Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0779c_(-)_872675_873295
DateFri Jul 26 01:50:36 BST 2019
Unique Job IDa53b84756140b8c7
SequenceMRSRFLPYAT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.460 Y:15.841 Z:55.246
Model (left) based on template c4wpyA_
Top template information
PDB header:de novo protein
Chain: A: PDB Molecule:protein dl-rv1738;
PDBTitle: racemic crystal structure of rv1738 from mycobacterium tuberculosis2 (form-ii)
Confidence and coverage
Confidence: 28.3% Coverage: 17%
34 residues ( 17% of your sequence) have been modelled with 28.3% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4wpyA_



28.3 18
PDB header:de novo protein
Chain: A: PDB Molecule:protein dl-rv1738;
PDBTitle: racemic crystal structure of rv1738 from mycobacterium tuberculosis2 (form-ii)
2d1gr0a1



27.0 44
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
3d2fgga1



26.3 15
Fold:dsRBD-like
Superfamily:Rv2632c-like
Family:Rv2632c-like
4c5ydcA_



23.8 19
PDB header:transcription regulator
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv1828;
PDBTitle: crystal structure of mercury soaked c-terminal domain of rv1828 from2 mycobacterium tuberculosis
5d2axtm1



17.4 8
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein M, PsbM
Family:PsbM-like
6c3a0hm_



14.3 8
PDB header:electron transport
Chain: M: PDB Molecule:photosystem ii reaction center protein m;
PDBTitle: crystal structure of i-substituted photosystem ii complex
7d1q90b_



11.8 20
Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
8c2l35B_



11.2 21
PDB header:protein binding
Chain: B: PDB Molecule:tyro protein tyrosine kinase-binding protein;
PDBTitle: structure of the dap12-nkg2c transmembrane heterotrimer
9c2l34B_



11.0 21
PDB header:protein binding
Chain: B: PDB Molecule:tyro protein tyrosine kinase-binding protein;
PDBTitle: structure of the dap12 transmembrane homodimer
10c4wolA_



11.0 21
PDB header:signaling protein
Chain: A: PDB Molecule:tyro protein tyrosine kinase-binding protein;
PDBTitle: crystal structure of the dap12 transmembrane domain in lipidic cubic2 phase
11c2l34A_



11.0 21
PDB header:protein binding
Chain: A: PDB Molecule:tyro protein tyrosine kinase-binding protein;
PDBTitle: structure of the dap12 transmembrane homodimer
12c4h1wB_



8.4 25
PDB header:hydrolase/hydrolase regulator
Chain: B: PDB Molecule:sarcolipin;
PDBTitle: e1 structure of the (sr) ca2+-atpase in complex with sarcolipin
13c3w5aC_



8.4 25
PDB header:metal transport/membrane protein
Chain: C: PDB Molecule:sarcolipin;
PDBTitle: crystal structure of the calcium pump and sarcolipin from rabbit fast2 twitch skeletal muscle in the e1.mg2+ state
14d1vp5a_



8.2 18
Fold:TIM beta/alpha-barrel
Superfamily:NAD(P)-linked oxidoreductase
Family:Aldo-keto reductases (NADP)
15c1k6nH_



7.5 8
PDB header:photosynthesis
Chain: H: PDB Molecule:photosynthetic reaction center h subunit;
PDBTitle: e(l212)a,d(l213)a double mutant structure of photosynthetic reaction2 center from rhodobacter sphaeroides
16c4v1aq_



6.9 33
PDB header:ribosome
Chain: Q: PDB Molecule:
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 22 of 2
17c1eysH_



5.9 8
PDB header:electron transport
Chain: H: PDB Molecule:photosynthetic reaction center;
PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
18d1nbwa3



5.8 20
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:ATPase domain of dehydratase reactivase alpha subunit
19c2i5nH_



5.7 33
PDB header:photosynthesis
Chain: H: PDB Molecule:reaction center protein h chain;
PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique
20c1yybA_



5.5 37
PDB header:apoptosis
Chain: A: PDB Molecule:programmed cell death protein 5;
PDBTitle: solution structure of 1-26 fragment of human programmed2 cell death 5 protein
21d1zara1



not modelled 5.4 31
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Rio2 serine protein kinase N-terminal domain

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below