Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0738_(-)_830065_830613
DateFri Jul 26 01:50:31 BST 2019
Unique Job ID885444544613d98b
SequenceVDPLMAHQRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.758 Y:53.128 Z:33.763
Model (left) based on template c2nsfA_
Top template information
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein cgl3021;
PDBTitle: crystal structure of the mycothiol-dependent maleylpyruvate isomerase
Confidence and coverage
Confidence:100.0% Coverage: 99%
180 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2nsfA_



100.0 19
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein cgl3021;
PDBTitle: crystal structure of the mycothiol-dependent maleylpyruvate isomerase
2d2nsfa1



100.0 21
Fold:DinB/YfiT-like putative metalloenzymes
Superfamily:DinB/YfiT-like putative metalloenzymes
Family:Maleylpyruvate isomerase-like
3c2rd9C_



98.6 13
PDB header:hydrolase
Chain: C: PDB Molecule:bh0186 protein;
PDBTitle: crystal structure of a putative yfit-like metal-dependent hydrolase2 (bh0186) from bacillus halodurans c-125 at 2.30 a resolution
4c5cogB_



98.4 9
PDB header:unknown function
Chain: B: PDB Molecule:irc4;
PDBTitle: crystal structure of yeast irc4
5c6iz2A_



98.4 10
PDB header:unknown function
Chain: A: PDB Molecule:dinb/yfit family protein;
PDBTitle: crystal structure of dinb/yfit protein dr0053 from d. radiodurans r1
6d1rxqa_



98.2 14
Fold:DinB/YfiT-like putative metalloenzymes
Superfamily:DinB/YfiT-like putative metalloenzymes
Family:YfiT-like putative metal-dependent hydrolases
7c5civA_



98.2 13
PDB header:unknown function
Chain: A: PDB Molecule:sibling bacteriocin;
PDBTitle: sibling lethal factor precursor - dfsb
8d2ou6a1



98.0 19
Fold:DinB/YfiT-like putative metalloenzymes
Superfamily:DinB/YfiT-like putative metalloenzymes
Family:DinB-like
9c3cexB_



97.9 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the conserved protein of locus ef_3021 from2 enterococcus faecalis
10c4n6cB_



97.9 10
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the b1rzq2 protein from streptococcus pneumoniae.2 northeast structural genomics consortium (nesg) target spr36.
11c2yqyB_



97.9 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein ttha0303;
PDBTitle: crystal structure of tt2238, a four-helix bundle protein
12c3di5A_



97.8 13
PDB header:metal binding protein
Chain: A: PDB Molecule:dinb-like protein;
PDBTitle: crystal structure of a dinb-like protein (bce_4655) from bacillus2 cereus atcc 10987 at 2.01 a resolution
13c3dkaA_



97.8 9
PDB header:unknown function
Chain: A: PDB Molecule:dinb-like protein;
PDBTitle: crystal structure of a dinb-like protein (yjoa, bsu12410) from2 bacillus subtilis at 2.30 a resolution
14d2p1aa1



97.6 10
Fold:DinB/YfiT-like putative metalloenzymes
Superfamily:DinB/YfiT-like putative metalloenzymes
Family:DinB-like
15c2qe9B_



97.4 7
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein yiza;
PDBTitle: crystal structure of a putative metal-dependent hydrolase (yiza,2 bsu10800) from bacillus subtilis at 1.90 a resolution
16c3e4xB_



97.3 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:apc36150;
PDBTitle: crystal structure of putative metal-dependent hydrolases2 apc36150
17c5cofA_



97.2 17
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterised protein q1r1x2 from escherichia2 coli uti89
18c5cqvB_



97.1 8
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein q8dwv2 from streptococcus2 agalactiae
19d2hkva1



97.0 13
Fold:DinB/YfiT-like putative metalloenzymes
Superfamily:DinB/YfiT-like putative metalloenzymes
Family:DinB-like
20c6anrA_



96.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:colibactin self-protection protein clbs;
PDBTitle: crystal structure of a self resistance protein clbs from colibactin2 biosynthetic gene cluster
21c5wk0A_



not modelled 63.1 12
PDB header:unknown function
Chain: A: PDB Molecule:damage-inducible protein dinb;
PDBTitle: crystal structure of the bacillithiol transferase bsta from2 staphylococcus aureus.
22c2jobA_



not modelled 21.8 60
PDB header:lipid binding protein
Chain: A: PDB Molecule:antilipopolysaccharide factor;
PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site
23c4idiA_



not modelled 10.2 16
PDB header:protein binding
Chain: A: PDB Molecule:oryza sativa rurm1-related;
PDBTitle: crystal structure of rurm1-related protein from plasmodium yoelii,2 py06420
24c2dkzA_



not modelled 7.9 16
PDB header:signaling protein
Chain: A: PDB Molecule:hypothetical protein loc64762;
PDBTitle: solution structure of the sam_pnt-domain of the2 hypothetical protein loc64762
25c2k9xA_



not modelled 7.4 13
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of urm1 from trypanosoma brucei
26d1lbaa_



not modelled 7.1 20
Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
27c5uxtA_



not modelled 6.0 44
PDB header:de novo protein
Chain: A: PDB Molecule:coiled-coil trimer with glu:trp:lys triad;
PDBTitle: coiled-coil trimer with glu:trp:lys triad
28c5uxtC_



not modelled 5.3 44
PDB header:de novo protein
Chain: C: PDB Molecule:coiled-coil trimer with glu:trp:lys triad;
PDBTitle: coiled-coil trimer with glu:trp:lys triad
29d2od5a1



not modelled 5.1 80
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Marine metagenome family WH1

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite