Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0793_(-)_886722_887027
DateFri Jul 26 01:50:37 BST 2019
Unique Job ID20a4ee1a1d1b6f52
SequenceMTSPVAVIAR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.828 Y:38.108 Z:32.145
Model (left) based on template d1y0ha_
Top template information
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
Confidence and coverage
Confidence:100.0% Coverage: 99%
100 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1y0ha_



100.0 100
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
2c4zosA_



99.9 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein ye0340 from yersinia enterocolitica subsp.
PDBTitle: 2.20 angstrom resolution crystal structure of protein ye0340 of2 unidentified function from yersinia enterocolitica subsp.3 enterocolitica 8081]
3c3bm7A_



99.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein of unknown function with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution
4d2pd1a1



99.9 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
5c2omoC_



99.9 21
PDB header:oxidoreductase
Chain: C: PDB Molecule:duf176;
PDBTitle: putative antibiotic biosynthesis monooxygenase from nitrosomonas2 europaea
6c2bbeA_



99.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein so0527;
PDBTitle: crystal structure of protein so0527 from shewanella oneidensis
7d2omoa1



99.9 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
8d1x7va_



99.9 32
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
9c3e8oB_



99.9 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (dr_2100) from deinococcus radiodurans at 1.40 a resolution
10c3fgvB_



99.9 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (spo2313) from silicibacter pomeroyi dss-3 at 1.30 a resolution
11c2gffB_



99.9 22
PDB header:sugar binding protein
Chain: B: PDB Molecule:lsrg protein;
PDBTitle: crystal structure of yersinia pestis lsrg
12c3mcsB_



99.9 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (fn1347) from2 fusobacterium nucleatum subsp. nucleatum atcc 25586 at 2.55 a3 resolution
13c4dn9B_



99.9 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 from chloroflexus aurantiacus j-10-fl
14c4dpoA_



99.9 22
PDB header:unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: crystal structure of a conserved protein mm_1583 from methanosarcina2 mazei go1
15d1tuva_



99.9 26
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
16c2fb0A_



99.9 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of conserved protein of unknown function from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution, possible3 oxidoreductase
17c3gz7B_



99.9 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_888398.1) from bordetella bronchiseptica at 2.15 a resolution
18c4hl9B_



99.9 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of antibiotic biosynthesis monooxygenase
19c3kkfA_



99.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_810307.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.30 a3 resolution
20c3f44A_



99.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (yp_193413.1) from2 lactobacillus acidophilus ncfm at 1.55 a resolution
21c3kngA_



not modelled 99.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:snoab;
PDBTitle: crystal structure of snoab, a cofactor-independent oxygenase2 from streptomyces nogalater, determined to 1.9 resolution
22c3hx9B_



not modelled 99.8 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein rv3592;
PDBTitle: structure of heme-degrader, mhud (rv3592), from2 mycobacterium tuberculosis with two hemes bound in its3 active site
23d1iuja_



not modelled 99.8 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
24d1q8ba_



not modelled 99.7 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YjcS
25c6fxdB_



not modelled 99.6 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:mupz;
PDBTitle: crystal structure of mupz from pseudomonas fluorescens
26c5f9pA_



not modelled 99.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:anthrone oxidase-like protein;
PDBTitle: crystal structure study of anthrone oxidase-like protein
27c2rilA_



not modelled 99.4 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of a putative monooxygenase (yp_001095275.1) from2 shewanella loihica pv-4 at 1.26 a resolution
28d2zdpa1



not modelled 99.4 7
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
29c3fj2A_



not modelled 99.4 11
PDB header:unknown function
Chain: A: PDB Molecule:monooxygenase-like protein;
PDBTitle: crystal structure of a monooxygenase-like protein (lin2316) from2 listeria innocua at 1.85 a resolution
30c3tvzA_



not modelled 99.4 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein yhgc;
PDBTitle: structure of bacillus subtilis hmob
31c4ae5C_



not modelled 99.3 16
PDB header:signaling protein
Chain: C: PDB Molecule:signal transduction protein trap;
PDBTitle: structure of a major regulator of staphylococcal pathogenesis
32d1lq9a_



not modelled 99.3 19
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Actinorhodin biosynthesis monooxygenase ActVa-Orf6
33d1xbwa_



not modelled 99.2 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
34d1tz0a_



not modelled 99.2 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
35c5y02D_



not modelled 97.9 9
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
36c3bn7A_



not modelled 97.9 16
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (cc_2267) from2 caulobacter crescentus cb15 at 1.64 a resolution
37d1q4ra_



not modelled 97.9 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
38c3bdeA_



not modelled 97.9 7
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
39d1tr0a_



not modelled 97.8 10
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
40c2qycA_



not modelled 97.8 16
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
41c3bguA_



not modelled 97.7 13
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein of unknown function;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution
42d1rjja_



not modelled 97.5 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
43c3bb5B_



not modelled 97.5 11
PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
44c3hfkB_



not modelled 97.4 10
PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in2 complex with 4-methylmuconolactone
45c5ixuA_



not modelled 97.4 9
PDB header:structural genomics/unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap domain protein from2 burkholderia xenovorans
46c3fmbA_



not modelled 97.3 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
47d2cb2a1



not modelled 97.3 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:SOR-like
48d1x8da1



not modelled 97.1 9
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YiiL-like
49c2qlwA_



not modelled 96.9 9
PDB header:isomerase
Chain: A: PDB Molecule:rhau;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum
50c2qlxA_



not modelled 96.9 9
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose
51c5b0aA_



not modelled 96.6 5
PDB header:lyase
Chain: A: PDB Molecule:olivetolic acid cyclase;
PDBTitle: polyketide cyclase oac from cannabis sativa, h5q mutant
52d1vqya1



not modelled 96.5 10
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
53d2ftra1



not modelled 96.5 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:EthD-like
54c5k9fA_



not modelled 96.4 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:nipsnap domain protein;
PDBTitle: crystal structure of a nipsnap domain protein from burkholderia2 xenovorans
55d1vqsa_



not modelled 96.3 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
56d2hiqa1



not modelled 96.1 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YdhR
57c1wd6B_



not modelled 95.7 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ydhr;
PDBTitle: crystal structure of jw1657 from escherichia coli
58d2go8a1



not modelled 95.7 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
59c2jdjB_



not modelled 95.2 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:redy-like protein;
PDBTitle: crystal structure of hapk from hahella chejuensis
60c5kakE_



not modelled 95.1 16
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap-like domain protein2 from burkholderia xenovorans
61c6hhnA_



not modelled 94.9 8
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of l-rhamnose mutarotase fa22100 from formosa2 agariphila
62c3dcaC_



not modelled 94.5 18
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:rpa0582;
PDBTitle: crystal structure of the rpa0582- protein of unknown2 function from rhodopseudomonas palustris- a structural3 genomics target
63d2fiua1



not modelled 94.4 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Atu0297-like
64c3lo3E_



not modelled 94.2 10
PDB header:structure genomics, unknown function
Chain: E: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 colwellia psychrerythraea 34h.
65c3bf4B_



not modelled 89.4 14
PDB header:unknown function
Chain: B: PDB Molecule:ethyl tert-butyl ether degradation ethd protein;
PDBTitle: crystal structure of an ethd-like protein (reut_b5694) from ralstonia2 eutropha jmp134 at 2.10 a resolution
66c3gn6B_



not modelled 79.2 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ct0912, orfan protein with a ferredoxin-like domain repeat;
PDBTitle: crystal structure of ct0912, orfan protein from chlorobium tepidum2 with a ferredoxin-like domain repeat (np_661805.1) from chlorobium3 tepidum tls at 1.80 a resolution
67c3a16C_



not modelled 75.3 16
PDB header:lyase
Chain: C: PDB Molecule:aldoxime dehydratase;
PDBTitle: crystal structure of aldoxime dehydratase (oxdre) in complex2 with propionaldoxime
68d2ifxa1



not modelled 66.6 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:MmlI-like
69c2kl8A_



not modelled 45.6 30
PDB header:de novo protein
Chain: A: PDB Molecule:or15;
PDBTitle: solution nmr structure of de novo designed ferredoxin-like fold2 protein, northeast structural genomics consortium target or15
70c5cw9A_



not modelled 43.5 33
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed ferredoxin-ferredoxin domain insertion
PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
71d2cfxa2



not modelled 29.1 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
72c4hhuA_



not modelled 24.2 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:or280;
PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or280.
73c4ky3A_



not modelled 22.3 26
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein or327;
PDBTitle: three-dimensional structure of the orthorhombic crystal of2 computationally designed insertion domain , northeast structural3 genomics consortium (nesg) target or327
74d2cs4a1



not modelled 17.1 31
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
75c2e1aD_



not modelled 16.4 14
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
76c1zr9A_



not modelled 11.4 15
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
77d1zr9a1



not modelled 11.4 15
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
78c3znuI_



not modelled 10.2 16
PDB header:lyase
Chain: I: PDB Molecule:5-chloromuconolactone dehalogenase;
PDBTitle: crystal structure of clcf in crystal form 2
79c5yh1A_



not modelled 9.3 8
PDB header:ribosomal protein
Chain: A: PDB Molecule:member of s1p family of ribosomal proteins;
PDBTitle: member of s1p family of ribosomal proteins pf0399 dhh domain
80c4iyqB_



not modelled 9.2 15
PDB header:protein binding
Chain: B: PDB Molecule:divalent ion tolerance protein cuta1;
PDBTitle: crystal structure of divalent ion tolerance protein cuta1 from2 ehrlichia chaffeensis
81d1wi0a_



not modelled 7.9 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
82d2atza1



not modelled 7.7 18
Fold:Prim-pol domain
Superfamily:Prim-pol domain
Family:HP0184-like
83d2pc6a1



not modelled 7.3 4
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
84c4lqbA_



not modelled 7.2 7
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein kfla3161
85c2djwF_



not modelled 6.9 19
PDB header:unknown function
Chain: F: PDB Molecule:probable transcriptional regulator, asnc family;
PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8
86c4ic7B_



not modelled 6.8 17
PDB header:transferase
Chain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 5;
PDBTitle: crystal structure of the erk5 kinase domain in complex with an mkk52 binding fragment
87d2cyya2



not modelled 6.7 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
88d2f1fa2



not modelled 6.5 9
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
89d2r85a2



not modelled 6.4 16
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
90d2fgca1



not modelled 5.5 17
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
91c3bpjD_



not modelled 5.5 8
PDB header:translation
Chain: D: PDB Molecule:eukaryotic translation initiation factor 3 subunit j;
PDBTitle: crystal structure of human translation initiation factor 3, subunit 12 alpha
92d2npta1



not modelled 5.3 20
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain

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