7.0 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain
96c1olsB_



not modelled 7.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit;
PDBTitle: roles of his291-alpha and his146-beta' in the reductive acylation2 reaction catalyzed by human branched-chain alpha-ketoacid3 dehydrogenase
97c3zqjC_



not modelled 7.0 13
PDB header:dna binding protein
Chain: C: PDB Molecule:uvrabc system protein a;
PDBTitle: mycobacterium tuberculosis uvra
98d1otja_



not modelled 6.8 5
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:TauD/TfdA-like
99c1w7vD_



not modelled 6.7 25
PDB header:hydrolase
Chain: D: PDB Molecule:xaa-pro aminopeptidase;
PDBTitle: znmg substituted aminopeptidase p from e. coli

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