Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0790c_(-)_884075_884803
DateFri Jul 26 01:50:37 BST 2019
Unique Job ID9214ab8494f7895c
SequenceMTLANNGTGM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.774 Y:39.110 Z:46.953
Model (left) based on template c3isrB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:transglutaminase-like enzymes, putative cysteine protease;
PDBTitle: the crystal structure of a putative cysteine protease from cytophaga2 hutchinsonii to 1.9a
Confidence and coverage
Confidence:100.0% Coverage: 60%
146 residues ( 60% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3isrB_



100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:transglutaminase-like enzymes, putative cysteine protease;
PDBTitle: the crystal structure of a putative cysteine protease from cytophaga2 hutchinsonii to 1.9a
2c6g49A_



100.0 18
PDB header:transferase
Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase;
PDBTitle: crystal structure of the periplasmic domain of tgpa from pseudomonas2 aeruginosa
3c4xz7A_



99.9 21
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a tgase
4c3kd4A_



99.7 13
PDB header:hydrolase
Chain: A: PDB Molecule:putative protease;
PDBTitle: crystal structure of a putative protease (bdi_1141) from2 parabacteroides distasonis atcc 8503 at 2.00 a resolution
5d2q3za4



99.7 21
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
6d1g0da4



99.6 22
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
7d2f4ma1



99.6 30
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
8d1vjja4



99.6 23
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
9d1ex0a4



99.5 27
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
10d1x3za1



99.2 20
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
11c1kv3F_



99.2 21
PDB header:transferase
Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase;
PDBTitle: human tissue transglutaminase in gdp bound form
12c1g0dA_



99.1 22
PDB header:transferase
Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase;
PDBTitle: crystal structure of red sea bream transglutaminase
13c1f13A_



99.1 28
PDB header:coagulation factor
Chain: A: PDB Molecule:cellular coagulation factor xiii zymogen;
PDBTitle: recombinant human cellular coagulation factor xiii
14c1l9mB_



99.1 25
PDB header:transferase
Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3;
PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation
15c4u65F_



99.0 16
PDB header:transferase/hydrolase
Chain: F: PDB Molecule:putative cystine protease;
PDBTitle: structure of the periplasmic output domain of the legionella2 pneumophila lapd ortholog cdgs9 in complex with pseudomonas3 fluorescens lapg
16c2qshA_



98.9 12
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:dna repair protein rad4;
PDBTitle: crystal structure of rad4-rad23 bound to a mismatch dna
17c3eswA_



98.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:peptide-n(4)-(n-acetyl-beta-glucosaminyl)asparagine
PDBTitle: complex of yeast pngase with glcnac2-iac.
18c2pfrB_



98.0 11
PDB header:transferase
Chain: B: PDB Molecule:arylamine n-acetyltransferase 2;
PDBTitle: human n-acetyltransferase 2
19c4fgpB_



98.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:periplasmic protein;
PDBTitle: legionella pneumophila lapg (egta-treated)
20d1e2ta_



97.9 12
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Arylamine N-acetyltransferase
21d1w4ta1



not modelled 97.8 12
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Arylamine N-acetyltransferase
22c3lnbA_



not modelled 97.8 11
PDB header:transferase
Chain: A: PDB Molecule:n-acetyltransferase family protein;
PDBTitle: crystal structure analysis of arylamine n-acetyltransferase c from2 bacillus anthracis
23c4guzA_



not modelled 97.7 12
PDB header:transferase
Chain: A: PDB Molecule:probable arylamine n-acetyl transferase;
PDBTitle: structure of the arylamine n-acetyltransferase from mycobacterium2 abscessus
24d2bsza1



not modelled 97.6 10
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Arylamine N-acetyltransferase
25c4dmoB_



not modelled 97.6 9
PDB header:transferase
Chain: B: PDB Molecule:n-hydroxyarylamine o-acetyltransferase;
PDBTitle: crystal structure of the (baccr)nat3 arylamine n-acetyltransferase2 from bacillus cereus reveals a unique cys-his-glu catalytic triad
26c2vfbA_



not modelled 97.3 9
PDB header:transferase
Chain: A: PDB Molecule:arylamine n-acetyltransferase;
PDBTitle: the structure of mycobacterium marinum arylamine n-2 acetyltransferase
27d1w5ra1



not modelled 97.3 9
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Arylamine N-acetyltransferase
28c3d9wA_



not modelled 97.2 13
PDB header:transferase
Chain: A: PDB Molecule:putative acetyltransferase;
PDBTitle: crystal structure analysis of nocardia farcinica arylamine n-2 acetyltransferase
29d1yuaa2



not modelled 57.1 18
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Prokaryotic DNA topoisomerase I, a C-terminal fragment
30c1ezaA_



not modelled 48.5 17
PDB header:phosphotransferase
Chain: A: PDB Molecule:enzyme i;
PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure
31c5woyA_



not modelled 47.3 14
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: nmr solution structure of enzyme i (neit) protein using two 4d-spectra
32c1yuaA_



not modelled 44.6 17
PDB header:dna binding protein
Chain: A: PDB Molecule:topoisomerase i;
PDBTitle: c-terminal domain of escherichia coli topoisomerase i
33c6h8mB_



not modelled 41.7 21
PDB header:hydrolase
Chain: B: PDB Molecule:neurotrypsin;
PDBTitle: crystal structure of the third srcr domain of murine neurotrypsin.
34c2jopA_



not modelled 40.0 21
PDB header:immune system
Chain: A: PDB Molecule:t-cell surface glycoprotein cd5;
PDBTitle: solution structure of the n-terminal extracellular domain2 of the lymphocyte receptor cd5 (cd5 domain 1)
35d1kbla2



not modelled 36.6 18
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Phosphohistidine domain
Family:Pyruvate phosphate dikinase, central domain
36c4rulA_



not modelled 33.9 25
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase 1;
PDBTitle: crystal structure of full-length e.coli topoisomerase i in complex2 with ssdna
37d1h6za2



not modelled 33.6 14
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Phosphohistidine domain
Family:Pyruvate phosphate dikinase, central domain
38c3nrlB_



not modelled 33.1 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein rumgna_01417;
PDBTitle: crystal structure of protein rumgna_01417 from ruminococcus gnavus,2 northeast structural genomics consortium target ugr76
39c2ottY_



not modelled 30.8 15
PDB header:immune system
Chain: Y: PDB Molecule:t-cell surface glycoprotein cd5;
PDBTitle: crystal structure of cd5_diii
40c3chgB_



not modelled 29.8 8
PDB header:ligand binding protein
Chain: B: PDB Molecule:glycine betaine-binding protein;
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
41d1ou8a_



not modelled 26.5 14
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
42c1vbhA_



not modelled 25.6 13
PDB header:transferase
Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase;
PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize
43c3jsyA_



not modelled 25.2 32
PDB header:ribosomal protein
Chain: A: PDB Molecule:acidic ribosomal protein p0 homolog;
PDBTitle: n-terminal fragment of ribosomal protein l10 from methanococcus2 jannaschii
44d1zszc1



not modelled 24.4 14
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
45d1ou9a_



not modelled 23.4 14
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
46c6cgqA_



not modelled 22.3 13
PDB header:lyase
Chain: A: PDB Molecule:threonine synthase;
PDBTitle: threonine synthase from bacillus subtilis atcc 6633 with plp and plp-2 ala
47c2a5wC_



not modelled 22.1 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:sulfite reductase, desulfoviridin-type subunit gamma
PDBTitle: crystal structure of the oxidized gamma-subunit of the dissimilatory2 sulfite reductase (dsrc) from archaeoglobus fulgidus
48c3j21k_



not modelled 22.1 18
PDB header:ribosome
Chain: K: PDB Molecule:50s ribosomal protein l14e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
49d1j0aa_



not modelled 22.0 17
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
50c3a56B_



not modelled 20.9 12
PDB header:hydrolase
Chain: B: PDB Molecule:protein-glutaminase;
PDBTitle: crystal structure of pro- protein-glutaminase
51c4nwbA_



not modelled 20.9 17
PDB header:unknown function
Chain: A: PDB Molecule:mrna turnover protein 4;
PDBTitle: crystal structure of mrt4
52c5t1oB_



not modelled 20.5 27
PDB header:transferase
Chain: B: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase ptsp;
PDBTitle: solution-state nmr and saxs structural ensemble of npr (1-85) in2 complex with ein-ntr (170-424)
53d1zyma2



not modelled 20.3 25
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Phosphohistidine domain
Family:N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
54d1yfna1



not modelled 19.6 14
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
55d1p5ja_



not modelled 19.6 25
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
56c1p5jA_



not modelled 19.6 25
PDB header:lyase
Chain: A: PDB Molecule:l-serine dehydratase;
PDBTitle: crystal structure analysis of human serine dehydratase
57c2hwgA_



not modelled 19.5 20
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of phosphorylated enzyme i of the phosphoenolpyruvate:sugar2 phosphotransferase system
58c1yx3A_



not modelled 19.3 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein dsrc;
PDBTitle: nmr structure of allochromatium vinosum dsrc: northeast2 structural genomics consortium target op4
59c1kblA_



not modelled 18.5 17
PDB header:transferase
Chain: A: PDB Molecule:pyruvate phosphate dikinase;
PDBTitle: pyruvate phosphate dikinase
60c3izcs_



not modelled 17.9 53
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
61c2rkbE_



not modelled 17.4 25
PDB header:lyase
Chain: E: PDB Molecule:serine dehydratase-like;
PDBTitle: serine dehydratase like-1 from human cancer cells
62d3be7a1



not modelled 15.9 11
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Zn-dependent arginine carboxypeptidase-like
63c3iz5s_



not modelled 15.9 18
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a (l18ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
64c6ei1A_



not modelled 15.6 21
PDB header:hydrolase
Chain: A: PDB Molecule:zinc finger with ufm1-specific peptidase domain protein;
PDBTitle: crystal structure of the covalent complex between deubiquitinase zufsp2 (zup1) and ubiquitin-pa
65c2hroA_



not modelled 15.4 23
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of the full-lenght enzyme i of the pts system from2 staphylococcus carnosus
66d1vbga2



not modelled 15.3 17
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Phosphohistidine domain
Family:Pyruvate phosphate dikinase, central domain
67c5xa2B_



not modelled 15.2 13
PDB header:transferase
Chain: B: PDB Molecule:cysteine synthase;
PDBTitle: crystal structure of o-acetylserine sulfhydrylase from planctomyces2 limnophila
68d1wkva1



not modelled 14.9 25
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
69c3qp1A_



not modelled 14.6 13
PDB header:transcription
Chain: A: PDB Molecule:cvir transcriptional regulator;
PDBTitle: crystal structure of cvir ligand-binding domain bound to the native2 ligand c6-hsl
70c5xenB_



not modelled 14.3 12
PDB header:transferase
Chain: B: PDB Molecule:cysteine synthase;
PDBTitle: crystal structure of a hydrogen sulfide-producing enzyme (fn1220) from2 fusobacterium nucleatum in complex with l-serine-plp schiff base
71c3j3bq_



not modelled 13.8 26
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18;
PDBTitle: structure of the human 60s ribosomal proteins
72c5b3kA_



not modelled 13.8 24
PDB header:electron transport
Chain: A: PDB Molecule:uncharacterized protein pa3435;
PDBTitle: c101a mutant of flavodoxin from pseudomonas aeruginosa
73c5ybwA_



not modelled 13.7 12
PDB header:isomerase
Chain: A: PDB Molecule:aspartate racemase;
PDBTitle: crystal structure of pyridoxal 5'-phosphate-dependent aspartate2 racemase
74c4d8tC_



not modelled 13.7 12
PDB header:lyase
Chain: C: PDB Molecule:d-cysteine desulfhydrase;
PDBTitle: crystal structure of d-cysteine desulfhydrase from salmonella2 typhimurium at 2.2 a resolution
75d1jvaa3



not modelled 13.6 19
Fold:Homing endonuclease-like
Superfamily:Homing endonucleases
Family:Intein endonuclease
76c4hubG_



not modelled 13.4 37
PDB header:ribosome
Chain: G: PDB Molecule:50s ribosomal protein l10e;
PDBTitle: the re-refined crystal structure of the haloarcula marismortui large2 ribosomal subunit at 2.4 angstrom resolution: more complete structure3 of the l7/l12 and l1 stalk, l5 and lx proteins
77c2gn0A_



not modelled 13.1 9
PDB header:lyase
Chain: A: PDB Molecule:threonine dehydratase catabolic;
PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation)
78c2j0wA_



not modelled 12.6 28
PDB header:transferase
Chain: A: PDB Molecule:lysine-sensitive aspartokinase 3;
PDBTitle: crystal structure of e. coli aspartokinase iii in complex2 with aspartate and adp (r-state)
79c2f4qA_



not modelled 12.5 32
PDB header:isomerase
Chain: A: PDB Molecule:type i topoisomerase, putative;
PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib
80c2d1fA_



not modelled 11.9 20
PDB header:lyase
Chain: A: PDB Molecule:threonine synthase;
PDBTitle: structure of mycobacterium tuberculosis threonine synthase
81d1fcja_



not modelled 11.9 8
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
82c2m3dA_



not modelled 11.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:nucleolar rna helicase 2;
PDBTitle: nmr structure of the guct domain from human dead box polypeptide 21
83c4airB_



not modelled 11.7 17
PDB header:transferase
Chain: B: PDB Molecule:cysteine synthase;
PDBTitle: leishmania major cysteine synthase
84d1tyza_



not modelled 11.6 8
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
85c2ct6A_



not modelled 11.5 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sh3 domain-binding glutamic acid-rich-like
PDBTitle: solution structure of the sh3 domain-binding glutamic acid-2 rich-like protein 2
86c2zsjB_



not modelled 11.3 24
PDB header:lyase
Chain: B: PDB Molecule:threonine synthase;
PDBTitle: crystal structure of threonine synthase from aquifex aeolicus vf5
87d2e29a1



not modelled 11.3 15
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:GUCT domain
88d1f2da_



not modelled 11.1 13
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
89c5cvcB_



not modelled 11.1 21
PDB header:isomerase
Chain: B: PDB Molecule:serine racemase;
PDBTitle: structure of maize serine racemase
90c4aecB_



not modelled 11.0 4
PDB header:lyase
Chain: B: PDB Molecule:cysteine synthase, mitochondrial;
PDBTitle: crystal structure of the arabidopsis thaliana o-acetyl-serine-(thiol)-2 lyase c
91c5c3uA_



not modelled 9.8 20
PDB header:lyase
Chain: A: PDB Molecule:l-serine ammonia-lyase;
PDBTitle: crystal structure of a fungal l-serine ammonia-lyase from rhizomucor2 miehei
92d1tdja1



not modelled 9.8 25
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
93c4ql4A_



not modelled 9.7 0
PDB header:lyase
Chain: A: PDB Molecule:o-acetylserine lyase;
PDBTitle: crystal structure of o-acetylserine sulfhydrylase from bacillus2 anthracis
94d1by2a_



not modelled 9.6 14
Fold:SRCR-like
Superfamily:SRCR-like
Family:Scavenger receptor cysteine-rich (SRCR) domain
95c4xvzB_



not modelled 9.5 22
PDB header:transferase
Chain: B: PDB Molecule:mycinamicin iii 3''-o-methyltransferase;
PDBTitle: mycf mycinamicin iii 3'-o-methyltransferase in complex with mg
96c5fbtA_



not modelled 9.5 18
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:phosphoenolpyruvate synthase;
PDBTitle: crystal structure of rifampin phosphotransferase rph-lm from listeria2 monocytogenes in complex with rifampin
97c1x1qA_



not modelled 9.5 8
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase beta chain;
PDBTitle: crystal structure of tryptophan synthase beta chain from thermus2 thermophilus hb8
98d1h59b_



not modelled 9.3 19
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Growth factor receptor domain
Family:Growth factor receptor domain
99c5ancC_



not modelled 9.3 12
PDB header:translation
Chain: C: PDB Molecule:60s acidic ribosomal protein p0;
PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal subunit

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