Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0799c_(-)_892269_893276
DateFri Jul 26 01:50:38 BST 2019
Unique Job IDfeb146ae32208037
SequenceVAVPAVSPQP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.548 Y:53.399 Z:50.535
Model (left) based on template d2iiza1
Top template information
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Dyp-type peroxidase-like
Confidence and coverage
Confidence:100.0% Coverage: 91%
304 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2iiza1



100.0 35
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Dyp-type peroxidase-like
2c3qnsA_



100.0 59
PDB header:oxidoreductase
Chain: A: PDB Molecule:dyp peroxidase;
PDBTitle: dypb from rhodococcus jostii rha1, crystal form 2
3c4gu7C_



100.0 60
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative uncharacterized protein sco7193;
PDBTitle: crystal structure of dyp-type peroxidase (sco7193) from streptomyces2 coelicolor
4d2gvka1



100.0 46
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Dyp-type peroxidase-like
5c5gt2A_



100.0 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable deferrochelatase/peroxidase yfex;
PDBTitle: crystal structure and biochemical features of dye-decolorizing2 peroxidase yfex from escherichia coli o157
6c5de0D_



100.0 38
PDB header:oxidoreductase
Chain: D: PDB Molecule:deferrochelatase;
PDBTitle: dye-decolorizing protein from v. cholerae
7c4gs1A_



100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:dyp-type peroxidase;
PDBTitle: crystal structure of dyp-type peroxidase from thermobifida2 cellulosilytica
8c4gt2A_



100.0 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein sco3963;
PDBTitle: crystal structure of dyp-type peroxidase (sco3963) from streptomyces2 coelicolor
9c6qzoG_



100.0 19
PDB header:oxidoreductase
Chain: G: PDB Molecule:peroxidase;
PDBTitle: crystal structure of dyp-type peroxidase from cellulomonas bogoriensis
10c5jxuA_



100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:dyp-type peroxidase family;
PDBTitle: structural basis for the catalytic activity of thermomonospora curvata2 heme-containing dyp-type peroxidase.
11c4grcA_



100.0 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: crystal structure of dyp-type peroxidase (sco2276) from streptomyces2 coelicolor
12c2wx6B_



100.0 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:peroxidase ycdb;
PDBTitle: x-ray crystallographic structure of e. coli apo-efeb
13c4au9A_



100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:dyp-type peroxidase i;
PDBTitle: crystal structure of a fungal dyp-type peroxidase from2 auricularia auricula-judae
14d2d3qa1



100.0 23
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Dyp-type peroxidase-like
15c5c2iC_



100.0 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:alr1585 protein;
PDBTitle: crystal structure of anabaena sp. dyp-type peroxidese (anapx)
16c4g2cB_



100.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:dyp2;
PDBTitle: dyp2 from amycolatopsis sp. atcc 39116
17c6fskA_



100.0 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:dyp-type peroxidase;
PDBTitle: f194y mutant of the dye-decolorizing peroxidase (dyp) from pleurotus2 ostreatus
18c3nn4C_



83.5 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:chlorite dismutase;
PDBTitle: structure of chlorite dismutase from candidatus nitrospira defluvii2 r173k mutant
19c4pfbA_



58.5 16
PDB header:transport protein
Chain: A: PDB Molecule:c4-dicarboxylate-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 fusobacterium nucleatun (fn1258, target efi-510120) with bound sn-3 glycerol-3-phosphate
20c4petA_



56.9 9
PDB header:solute-binding protein
Chain: A: PDB Molecule:extracellular solute-binding protein, family 7;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 colwellia psychrerythraea (cps_0129, target efi-510097) with bound3 calcium and pyruvate
21c5a13J_



not modelled 55.1 15
PDB header:oxidoreductase
Chain: J: PDB Molecule:chlorite dismutase;
PDBTitle: crystal structure of chlorite dismutase from2 magnetospirillum sp. in complex with thiocyanate
22c3dtzB_



not modelled 54.8 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative chlorite dismutase ta0507;
PDBTitle: crystal structure of putative chlorite dismutase ta0507
23c5im2A_



not modelled 52.3 17
PDB header:transport protein
Chain: A: PDB Molecule:twin-arginine translocation pathway signal;
PDBTitle: crystal structure of a trap solute binding protein from rhodoferax2 ferrireducens t118 (rfer_2570, target efi-510210) in complex with3 copurified benzoate
24c4mcoC_



not modelled 50.7 19
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodoferax ferrireducens (rfer_1840), target efi-510211, with bound3 malonate
25c1u2zC_



not modelled 50.1 12
PDB header:transferase
Chain: C: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-79
PDBTitle: crystal structure of histone k79 methyltransferase dot1p2 from yeast
26c4pbhA_



not modelled 48.7 15
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit, putative;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ruegeria pomeroyi dss-3 (spo1773, target efi-510260) with bound3 benzoic acid
27c4n6kA_



not modelled 47.3 14
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens dsm2638, target efi-510113 (desal_0342),3 complex with diglycerolphosphate
28c3u65B_



not modelled 47.3 11
PDB header:transport protein
Chain: B: PDB Molecule:tp33 protein;
PDBTitle: the crystal structure of tat-p(t) (tp0957)
29c4o8mA_



not modelled 47.3 21
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein2 actinobacillus succinogenes 130z, target efi-510004, with bound l-3 galactonate
30c2vxhF_



not modelled 46.3 20
PDB header:oxidoreductase
Chain: F: PDB Molecule:chlorite dismutase;
PDBTitle: the crystal structure of chlorite dismutase: a detox enzyme2 producing molecular oxygen
31c4mncA_



not modelled 46.3 17
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp. js666 (bpro_4736), target efi-510156, with bound3 benzoyl formate, space group p21
32c2hpgB_



not modelled 45.0 13
PDB header:ligand binding protein
Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding
PDBTitle: the crystal structure of a thermophilic trap periplasmic2 binding protein
33c4n6dA_



not modelled 44.0 19
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens dsm2638 (desal_3247), target efi-510112,3 phased with i3c, open complex, c-terminus of symmetry mate bound in4 ligand binding site
34c4pf6A_



not modelled 43.6 31
PDB header:transport protein
Chain: A: PDB Molecule:c4-dicarboxylate-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 roseobacter denitrificans (rd1_0742, target efi-510239) with bound 3-3 deoxy-d-manno-oct-2-ulosonic acid (kdo)
35c4wwsE_



not modelled 43.6 18
PDB header:oxidoreductase
Chain: E: PDB Molecule:putative heme-dependent peroxidase lmo2113;
PDBTitle: structure of chlorite dismutase-like protein from listeria2 monocytogenes
36c4xeqC_



not modelled 43.0 16
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio vulgaris (deval_0042, target efi-510114) bound to3 copurified (r)-pantoic acid
37c4p56C_



not modelled 42.2 22
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative extracellular solute-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bordetella bronchiseptica, target efi-510038 (bb2442), with bound3 (r)-mandelate and (s)-mandelate
38c4pbqC_



not modelled 40.9 11
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 haemophilus influenzae rdaw (hicg_00826, target efi-510123) with3 bound l-gulonate
39d1t0tv_



not modelled 40.8 24
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Chlorite dismutase-like
40d1u2za_



not modelled 37.9 12
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Catalytic, N-terminal domain of histone methyltransferase Dot1l
41c4mnpA_



not modelled 37.4 21
PDB header:sugar binding protein
Chain: A: PDB Molecule:n-acetylneuraminate-binding protein;
PDBTitle: structure of the sialic acid binding protein from fusobacterium2 nucleatum subsp. nucleatum atcc 25586
42c2pfyA_



not modelled 37.3 14
PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid
43c4nguA_



not modelled 37.1 15
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio alaskensis g20 (dde_1548), target efi-510103, with3 bound d-ala-d-ala
44c4n4uA_



not modelled 37.0 17
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter periplasmic solute-binding
PDBTitle: crystal structure of abc transporter solute binding protein bb07192 from bordetella bronchiseptica rb50, target efi-510049
45c4pe3A_



not modelled 35.6 10
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_3620, target efi-510199), apo open3 structure
46c5i7iB_



not modelled 34.9 26
PDB header:transport protein
Chain: B: PDB Molecule:trap solute binding protein;
PDBTitle: crystal structure of a marine metagenome trap solute binding protein2 specific for aromatic acid ligands (sorcerer ii global ocean sampling3 expedition, unidentified microbe, locus tag gos_1523157) in complex4 with co-crystallized 3-hydroxybenzoate
47c4y66C_



not modelled 30.9 12
PDB header:cell cycle
Chain: C: PDB Molecule:mnd1;
PDBTitle: crystal structure of giardia lamblia hop2-mnd1 complex
48c4ovrA_



not modelled 29.3 18
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 xanthobacter autotrophicus py2, target efi-510329, with bound beta-d-3 galacturonate
49c4pfiA_



not modelled 28.3 15
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 marinobacter aquaeolei vt8 (maqu_2829, target efi-510133), apo open3 structure
50c4nhbB_



not modelled 27.4 15
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio desulfuricans (ddes_1525), target efi-510107, with3 bound sn-glycerol-3-phosphate
51d1s6na_



not modelled 27.4 34
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
52d1vjja1



not modelled 25.7 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Transglutaminase N-terminal domain
53d1g0da1



not modelled 24.5 41
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Transglutaminase N-terminal domain
54c2h0pA_



not modelled 22.6 17
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein;
PDBTitle: nmr structure of the dengue-4 virus envelope protein domain2 iii
55d1ok8a1



not modelled 21.3 20
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
56d1ex0a1



not modelled 21.2 27
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Transglutaminase N-terminal domain
57d2q3za1



not modelled 21.1 32
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Transglutaminase N-terminal domain
58c3egpA_



not modelled 20.0 26
PDB header:viral protein
Chain: A: PDB Molecule:envelope protein;
PDBTitle: crystal structure analysis of dengue-1 envelope protein2 domain iii
59d1pjwa_



not modelled 19.1 26
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
60d2cg4a2



not modelled 18.7 8
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
61d2piea1



not modelled 18.4 23
Fold:SMAD/FHA domain
Superfamily:SMAD/FHA domain
Family:FHA domain
62c1uzgA_



not modelled 17.7 17
PDB header:viral protein
Chain: A: PDB Molecule:major envelope protein e;
PDBTitle: crystal structure of the dengue type 3 virus envelope2 protein
63d1vdha_



not modelled 17.5 18
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Chlorite dismutase-like
64d1z66a1



not modelled 16.1 21
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
65c4yicA_



not modelled 16.1 21
PDB header:transport protein
Chain: A: PDB Molecule:trap transporter solute binding protein;
PDBTitle: crystal structure of a trap transporter solute binding protein2 (ipr025997) from bordetella bronchiseptica rb50 (bb0280, target efi-3 500035) with bound picolinic acid
66d1svba1



not modelled 15.8 21
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
67c2jqmA_



not modelled 14.8 25
PDB header:transferase
Chain: A: PDB Molecule:envelope protein e;
PDBTitle: yellow fever envelope protein domain iii nmr structure2 (s288-k398)
68c4napD_



not modelled 14.8 26
PDB header:transport protein
Chain: D: PDB Molecule:extracellular solute-binding protein, family 7;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio alaskensis g20 (dde_0634), target efi-510102, with3 bound d-tryptophan
69c4p1eA_



not modelled 14.7 16
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 escherichia fergusonii (efer_1530), target efi-510119, apo open3 structure, phased with iodide
70c4xfeA_



not modelled 14.3 26
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter subunit dctp;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 pseudomonas putida f1 (pput_1203), target efi-500184, with bound d-3 glucuronate
71c5fn1A_



not modelled 13.6 19
PDB header:virus
Chain: A: PDB Molecule:coat protein;
PDBTitle: electron cryo-microscopy of filamentous flexible virus pepmv (pepino2 mosaic virus)
72c4p8bA_



not modelled 13.3 32
PDB header:transport protein
Chain: A: PDB Molecule:trap-type transporter, periplasmic component;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ralstonia eutropha h16 (h16_a1328), target efi-510189, with bound3 (s)-2-hydroxy-2-methyl-3-oxobutanoate ((s)-2-acetolactate)
73c4n8gC_



not modelled 12.9 11
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 chromohalobacter salexigens dsm 3043 (csal_0660), target efi-501075,3 with bound d-alanine-d-alanine
74c4pf8A_



not modelled 12.9 21
PDB header:transport protein
Chain: A: PDB Molecule:trap-t family transporter, dctp (periplasmic binding)
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 sulfitobacter sp. nas-14.1 (target efi-510299) with bound beta-d-3 galacturonate
75c4o94B_



not modelled 12.8 26
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodopseudomonas palustris haa2 (rpb_3329), target efi-510223, with3 bound succinate
76c2qdrA_



not modelled 12.7 13
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative dioxygenase (npun_f5605) from nostoc2 punctiforme pcc 73102 at 2.60 a resolution
77d1o6ea_



not modelled 12.4 8
Fold:Herpes virus serine proteinase, assemblin
Superfamily:Herpes virus serine proteinase, assemblin
Family:Herpes virus serine proteinase, assemblin
78c4doxA_



not modelled 12.3 26
PDB header:viral protein
Chain: A: PDB Molecule:coat protein;
PDBTitle: crystal structure of papaya mosaic virus capsid protein
79c2vpnB_



not modelled 12.2 26
PDB header:transport
Chain: B: PDB Molecule:periplasmic substrate binding protein;
PDBTitle: high-resolution structure of the periplasmic ectoine-2 binding protein from teaabc trap-transporter of halomonas3 elongata
80d1soua_



not modelled 11.9 16
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:Methenyltetrahydrofolate synthetase
81c4n91A_



not modelled 11.7 11
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 anaerococcus prevotii dsm 20548 (apre_1383), target efi-510023, with3 bound alpha/beta d-glucuronate
82c4x8rB_



not modelled 11.6 21
PDB header:solute-binding protein
Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_2138, target efi-510205) with3 bound glucuronate
83c2zzxD_



not modelled 11.6 32
PDB header:transport protein
Chain: D: PDB Molecule:abc transporter, solute-binding protein;
PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate
84c3gyyC_



not modelled 11.4 22
PDB header:transport protein
Chain: C: PDB Molecule:periplasmic substrate binding protein;
PDBTitle: the ectoine binding protein of the teaabc trap transporter teaa in the2 apo-state
85c2hzkB_



not modelled 11.1 21
PDB header:ligand binding, transport protein
Chain: B: PDB Molecule:trap-t family sorbitol/mannitol transporter, periplasmic
PDBTitle: crystal structures of a sodium-alpha-keto acid binding subunit from a2 trap transporter in its open form
86c4pddA_



not modelled 10.7 11
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp js666 (bpro_0088, target efi-510167) bound to d-3 erythronate
87c3fxbB_



not modelled 10.6 21
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of the ectoine-binding protein ueha
88c4nn3A_



not modelled 10.6 25
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens (desal_2161), target efi-510109, with bound3 orotic acid
89c3uajA_



not modelled 10.5 21
PDB header:viral protein/immune system
Chain: A: PDB Molecule:envelope protein;
PDBTitle: crystal structure of the envelope glycoprotein ectodomain from dengue2 virus serotype 4 in complex with the fab fragment of the chimpanzee3 monoclonal antibody 5h2
90c3b0vD_



not modelled 10.3 10
PDB header:oxidoreductase/rna
Chain: D: PDB Molecule:trna-dihydrouridine synthase;
PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna
91c4p1lA_



not modelled 10.3 32
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 chromohalobacter salexigens dsm 3043 (csal_2479), target efi-510085,3 with bound d-glucuronate, spg i213
92c4ln5A_



not modelled 10.2 32
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 burkholderia ambifaria (bamb_6123), target efi-510059, with bound3 glycerol and chloride ion
93c1urzC_



not modelled 10.1 21
PDB header:virus/viral protein
Chain: C: PDB Molecule:envelope protein;
PDBTitle: low ph induced, membrane fusion conformation of the2 envelope protein of tick-borne encephalitis virus
94c4mx6A_



not modelled 10.1 26
PDB header:transport protein
Chain: A: PDB Molecule:trap-type c4-dicarboxylate:h+ symport system substrate-
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 shewanella oneidensis (so_3134), target efi-510275, with bound3 succinate
95c3c6dB_



not modelled 9.8 23
PDB header:virus
Chain: B: PDB Molecule:polyprotein;
PDBTitle: the pseudo-atomic structure of dengue immature virus
96c3uzeC_



not modelled 9.7 22
PDB header:immune system
Chain: C: PDB Molecule:envelope protein;
PDBTitle: crystal structure of the dengue virus serotype 3 envelope protein2 domain iii in complex with the variable domains of mab 4e11
97c6epkA_



not modelled 9.5 25
PDB header:viral protein
Chain: A: PDB Molecule:envelope protein e;
PDBTitle: crystal structure of the precursor membrane protein-envelope protein2 heterodimer from the yellow fever virus
98c4ovqA_



not modelled 9.4 16
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate abc transporter, substrate-binding
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 roseobacter denitrificans, target efi-510230, with bound beta-d-3 glucuronate
99c4ng7A_



not modelled 9.4 21
PDB header:transport protein
Chain: A: PDB Molecule:trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 citrobacter koseri (cko_04899), target efi-510094, apo, open3 structure

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite