Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0749A_(-)_841740_841877
DateFri Jul 26 01:50:32 BST 2019
Unique Job ID27c924d13b61e132
SequenceVVRKHAFHWR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.112 Y:27.609 Z:21.709
Model (left) based on template c3pg6D_
Top template information
PDB header:ligase
Chain: D: PDB Molecule:e3 ubiquitin-protein ligase dtx3l;
PDBTitle: the carboxyl terminal domain of human deltex 3-like
Confidence and coverage
Confidence: 19.1% Coverage: 49%
22 residues ( 49% of your sequence) have been modelled with 19.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3pg6D_



19.1 27
PDB header:ligase
Chain: D: PDB Molecule:e3 ubiquitin-protein ligase dtx3l;
PDBTitle: the carboxyl terminal domain of human deltex 3-like
2c5wlpA_



18.9 36
PDB header:protein transport
Chain: A: PDB Molecule:autophagy-related protein 32;
PDBTitle: solution structure of the pseudo-receiver domain of atg32
3d1u7ka_



15.0 26
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
4c5z7iC_



11.8 31
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra dna-binding domain(dbd)in complex with2 unmethylated dsdna
5d2pofa1



11.5 18
Fold:HIT-like
Superfamily:HIT-like
Family:CDH-like
6c1z23A_



10.7 27
PDB header:cell adhesion
Chain: A: PDB Molecule:crk-associated substrate;
PDBTitle: the serine-rich domain from crk-associated substrate2 (p130cas)
7c6hwyB_



7.8 26
PDB header:viral protein
Chain: B: PDB Molecule:putative gag polyprotein;
PDBTitle: mature mlv capsid pentamer structure in intact virus particles
8d1h3na1



7.7 18
Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
9c6hwwA_



7.5 26
PDB header:viral protein
Chain: A: PDB Molecule:putative gag polyprotein;
PDBTitle: immature mlv capsid hexamer structure in intact virus particles
10c3cwzB_



7.5 23
PDB header:transport protein
Chain: B: PDB Molecule:rab6-interacting protein 1;
PDBTitle: structure of rab6(gtp)-r6ip1 complex
11c2wj0B_



7.1 50
PDB header:hydrolase/dna
Chain: B: PDB Molecule:archaeal hjc;
PDBTitle: crystal structures of holliday junction resolvases from2 archaeoglobus fulgidus bound to dna substrate
12c2mqbA_



6.9 45
PDB header:hydrolase
Chain: A: PDB Molecule:probable beta-lactamase;
PDBTitle: nmr structure of putative beta-lactamase (np_372339.1) from2 staphylococcus aureus mu50
13c2qxvB_



6.4 55
PDB header:gene regulation
Chain: B: PDB Molecule:enhancer of zeste homolog 2;
PDBTitle: structural basis of ezh2 recognition by eed
14c1iclA_



6.2 44
PDB header:de novo protein
Chain: A: PDB Molecule:th1ox;
PDBTitle: solution structure of designed beta-sheet mini-protein th1ox
15c1yybA_



6.1 56
PDB header:apoptosis
Chain: A: PDB Molecule:programmed cell death protein 5;
PDBTitle: solution structure of 1-26 fragment of human programmed2 cell death 5 protein
16c5graA_



6.1 21
PDB header:transferase
Chain: A: PDB Molecule:trna (cytidine/uridine-2'-o-)-methyltransferase trmj;
PDBTitle: crystal structure of trmj from z. mobilis zm4
17c1e40A_



6.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-amylase;
PDBTitle: tris/maltotriose complex of chimaeric amylase from b.2 amyloliquefaciens and b. licheniformis at 2.2a
18c6bk4A_



6.0 30
PDB header:rna binding protein
Chain: A: PDB Molecule:caprin homolog;
PDBTitle: crystal structure of the hr-1 domain of drosophila caprin in the2 p212121 space group
19d1jr9a2



5.9 23
Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain
Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain
Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
20d1smpi_



5.9 43
Fold:Streptavidin-like
Superfamily:beta-Barrel protease inhibitors
Family:Metalloprotease inhibitor
21d2e1za1



not modelled 5.8 57
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Acetokinase-like
22c3iz6T_



not modelled 5.6 33
PDB header:ribosome
Chain: T: PDB Molecule:40s ribosomal protein s21 (s21e);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
23c2h9aA_



not modelled 5.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:carbon monoxide dehydrogenase corrinoid/iron-sulfur
PDBTitle: corrinoid iron-sulfur protein
24d1g99a1



not modelled 5.1 71
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Acetokinase-like
25c5mduA_



not modelled 5.0 10
PDB header:transcription
Chain: A: PDB Molecule:rpb7-binding protein seb1;
PDBTitle: structure of the rna recognition motif (rrm) of seb1 from s. pombe.

Binding site prediction 

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