Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0780_(hemH)_873346_874239
DateFri Jul 26 01:50:36 BST 2019
Unique Job ID6946e57a4dcebb7e
SequenceMRPALSDYQH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.375 Y:44.677 Z:51.498
Model (left) based on template c3r9rA_
Top template information
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: structure of a phosphoribosylaminoimidazole-succinocarboxamide2 synthase from mycobacterium abscessus atcc 19977 / dsm 44196
Confidence and coverage
Confidence:100.0% Coverage: 99%
293 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r9rA_



100.0 76
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: structure of a phosphoribosylaminoimidazole-succinocarboxamide2 synthase from mycobacterium abscessus atcc 19977 / dsm 44196
2d2cnqa1



100.0 44
Fold:SAICAR synthase-like
Superfamily:SAICAR synthase-like
Family:SAICAR synthase
3c2z02A_



100.0 29
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide
PDBTitle: crystal structure of2 phosphoribosylaminoimidazolesuccinocarboxamide synthase3 wit atp from methanocaldococcus jannaschii
4c2ywvB_



100.0 29
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole succinocarboxamide synthetase;
PDBTitle: crystal structure of saicar synthetase from geobacillus kaustophilus
5c3kreA_



100.0 23
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: crystal structure of phosphoribosylaminoimidazole-succinocarboxamide2 synthase from ehrlichia chaffeensis at 1.8a resolution
6c2gqsA_



100.0 28
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: saicar synthetase complexed with cair-mg2+ and adp
7c3nuaB_



100.0 25
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: crystal structure of phosphoribosylaminoimidazole-succinocarboxamide2 synthase from clostridium perfringens
8c3u54B_



100.0 30
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: crystal structure (type-1) of saicar synthetase from pyrococcus2 horikoshii ot3
9c4fe2B_



100.0 30
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole-succinocarboxamide synthase;
PDBTitle: x-ray structure of saicar synthetase (purc) from streptococcus2 pneumoniae complexed with air, adp, asp and mg2+
10c4ja0A_



100.0 27
PDB header:protein binding
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase;
PDBTitle: crystal structure of the invertebrate bi-functional purine2 biosynthesis enzyme paics at 2.8 a resolution
11d1kuta_



100.0 29
Fold:SAICAR synthase-like
Superfamily:SAICAR synthase-like
Family:SAICAR synthase
12c2h31A_



100.0 26
PDB header:ligase, lyase
Chain: A: PDB Molecule:multifunctional protein ade2;
PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis
13d2bcgg2



57.9 14
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:GDI-like N domain
14c6g51v_



32.2 12
PDB header:ribosome
Chain: V: PDB Molecule:40s ribosomal protein s21;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state d
15c4im2A_



29.2 12
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:serine/threonine-protein kinase tbk1;
PDBTitle: structure of tank-binding kinase 1
16c1zp9A_



27.7 7
PDB header:transferase
Chain: A: PDB Molecule:rio1 kinase;
PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions.
17c4l8nA_



25.4 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pdz domain protein;
PDBTitle: crystal structure of a pdz domain protein (bdi_1242) from2 parabacteroides distasonis atcc 8503 at 2.50 a resolution
18c5hb8B_



24.8 46
PDB header:transport protein
Chain: B: PDB Molecule:nucleoporin nup53;
PDBTitle: crystal structure of chaetomium thermophilum nup53 rrm (space group2 p3121)
19d2r7ka2



23.5 10
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
20c5c4iC_



21.7 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxalate oxidoreductase subunit beta;
PDBTitle: structure of an oxalate oxidoreductase
21c5aj3k_



not modelled 21.4 24
PDB header:ribosome
Chain: K: PDB Molecule:mitoribosomal protein us11m, mrps11;
PDBTitle: structure of the small subunit of the mammalian mitoribosome
22c3c0uA_



not modelled 18.7 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yaeq;
PDBTitle: crystal structure of e.coli yaeq protein
23d2g3wa1



not modelled 18.2 21
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:YaeQ-like
24c3byvA_



not modelled 17.6 16
PDB header:transferase
Chain: A: PDB Molecule:rhoptry kinase;
PDBTitle: crystal structure of toxoplasma gondii specific rhoptry2 antigen kinase domain
25d1xyqa_



not modelled 16.5 25
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
26c1dx0A_



not modelled 15.2 20
PDB header:prion protein
Chain: A: PDB Molecule:prion protein;
PDBTitle: bovine prion protein residues 23-230
27d1i4ma_



not modelled 15.2 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
28d1dwya_



not modelled 15.1 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
29d1nkta1



not modelled 14.9 42
Fold:Pre-protein crosslinking domain of SecA
Superfamily:Pre-protein crosslinking domain of SecA
Family:Pre-protein crosslinking domain of SecA
30c1fo7A_



not modelled 14.5 20
PDB header:membrane protein
Chain: A: PDB Molecule:prion protein;
PDBTitle: human prion protein mutant e200k fragment 90-231
31d1fo7a_



not modelled 14.5 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
32d1xyua_



not modelled 13.4 25
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
33d1tqba_



not modelled 13.2 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
34d1tf5a1



not modelled 13.1 30
Fold:Pre-protein crosslinking domain of SecA
Superfamily:Pre-protein crosslinking domain of SecA
Family:Pre-protein crosslinking domain of SecA
35c3dzoA_



not modelled 13.0 16
PDB header:transferase
Chain: A: PDB Molecule:rhoptry kinase domain;
PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii
36d1b10a_



not modelled 12.8 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
37d1pmia_



not modelled 12.1 24
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Type I phosphomannose isomerase
38d1xyxa_



not modelled 12.0 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
39c1xu0A_



not modelled 11.8 40
PDB header:membrane protein
Chain: A: PDB Molecule:prion protein;
PDBTitle: solution structure of xenopus leavis prion protein
40d1xu0a_



not modelled 11.8 40
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
41d1u3ma_



not modelled 11.3 40
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
42c6c87A_



not modelled 10.8 40
PDB header:protein transport
Chain: A: PDB Molecule:rab gdp dissociation inhibitor alpha;
PDBTitle: crystal structure of rab gdp dissociation inhibitor alpha from2 naegleria fowleri
43c6m7zE_



not modelled 9.9 10
PDB header:transferase
Chain: E: PDB Molecule:bradyzoite pseudokinase 1;
PDBTitle: a divergent kinase lacking the glycine-rich loop regulates membrane2 ultrastructure of the toxoplasma parasitophorous vacuole
44c1ehiB_



not modelled 9.7 17
PDB header:ligase
Chain: B: PDB Molecule:d-alanine:d-lactate ligase;
PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides
45d2ot9a1



not modelled 9.6 13
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:YaeQ-like
46d2d6fa1



not modelled 9.5 24
Fold:Sm-like fold
Superfamily:GatD N-terminal domain-like
Family:GatD N-terminal domain-like
47d1xyka_



not modelled 9.2 25
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
48d1y0na_



not modelled 9.0 10
Fold:YehU-like
Superfamily:YehU-like
Family:YehU-like
49c5c5tB_



not modelled 8.9 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:prolyl 4-hydroxylase;
PDBTitle: the crystal structure of viral collagen prolyl hydroxylase vcph from2 paramecium bursaria chlorella virus-1 - 2og complex
50d1uw3a_



not modelled 8.8 10
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
51c5lnkh_



not modelled 8.8 33
PDB header:oxidoreductase
Chain: H: PDB Molecule:mitochondrial complex i, nd1 subunit;
PDBTitle: entire ovine respiratory complex i
52c3h1yA_



not modelled 8.8 24
PDB header:isomerase
Chain: A: PDB Molecule:mannose-6-phosphate isomerase;
PDBTitle: crystal structure of mannose 6-phosphate isomerase from2 salmonella typhimurium bound to substrate (f6p)and metal3 atom (zn)
53c6cp8D_



not modelled 8.8 25
PDB header:toxin/antitoxin
Chain: D: PDB Molecule:cdii;
PDBTitle: contact-dependent growth inhibition toxin-immunity protein complex2 from from e. coli 3006
54c5x62A_



not modelled 8.5 43
PDB header:transferase
Chain: A: PDB Molecule:carnosine n-methyltransferase;
PDBTitle: crystal structure of a carnosine n-methyltransferase bound by adohcy
55c5yf1A_



not modelled 8.4 86
PDB header:transferase
Chain: A: PDB Molecule:carnosine n-methyltransferase;
PDBTitle: crystal structure of carnmt1 bound to carnosine and sfg
56d2amha1



not modelled 8.2 6
Fold:Anticodon-binding domain-like
Superfamily:ITPase-like
Family:Maf-like
57c2pvpB_



not modelled 7.7 20
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori
58c2c4rL_



not modelled 7.6 35
PDB header:hydrolase
Chain: L: PDB Molecule:ribonuclease e;
PDBTitle: catalytic domain of e. coli rnase e
59c2mduA_



not modelled 6.9 14
PDB header:isomerase
Chain: A: PDB Molecule:pin1 ww domain;
PDBTitle: circular permutant of the ww domain with loop 1 excised
60c3j3aK_



not modelled 6.9 50
PDB header:ribosome
Chain: K: PDB Molecule:40s ribosomal protein s10;
PDBTitle: structure of the human 40s ribosomal proteins
61c5yk2A_



not modelled 6.8 15
PDB header:transport protein
Chain: A: PDB Molecule:probable conserved atp-binding protein abc transporter;
PDBTitle: the complex structure of rv3197-erythromycin from mycobacterium2 tuberculosis
62c3q2oB_



not modelled 6.5 13
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase
63c5xxuK_



not modelled 6.4 36
PDB header:ribosome
Chain: K: PDB Molecule:ribosomal protein es10;
PDBTitle: small subunit of toxoplasma gondii ribosome
64c3um2E_



not modelled 6.3 44
PDB header:membrane protein/transport protein
Chain: E: PDB Molecule:charged multivesicular body protein 5;
PDBTitle: crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
65c3um2B_



not modelled 6.3 44
PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:charged multivesicular body protein 5;
PDBTitle: crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
66c3um1E_



not modelled 6.3 44
PDB header:membrane protein/transport protein
Chain: E: PDB Molecule:charged multivesicular body protein 5;
PDBTitle: crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
67d1u5la_



not modelled 6.3 20
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
68c3um0B_



not modelled 6.2 44
PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:charged multivesicular body protein 5;
PDBTitle: crystal structure of the brox bro1 domain in complex with the c-2 terminal tail of chmp5
69d1i4ya_



not modelled 6.0 11
Fold:Four-helical up-and-down bundle
Superfamily:Hemerythrin-like
Family:Hemerythrin-like
70c1jrjA_



not modelled 5.8 42
PDB header:hormone/growth factor
Chain: A: PDB Molecule:exendin-4;
PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol
71c5wsxA_



not modelled 5.7 63
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of sav606
72c3g5oA_



not modelled 5.6 28
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:uncharacterized protein rv2865;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
73c2mdwA_



not modelled 5.6 15
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein;
PDBTitle: nmr structure of a strand-swapped dimer of the ww domain
74c4qiwV_



not modelled 5.6 18
PDB header:transcription
Chain: V: PDB Molecule:dna-directed rna polymerase subunit n;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
75d1twfj_



not modelled 5.6 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:RNA polymerase subunit RPB10
Family:RNA polymerase subunit RPB10
76c4egjD_



not modelled 5.5 17
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from burkholderia2 xenovorans
77c1e4eB_



not modelled 5.4 21
PDB header:ligase
Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana;
PDBTitle: d-alanyl-d-lacate ligase
78c2rukA_



not modelled 5.2 22
PDB header:transcription
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: solution structure of the complex between p53 transactivation domain 22 and tfiih p62 ph domain

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