Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0787A_(-)_882527_882766
DateFri Jul 26 01:50:37 BST 2019
Unique Job ID6dacd63e108d95a4
SequenceVARVVVHVMP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.001 Y:30.273 Z:30.688
Model (left) based on template c2yx5A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0062 protein mj1593;
PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
Confidence and coverage
Confidence:100.0% Coverage: 97%
77 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2yx5A_



100.0 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0062 protein mj1593;
PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
2d1t4aa_



100.0 40
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
3d1vq3a_



100.0 25
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
4c2zw2B_



100.0 22
PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein sts178;
PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs)
5d1gtda_



100.0 25
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
6c2dgbA_



100.0 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein purs;
PDBTitle: structure of thermus thermophilus purs in the p21 form
7c1t3tA_



96.7 12
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylformylglycinamidine synthase;
PDBTitle: structure of formylglycinamide synthetase
8c5y02D_



77.3 20
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
9d1tr0a_



69.6 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
10c3bn7A_



68.6 16
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (cc_2267) from2 caulobacter crescentus cb15 at 1.64 a resolution
11c3bguA_



63.5 15
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein of unknown function;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution
12c2lepA_



58.4 19
PDB header:hydrolase
Chain: A: PDB Molecule:rhomboid protease glpg 1;
PDBTitle: solution structure of n-terminal cytosolic domain of rhomboid2 intramembrane protease from escherichia coli
13d1p6ta1



55.6 21
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
14d1afia_



55.2 15
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
15c2qycA_



54.1 15
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
16c5b0aA_



51.6 24
PDB header:lyase
Chain: A: PDB Molecule:olivetolic acid cyclase;
PDBTitle: polyketide cyclase oac from cannabis sativa, h5q mutant
17d2qifa1



51.3 23
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
18c2ofgX_



49.0 15
PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
19d1s6ua_



47.3 6
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
20c3ihsB_



46.1 12
PDB header:transport protein
Chain: B: PDB Molecule:phosphocarrier protein hpr;
PDBTitle: crystal structure of a phosphocarrier protein hpr from2 bacillus anthracis str. ames
21d1q8la_



not modelled 45.5 4
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
22c2ldiA_



not modelled 44.1 15
PDB header:hydrolase
Chain: A: PDB Molecule:zinc-transporting atpase;
PDBTitle: nmr solution structure of ziaan sub mutant
23c2ofhX_



not modelled 43.6 15
PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
24d1q4ra_



not modelled 43.6 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
25d1kvja_



not modelled 43.3 12
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
26c2lqbA_



not modelled 42.2 8
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: metal binding repeat 2 of the wilson disease protein (atp7b)
27c6ff2A_



not modelled 42.0 14
PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone copz;
PDBTitle: copz metallochaperone
28c5t17A_



not modelled 41.6 23
PDB header:transferase
Chain: A: PDB Molecule:phosphocarrier protein npr;
PDBTitle: nmr structure of the e. coli protein npr, residues 1-85
29d1pcha_



not modelled 41.5 14
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
30d2aw0a_



not modelled 40.9 19
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
31d1ka5a_



not modelled 40.3 12
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
32d1cm3a_



not modelled 40.3 8
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
33d1ptfa_



not modelled 40.1 32
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
34c2rmlA_



not modelled 39.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting p-type atpase copa;
PDBTitle: solution structure of the n-terminal soluble domains of2 bacillus subtilis copa
35d1osda_



not modelled 39.7 15
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
36c2l3mA_



not modelled 39.6 19
PDB header:metal binding protein
Chain: A: PDB Molecule:copper-ion-binding protein;
PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames
37d1qr5a_



not modelled 38.3 12
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
38c2kkhA_



not modelled 37.9 23
PDB header:metal transport
Chain: A: PDB Molecule:putative heavy metal transporter;
PDBTitle: structure of the zinc binding domain of the atpase hma4
39d1p6ta2



not modelled 36.9 19
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
40c2ew9A_



not modelled 35.8 23
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of apowln5-6
41c1y3kA_



not modelled 35.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the fifth domain of2 menkes protein
42d2nzul1



not modelled 35.0 11
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
43c2ga7A_



not modelled 33.5 15
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein)
44c3bb5B_



not modelled 33.3 22
PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
45c3le1B_



not modelled 32.9 15
PDB header:transferase
Chain: B: PDB Molecule:phosphotransferase system, hpr-related proteins;
PDBTitle: crystal structure of apohpr monomer from thermoanaerobacter2 tengcongensis
46c4u9rA_



not modelled 32.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:czcp cation efflux p1-atpase;
PDBTitle: structure of the n-terminal extension from cupriavidus metallidurans2 czcp
47c3dxsX_



not modelled 31.7 12
PDB header:hydrolase
Chain: X: PDB Molecule:copper-transporting atpase ran1;
PDBTitle: crystal structure of a copper binding domain from hma7, a p-2 type atpase
48d2fgca2



not modelled 29.8 23
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
49d2hpra_



not modelled 29.1 10
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
50c5o5jF_



not modelled 28.5 18
PDB header:ribosome
Chain: F: PDB Molecule:30s ribosomal protein s6;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
51c1yjrA_



not modelled 27.2 27
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the sixth soluble2 domain a69p mutant of menkes protein
52d1mo1a_



not modelled 27.0 16
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
53d1t3ta3



not modelled 27.0 15
Fold:PurS-like
Superfamily:PurS-like
Family:FGAM synthase PurL, PurS-like domain
54d1zvvj1



not modelled 26.5 15
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
55d1ffgb_



not modelled 24.7 10
Fold:Ferredoxin-like
Superfamily:CheY-binding domain of CheA
Family:CheY-binding domain of CheA
56c1a0oH_



not modelled 24.3 10
PDB header:chemotaxis
Chain: H: PDB Molecule:chea;
PDBTitle: chey-binding domain of chea in complex with chey
57d2hmfa3



not modelled 23.4 25
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Aspartokinase allosteric domain-like
58c2n7yA_



not modelled 22.0 15
PDB header:metal binding protein
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: nmr structure of metal-binding domain 1 of atp7b
59c3bdeA_



not modelled 21.9 15
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
60d1cpza_



not modelled 21.9 19
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
61d1cuka1



not modelled 20.7 24
Fold:RuvA C-terminal domain-like
Superfamily:DNA helicase RuvA subunit, C-terminal domain
Family:DNA helicase RuvA subunit, C-terminal domain
62c3gkuB_



not modelled 20.7 7
PDB header:rna binding protein
Chain: B: PDB Molecule:probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
63c3fmbA_



not modelled 19.9 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
64d2ggpb1



not modelled 19.3 16
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
65d2pc6a2



not modelled 17.7 14
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
66c2kt2A_



not modelled 17.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:mercuric reductase;
PDBTitle: structure of nmera, the n-terminal hma domain of tn501 mercuric2 reductase
67d2f1fa1



not modelled 16.0 16
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
68c2fgcA_



not modelled 15.8 23
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase, small subunit;
PDBTitle: crystal structure of acetolactate synthase- small subunit from2 thermotoga maritima
69c3r9lA_



not modelled 14.9 15
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site
70d1ogda_



not modelled 14.5 36
Fold:RbsD-like
Superfamily:RbsD-like
Family:RbsD-like
71c3lfkC_



not modelled 14.0 18
PDB header:unknown function
Chain: C: PDB Molecule:marr like protein, tvg0766549;
PDBTitle: a reported archaeal mechanosensitive channel is a structural2 homolog of marr-like transcriptional regulators
72c2gcfA_



not modelled 13.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:cation-transporting atpase pacs;
PDBTitle: solution structure of the n-terminal domain of the coppper(i) atpase2 pacs in its apo form
73c1yg0A_



not modelled 12.9 30
PDB header:metal transport
Chain: A: PDB Molecule:cop associated protein;
PDBTitle: solution structure of apo-copp from helicobacter pylori
74c3bjvA_



not modelled 12.6 6
PDB header:transferase
Chain: A: PDB Molecule:rmpa;
PDBTitle: the crystal structure of a putative pts iia(ptxa) from streptococcus2 mutans
75d1sjpa3



not modelled 12.6 27
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:GroEL-like chaperone, intermediate domain
76c2pc6C_



not modelled 11.4 15
PDB header:lyase
Chain: C: PDB Molecule:probable acetolactate synthase isozyme iii (small subunit);
PDBTitle: crystal structure of putative acetolactate synthase- small subunit2 from nitrosomonas europaea
77d1iuea_



not modelled 11.0 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
78c3dluA_



not modelled 10.9 24
PDB header:rna binding protein
Chain: A: PDB Molecule:signal recognition particle 19 kda protein;
PDBTitle: structures of srp54 and srp19, the two proteins assembling the2 ribonucleic core of the signal recognition particle from the archaeon3 pyrococcus furiosus.
79c2e1aD_



not modelled 10.3 10
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
80d1lnga_



not modelled 10.3 32
Fold:SRP19
Superfamily:SRP19
Family:SRP19
81c3bkhA_



not modelled 9.9 8
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
82c3bqsB_



not modelled 9.7 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from2 listeria monocytogenes, trigonal form
83c5xq0B_



not modelled 9.3 11
PDB header:signaling protein
Chain: B: PDB Molecule:fermitin family homolog 2,integrin beta-1;
PDBTitle: structural basis of kindlin-mediated integrin recognition and2 activation
84d1lbua1



not modelled 9.2 0
Fold:PGBD-like
Superfamily:PGBD-like
Family:Peptidoglycan binding domain, PGBD
85c6mk7A_



not modelled 9.2 8
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: solution structure of the large extracellular loop of ftsx in2 streptococcus pneumoniae
86c3ktwA_



not modelled 9.0 22
PDB header:rna/rna binding protein
Chain: A: PDB Molecule:signal recognition particle 19 kda protein;
PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus
87d1mwza_



not modelled 9.0 21
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
88c3twkB_



not modelled 8.8 35
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
89c4c9yB_



not modelled 8.8 19
PDB header:cell cycle
Chain: B: PDB Molecule:spindle and kinetochore-associated protein 1;
PDBTitle: structural basis for the microtubule binding of the human2 kinetochore ska complex
90c3oxpA_



not modelled 8.8 14
PDB header:transferase
Chain: A: PDB Molecule:phosphotransferase enzyme ii, a component;
PDBTitle: structure of phosphotransferase enzyme ii, a component from yersinia2 pestis co92 at 1.2 a resolution
91c3oxpB_



not modelled 8.8 14
PDB header:transferase
Chain: B: PDB Molecule:phosphotransferase enzyme ii, a component;
PDBTitle: structure of phosphotransferase enzyme ii, a component from yersinia2 pestis co92 at 1.2 a resolution
92c2f1fA_



not modelled 8.6 16
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase isozyme iii small subunit;
PDBTitle: crystal structure of the regulatory subunit of acetohydroxyacid2 synthase isozyme iii from e. coli
93d1szpa1



not modelled 8.4 26
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
94c1x60A_



not modelled 8.4 4
PDB header:hydrolase
Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine
PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc
95c2ec4A_



not modelled 8.1 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:fas-associated factor 1;
PDBTitle: solution structure of the uas domain from human fas-2 associated factor 1
96d1zcza1



not modelled 8.1 30
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Inosicase
97c3l7pA_



not modelled 7.9 15
PDB header:transcription
Chain: A: PDB Molecule:putative nitrogen regulatory protein pii;
PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans
98c3fp5A_



not modelled 7.9 20
PDB header:lipid binding protein
Chain: A: PDB Molecule:acyl-coa binding protein;
PDBTitle: crystal structure of acbp from moniliophthora perniciosa
99c2mjfB_



not modelled 7.8 23
PDB header:protein binding
Chain: B: PDB Molecule:protein hit1;
PDBTitle: solution structure of the complex between the yeast rsa1 and hit12 proteins

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