Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0737_(-)_829210_829707
DateFri Jul 26 01:50:31 BST 2019
Unique Job ID7abbf6aa2cd5bcde
SequenceVASDNRDPIA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.670 Y:53.927 Z:47.979
Model (left) based on template c3zmdD_
Top template information
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
Confidence and coverage
Confidence: 99.9% Coverage: 87%
144 residues ( 87% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3zmdD_
99.9 19
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
2c4b8xB_
99.9 46
PDB header:transcription
Chain: B: PDB Molecule:possible marr-transcriptional regulator;
PDBTitle: near atomic resolution crystal structure of sco5413, a marr family2 transcriptional regulator from streptomyces coelicolor
3c3zplE_
99.9 20
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
4d3broa1
99.9 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
5d2fbka1
99.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
6c3k0lA_
99.9 20
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
7c3bj6B_
99.9 17
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
8c3e6mD_
99.9 16
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
9d2fbha1
99.9 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
10c4mnuA_
99.9 19
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
11c3bjaA_
99.9 23
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
12c5eriA_
99.9 18
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
13c3nqoB_
99.9 14
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
14d1s3ja_
99.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
15d1lj9a_
99.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
16c3bpxB_
99.9 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
17c2gxgA_
99.9 19
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
18c3nrvC_
99.9 20
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
19c5e1xA_
99.9 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the organohalide sensing rdhr-cbdba16252 transcriptional regulator in the 3,4-dichlorophenol bound form
20d2etha1
99.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
21c4xrfA_
not modelled 99.9 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
22c3g3zA_
not modelled 99.9 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
23c4fhtA_
not modelled 99.9 18
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
24d2bv6a1
not modelled 99.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
25d1lnwa_
not modelled 99.9 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
26d2fbia1
not modelled 99.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
27c3boqB_
not modelled 99.9 20
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
28c2nyxB_
not modelled 99.9 22
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
29d1z91a1
not modelled 99.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
30c4em1A_
not modelled 99.9 14
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
31d2a61a1
not modelled 99.8 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
32c2nnnB_
not modelled 99.8 20
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
33c3fm5D_
not modelled 99.8 19
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
34c3cjnA_
not modelled 99.8 25
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
35c5zc2B_
not modelled 99.8 13
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
36d1jgsa_
not modelled 99.8 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
37c2qwwB_
not modelled 99.8 13
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
38c3f3xA_
not modelled 99.8 23
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
39c2rdpA_
not modelled 99.8 20
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
40c3oopA_
not modelled 99.8 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262
41c3jw4C_
not modelled 99.8 16
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator, marr/emrr family;
PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum
42c5jlsA_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
43c3ecoB_
not modelled 99.8 18
PDB header:transcription
Chain: B: PDB Molecule:mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
44c3hrmA_
not modelled 99.8 17
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator sarz;
PDBTitle: crystal structure of staphylococcus aureus protein sarz in sulfenic2 acid form
45c2pexA_
not modelled 99.8 22
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
46c3cdhB_
not modelled 99.8 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3
47c3s2wB_
not modelled 99.8 17
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1
48c5hsmA_
not modelled 99.8 26
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv2887;
PDBTitle: crystal structure of mycobacterium tuberculosis marr family protein2 rv2887
49c5aiqD_
not modelled 99.8 22
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of ligand-free nadr
50c2fa5B_
not modelled 99.8 19
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
51d1p4xa1
not modelled 99.8 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
52c3deuB_
not modelled 99.8 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
53d3deua1
not modelled 99.8 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
54c3kp3B_
not modelled 99.8 13
PDB header:transcription regulator/antibiotic
Chain: B: PDB Molecule:transcriptional regulator tcar;
PDBTitle: staphylococcus epidermidis in complex with ampicillin
55c2fxaB_
not modelled 99.8 22
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
56d2hr3a1
not modelled 99.8 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
57c4yifE_
not modelled 99.8 24
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
58c6c28C_
not modelled 99.8 22
PDB header:dna binding protein
Chain: C: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: transcriptional repressor, cour, bound to p-coumaroyl-coa
59c4q77B_
not modelled 99.8 9
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
60d2frha1
not modelled 99.7 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
61d1hsja1
not modelled 99.7 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
62c4hblA_
not modelled 99.7 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of abfr of staphylococcus epidermidis
63c1p4xA_
not modelled 99.7 16
PDB header:transcription
Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue;
PDBTitle: crystal structure of sars protein from staphylococcus aureus
64d1p4xa2
not modelled 99.7 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
65c4fx0A_
not modelled 99.7 27
PDB header:transcription regulator
Chain: A: PDB Molecule:probable transcriptional repressor protein;
PDBTitle: crystal structure of m. tuberculosis transcriptional regulator mosr
66c5jbrA_
not modelled 99.7 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
67d1ku9a_
not modelled 99.7 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
68c5yhxH_
not modelled 99.7 19
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
69c3bddD_
not modelled 99.7 20
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
70d2fxaa1
not modelled 99.6 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
71c4nb5D_
not modelled 99.6 17
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
72c3tgnA_
not modelled 99.6 18
PDB header:transcription
Chain: A: PDB Molecule:adc operon repressor adcr;
PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state
73d1sfxa_
not modelled 99.5 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
74c3r0aB_
not modelled 99.5 11
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
75d1ub9a_
not modelled 99.4 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
76c1hsjA_
not modelled 99.3 13
PDB header:transcription/sugar binding protein
Chain: A: PDB Molecule:fusion protein consisting of staphylococcus accessory
PDBTitle: sarr mbp fusion structure
77c6cmvA_
not modelled 99.3 21
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
78c2x4hA_
not modelled 99.3 21
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
79d1okra_
not modelled 99.3 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
80c2it0A_
not modelled 99.2 21
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
81d3ctaa1
not modelled 99.2 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
82c1f5tA_
not modelled 99.2 19
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
83c3ctaA_
not modelled 99.1 22
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
84c2wteB_
not modelled 99.1 16
PDB header:antiviral protein
Chain: B: PDB Molecule:csa3;
PDBTitle: the structure of the crispr-associated protein, csa3, from2 sulfolobus solfataricus at 1.8 angstrom resolution.
85c1fx7C_
not modelled 99.0 21
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
86c2h09A_
not modelled 99.0 19
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
87c3hruA_
not modelled 98.9 21
PDB header:transcription
Chain: A: PDB Molecule:metalloregulator scar;
PDBTitle: crystal structure of scar with bound zn2+
88c4o6jA_
not modelled 98.8 14
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
89c1g3wA_
not modelled 98.8 20
PDB header:gene regulation
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: cd-cys102ser dtxr
90c2ev5B_
not modelled 98.8 13
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator mntr;
PDBTitle: bacillus subtilis manganese transport regulator (mntr)2 bound to calcium
91c5cviB_
not modelled 98.7 13
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
92c3f8fA_
not modelled 98.7 17
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
93d2d1ha1
not modelled 98.6 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
94c1xmaA_
not modelled 98.6 20
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulator;
PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
95d1xmaa_
not modelled 98.6 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
96d1sd4a_
not modelled 98.5 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
97c3hhhA_
not modelled 98.5 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
98c5zhcA_
not modelled 98.5 20
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the padr-family transcriptional regulator rv34882 of mycobacterium tuberculosis h37rv
99c3l7wA_
not modelled 98.4 13
PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein smu.1704;
PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
100c3f6oB_
not modelled 98.4 20
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
101c6j05B_
not modelled 98.4 19
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
102c6j0eB_
not modelled 98.3 17
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
103c4hqeB_
not modelled 98.3 13
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator qsrr;
PDBTitle: the crystal structure of qsrr-dna complex
104c2oqgA_
not modelled 98.3 20
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
105c3ri2B_
not modelled 98.3 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243
106c5dymA_
not modelled 98.2 13
PDB header:dna binding protein
Chain: A: PDB Molecule:padr-family transcriptional regulator;
PDBTitle: crystal structure of a padr family transcription regulator from2 hypervirulent clostridium difficile r20291 - cdpadr_0991 to 1.893 angstrom resolution
107c6faqA_
not modelled 98.2 22
PDB header:dna binding protein
Chain: A: PDB Molecule:dna binding protein;
PDBTitle: structure of h. salinarum rosr (vng0258) grown from kbr
108c6o5cB_
not modelled 98.2 13
PDB header:dna binding protein
Chain: B: PDB Molecule:putative metal-dependent transcriptional regulator;
PDBTitle: x-ray crystal structure of metal-dependent transcriptional regulator2 mtsr
109c3f6vA_
not modelled 98.2 19
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
110c5x11G_
not modelled 98.2 14
PDB header:transcription/dna
Chain: G: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of bacillus subtilis padr in complex with operator2 dna
111c2qufB_
not modelled 98.1 17
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
112c5h20A_
not modelled 98.1 18
PDB header:transcription regulator
Chain: A: PDB Molecule:putative padr-family transcriptional regulatory protein;
PDBTitle: x-ray structure of padr-like transcription factor from bacteroid2 fragilis
113c4esbA_
not modelled 98.1 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
114d1ulya_
not modelled 98.1 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
115d2esha1
not modelled 98.1 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
116d1r1ua_
not modelled 98.0 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
117c2kkoB_
not modelled 98.0 16
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
118d2g9wa1
not modelled 98.0 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
119c1r22B_
not modelled 98.0 25
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
120c3pqkD_
not modelled 98.0 15
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite