Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0755A_(-)_850345_850530
DateFri Jul 26 01:50:33 BST 2019
Unique Job ID7c3853dd1e1dbb2c
SequenceMKELSVAEQR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:36.394 Y:39.558 Z:26.408
Model (left) based on template d2jn6a1
Top template information
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Cgl2762-like
Confidence and coverage
Confidence: 98.9% Coverage: 85%
52 residues ( 85% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2jn6a1
98.9 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Cgl2762-like
2c2rn7A_
98.6 33
PDB header:unknown function
Chain: A: PDB Molecule:is629 orfa;
PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125
3c6paxA_
98.6 23
PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
4d1pdnc_
98.5 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
5d1k78a1
98.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
6d6paxa1
98.2 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
7c1u78A_
98.1 19
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transposable element tc3 transposase;
PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
8c2elhA_
97.9 29
PDB header:dna binding protein
Chain: A: PDB Molecule:cg11849-pa;
PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
9c4fcyA_
97.8 24
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transposase;
PDBTitle: crystal structure of the bacteriophage mu transpososome
10c1hlvA_
97.7 17
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:major centromere autoantigen b;
PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
11c3hosA_
97.5 13
PDB header:transferase, dna binding protein/dna
Chain: A: PDB Molecule:transposable element mariner, complete cds;
PDBTitle: crystal structure of the mariner mos1 paired end complex with mg
12d1hlva1
97.5 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Centromere-binding
13d1bw6a_
97.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Centromere-binding
14c2k27A_
97.1 21
PDB header:transcription regulator
Chain: A: PDB Molecule:paired box protein pax-8;
PDBTitle: solution structure of human pax8 paired box domain
15c3hefB_
97.0 24
PDB header:viral protein
Chain: B: PDB Molecule:gene 1 protein;
PDBTitle: crystal structure of the bacteriophage sf6 terminase small subunit
16c3frwF_
96.9 27
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative trp repressor protein;
PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum
17c3korD_
96.8 23
PDB header:transcription
Chain: D: PDB Molecule:possible trp repressor;
PDBTitle: crystal structure of a putative trp repressor from staphylococcus2 aureus
18c4go1A_
96.7 23
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lsrr;
PDBTitle: crystal structure of full length transcription repressor lsrr from e.2 coli.
19d1ntca_
96.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
20d2oa4a1
96.6 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:SPO1678-like
21c2w48D_
not modelled 96.6 18
PDB header:transcription
Chain: D: PDB Molecule:sorbitol operon regulator;
PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
22c2r0qF_
not modelled 96.4 24
PDB header:recombination/dna
Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3;
PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex
23d2coba1
not modelled 96.4 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Psq domain
24c2jrtA_
not modelled 96.2 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr solution structure of the protein coded by gene2 rhos4_12090 of rhodobacter sphaeroides. northeast3 structural genomics target rhr5
25d1umqa_
not modelled 96.2 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
26c1umqA_
not modelled 96.2 19
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
27d1fipa_
not modelled 96.2 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
28d1jhga_
not modelled 96.2 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR
29d1trra_
not modelled 96.1 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR
30d1etxa_
not modelled 96.0 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
31c3e7lD_
not modelled 96.0 14
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
32c2gm4B_
not modelled 95.6 24
PDB header:recombination, dna
Chain: B: PDB Molecule:transposon gamma-delta resolvase;
PDBTitle: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to2 cleaved dna
33c4l5eA_
not modelled 95.5 16
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
34c2cg4B_
not modelled 95.4 19
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein asnc;
PDBTitle: structure of e.coli asnc
35c2m8eA_
not modelled 95.4 19
PDB header:dna binding protein
Chain: A: PDB Molecule:sleeping beauty transposase;
PDBTitle: nmr structure of the pai subdomain of sleeping beauty transposase
36d1xsva_
not modelled 95.3 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
37d1j5ya1
not modelled 95.3 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
38c2oqgA_
not modelled 95.3 29
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
39c2l0kA_
not modelled 95.3 20
PDB header:transcription
Chain: A: PDB Molecule:stage iii sporulation protein d;
PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna
40c1or7A_
not modelled 95.2 22
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
41c4j2nA_
not modelled 95.1 39
PDB header:viral protein
Chain: A: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
42c4p96B_
not modelled 95.0 28
PDB header:transcription
Chain: B: PDB Molecule:fatty acid metabolism regulator protein;
PDBTitle: fadr, fatty acid responsive transcription factor from vibrio cholerae
43c2gloA_
not modelled 95.0 17
PDB header:transcription/dna
Chain: A: PDB Molecule:brinker cg9653-pa;
PDBTitle: solution structure of the brinker dna binding domain in2 complex with the omb enhancer
44c4j2nB_
not modelled 95.0 41
PDB header:viral protein
Chain: B: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
45d2ezla_
not modelled 95.0 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain
46c2ia0A_
not modelled 95.0 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative hth-type transcriptional regulator pf0864;
PDBTitle: transcriptional regulatory protein pf0864 from pyrococcus furiosus a2 member of the asnc family (pf0864)
47c5m7nA_
not modelled 95.0 30
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
48d1rp3a2
not modelled 94.9 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
49d1ulya_
not modelled 94.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
50c1j5yA_
not modelled 94.9 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, biotin repressor family;
PDBTitle: crystal structure of transcriptional regulator (tm1602) from2 thermotoga maritima at 2.3 a resolution
51c2cfxD_
not modelled 94.9 18
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc;
PDBTitle: structure of b.subtilis lrpc
52c1r22B_
not modelled 94.8 21
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
53d1r1ua_
not modelled 94.8 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
54c5dukA_
not modelled 94.8 26
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
55d1biaa1
not modelled 94.7 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
56c2m8gX_
not modelled 94.6 16
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
57c6ep3B_
not modelled 94.6 30
PDB header:transcription
Chain: B: PDB Molecule:lmo0651 protein;
PDBTitle: lar controls the expression of the listeria monocytogenes agr system2 and mediates virulence.
58c3i4pA_
not modelled 94.6 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, asnc family;
PDBTitle: crystal structure of asnc family transcriptional regulator from2 agrobacterium tumefaciens
59c5uxxC_
not modelled 94.6 24
PDB header:dna binding protein/unknown function
Chain: C: PDB Molecule:rna polymerase sigma factor;
PDBTitle: co-crystal structure of the sigma factor rpoe in complex with the2 anti-sigma factor nepr from bartonella quintana
60c2e7xA_
not modelled 94.6 16
PDB header:transcription regulator
Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator;
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
61c2w7nA_
not modelled 94.5 23
PDB header:transcription/dna
Chain: A: PDB Molecule:trfb transcriptional repressor protein;
PDBTitle: crystal structure of kora bound to operator dna: insight into2 repressor cooperation in rp4 gene regulation
62c2lkpB_
not modelled 94.5 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
63d1r1ta_
not modelled 94.5 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
64c4omzG_
not modelled 94.5 24
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
65c3hugA_
not modelled 94.5 16
PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
66c2o8xA_
not modelled 94.5 23
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
67c3f6oB_
not modelled 94.5 12
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
68c2vbzA_
not modelled 94.4 17
PDB header:dna-binding protein
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
69d1etob_
not modelled 94.3 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
70c2p6tH_
not modelled 94.3 19
PDB header:transcription
Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family;
PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis
71c3mzyA_
not modelled 94.3 13
PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
72c6c03A_
not modelled 94.2 22
PDB header:transcription
Chain: A: PDB Molecule:putative rna polymerase ecf-subfamily sigma factor;
PDBTitle: the crystal structure streptomyces venezuelae rsbn-bldn complex
73d2ao9a1
not modelled 94.2 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Nanomeric phage protein-like
74c2mqkA_
not modelled 94.2 18
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent target dna activator b;
PDBTitle: solution structure of n terminal domain of the mub aaa+ atpase
75c5zx3F_
not modelled 94.1 23
PDB header:transcription
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigh;
PDBTitle: mycobacterium tuberculosis rna polymerase holoenzyme with ecf sigma2 factor sigma h
76c2dbbA_
not modelled 94.1 15
PDB header:transcriptional regulator
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061;
PDBTitle: crystal structure of ph0061
77c2di3A_
not modelled 94.0 28
PDB header:transcription
Chain: A: PDB Molecule:bacterial regulatory proteins, gntr family;
PDBTitle: crystal structure of the transcriptional factor cgl29152 from corynebacterium glutamicum
78d2isya1
not modelled 94.0 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
79c5z4yB_
not modelled 93.8 20
PDB header:dna binding protein
Chain: B: PDB Molecule:cys regulon transcriptional activator;
PDBTitle: crystal structure of pacysb ntd domain with space group p4
80c3vdoA_
not modelled 93.8 12
PDB header:dna binding protein/protein binding
Chain: A: PDB Molecule:rna polymerase sigma factor sigk;
PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
81c5j9iH_
not modelled 93.8 22
PDB header:antitoxin
Chain: H: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higa2 antitoxin c-terminal domain
82c1i1gA_
not modelled 93.8 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lrpa;
PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus
83c6az6B_
not modelled 93.8 20
PDB header:transcription
Chain: B: PDB Molecule:gntr family transcriptional regulator;
PDBTitle: streptococcus agalactiae gntr
84c2e1cA_
not modelled 93.7 11
PDB header:transcription/dna
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519;
PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
85c3vepA_
not modelled 93.7 29
PDB header:membrane protein/transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-d factor;
PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda
86c1e2xA_
not modelled 93.7 24
PDB header:transcriptional regulation
Chain: A: PDB Molecule:fatty acid metabolism regulator protein;
PDBTitle: fadr, fatty acid responsive transcription factor from e.2 coli
87d1or7a1
not modelled 93.6 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
88c6j05B_
not modelled 93.6 22
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
89c2jscB_
not modelled 93.6 22
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
90c6dvdF_
not modelled 93.6 18
PDB header:transferase/dna
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigl;
PDBTitle: crystal structure of mycobacterium tuberculosis transcription2 initiation complex(ecf sigma factor l) with 6 nt spacer and bromine3 labelled in position "-11
91d1g3wa1
not modelled 93.5 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
92c4cxfA_
not modelled 93.5 27
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor cnrh;
PDBTitle: structure of cnrh in complex with the cytosolic domain of cnry
93d1s7oa_
not modelled 93.5 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
94c3jthA_
not modelled 93.4 27
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
95c3f6vA_
not modelled 93.4 22
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
96c3fmsA_
not modelled 93.4 23
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: crystal structure of tm0439, a gntr transcriptional regulator
97c5fgmA_
not modelled 93.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigr;
PDBTitle: streptomyces coelicolor sigr region 4
98c2kpjA_
not modelled 93.3 23
PDB header:transcription regulator
Chain: A: PDB Molecule:sos-response transcriptional repressor, lexa;
PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
99c3b7hA_
not modelled 93.3 20
PDB header:structural protein
Chain: A: PDB Molecule:prophage lp1 protein 11;
PDBTitle: crystal structure of the prophage lp1 protein 11
100d1vz0a1
not modelled 93.2 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:KorB DNA-binding domain-like
Family:KorB DNA-binding domain-like
101d1stza1
not modelled 93.2 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Heat-inducible transcription repressor HrcA, N-terminal domain
102d2cyya1
not modelled 93.1 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
103c2lfwA_
not modelled 93.1 21
PDB header:signaling protein
Chain: A: PDB Molecule:phyr sigma-like domain;
PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1
104d1g2ha_
not modelled 93.1 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
105c1g2hA_
not modelled 93.1 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
106d1jhfa1
not modelled 93.0 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
107c2gqqB_
not modelled 93.0 17
PDB header:transcription
Chain: B: PDB Molecule:leucine-responsive regulatory protein;
PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp)
108d2cg4a1
not modelled 93.0 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
109c6j0eB_
not modelled 93.0 17
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
110c4pcqC_
not modelled 92.9 22
PDB header:transcription
Chain: C: PDB Molecule:possible transcriptional regulatory protein (probably
PDBTitle: crystal structure of mtbaldr (rv2779c)
111c2hs5A_
not modelled 92.8 19
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcriptional regulator gntr;
PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator gntr from rhodococcus sp. rha1
112c4egzA_
not modelled 92.7 26
PDB header:transcription/dna
Chain: A: PDB Molecule:arabinose metabolism transcriptional repressor;
PDBTitle: crystal structure of arar(dbd) in complex with operator orr3
113c1iufA_
not modelled 92.7 7
PDB header:dna binding protein
Chain: A: PDB Molecule:centromere abp1 protein;
PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein
114c2l4aA_
not modelled 92.6 21
PDB header:dna binding protein
Chain: A: PDB Molecule:leucine responsive regulatory protein;
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
115c2kkoB_
not modelled 92.5 19
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
116d1i1ga1
not modelled 92.5 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
117c5wurB_
not modelled 92.4 16
PDB header:metal binding protein
Chain: B: PDB Molecule:ecf rna polymerase sigma factor sigw;
PDBTitle: crystal structure of sigw in complex with its anti-sigma rsiw, an2 oxdized form
118c1rp3G_
not modelled 92.4 15
PDB header:transcription
Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia);
PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma complex, sigma-2 28/flgm
119c6amaO_
not modelled 92.4 26
PDB header:dna binding protein/dna
Chain: O: PDB Molecule:putative dna-binding protein;
PDBTitle: structure of s. coelicolor/s. venezuelae bldc-smea-ssfa complex to2 3.09 angstrom
120c2jvlA_
not modelled 92.4 6
PDB header:transcription
Chain: A: PDB Molecule:trmbf1;
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei

Binding site prediction 

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