Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0807_(-)_901638_902027
DateFri Jul 26 01:50:39 BST 2019
Unique Job IDe2f5af2d599941d9
SequenceMSARDRVDPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.782 Y:36.550 Z:26.944
Model (left) based on template c4nssA_
Top template information
PDB header:unknown function
Chain: A: PDB Molecule:mycobacterial protein;
PDBTitle: a structural and functional investigation of a novel protein from2 mycobacterium smegmatis implicated in mycobacterial macrophage3 survivability
Confidence and coverage
Confidence:100.0% Coverage: 88%
113 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4nssA_



100.0 66
PDB header:unknown function
Chain: A: PDB Molecule:mycobacterial protein;
PDBTitle: a structural and functional investigation of a novel protein from2 mycobacterium smegmatis implicated in mycobacterial macrophage3 survivability
2d2cfua1



94.6 11
Fold:SCP-like
Superfamily:SCP-like
Family:Alkylsulfatase C-terminal domain-like
3c3bn8A_



90.3 18
PDB header:transport protein
Chain: A: PDB Molecule:putative sterol carrier protein 2;
PDBTitle: crystal structure of a putative sterol carrier protein type 2 (af1534)2 from archaeoglobus fulgidus dsm 4304 at 2.11 a resolution
4d1ikta_



89.7 13
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
5d1pz4a_



86.9 12
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
6c3bdqB_



83.9 17
PDB header:lipid transport
Chain: B: PDB Molecule:sterol carrier protein 2-like 2;
PDBTitle: room tempreture crystal structure of sterol carrier protein-2 2 like-2
7c4nurB_



82.4 18
PDB header:hydrolase
Chain: B: PDB Molecule:psdsa;
PDBTitle: crystal structure of thermostable alkylsulfatase sdsap from2 pseudomonas sp. s9
8c2cfuA_



82.1 11
PDB header:hydrolase
Chain: A: PDB Molecule:sdsa1;
PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
9c4pdxB_



79.5 18
PDB header:hydrolase
Chain: B: PDB Molecule:putative alkyl/aryl-sulfatase yjcs;
PDBTitle: crystal structure of escherchia coli uncharacterized protein yjcs
10c4jgxB_



78.5 12
PDB header:lipid binding protein
Chain: B: PDB Molecule:fatty acid-binding protein;
PDBTitle: the structure of sterol carrier protein 2 from the yeast yarrowia2 lipolytica
11c2yheD_



78.3 20
PDB header:hydrolase
Chain: D: PDB Molecule:sec-alkyl sulfatase;
PDBTitle: structure determination of the stereoselective inverting sec-2 alkylsulfatase pisa1 from pseudomonas sp.
12c2nsfA_



78.2 17
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein cgl3021;
PDBTitle: crystal structure of the mycothiol-dependent maleylpyruvate isomerase
13d1c44a_



76.3 15
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
14c2ozgA_



73.6 19
PDB header:transferase
Chain: A: PDB Molecule:gcn5-related n-acetyltransferase;
PDBTitle: crystal structure of gcn5-related n-acetyltransferase (yp_325469.1)2 from anabaena variabilis atcc 29413 at 2.00 a resolution
15d2i00a1



70.0 12
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like
16c2hv2D_



68.3 15
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of conserved protein of unknown function from2 enterococcus faecalis v583 at 2.4 a resolution, probable n-3 acyltransferase
17d2ozga1



65.6 15
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like
18d2hv2a1



60.4 20
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like
19c3bkrA_



57.9 16
PDB header:lipid binding protein
Chain: A: PDB Molecule:sterol carrier protein-2 like-3;
PDBTitle: crystal structure of sterol carrier protein-2 like-3 (scp2-2 l3) from aedes aegypti
20c2i00D_



56.1 11
PDB header:transferase
Chain: D: PDB Molecule:acetyltransferase, gnat family;
PDBTitle: crystal structure of acetyltransferase (gnat family) from enterococcus2 faecalis
21c3n7zD_



not modelled 55.7 10
PDB header:transferase
Chain: D: PDB Molecule:acetyltransferase, gnat family;
PDBTitle: crystal structure of acetyltransferase from bacillus anthracis
22c4ueiA_



not modelled 51.2 10
PDB header:transferase
Chain: A: PDB Molecule:sterol carrier protein 2/3-oxoacyl-coa thiolase;
PDBTitle: solution structure of the sterol carrier protein domain 22 of helicoverpa armigera
23d1wfra_



not modelled 41.7 22
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
24c4e0iC_



not modelled 26.2 28
PDB header:oxidoreductase
Chain: C: PDB Molecule:mitochondrial fad-linked sulfhydryl oxidase erv1;
PDBTitle: crystal structure of the c30s/c133s mutant of erv1 from saccharomyces2 cerevisiae
25c6o2uB_



not modelled 22.8 26
PDB header:signaling protein
Chain: B: PDB Molecule:store-operated calcium entry-associated regulatory factor;
PDBTitle: crystal structure of the saraf luminal domain
26d1w96c1



not modelled 17.7 38
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
27c4yh8B_



not modelled 16.8 23
PDB header:splicing
Chain: B: PDB Molecule:splicing factor u2af 59 kda subunit;
PDBTitle: structure of yeast u2af complex
28c4qpgA_



not modelled 14.7 23
PDB header:virus
Chain: A: PDB Molecule:capsid protein vp1;
PDBTitle: crystal structure of empty hepatitis a virus
29d1ulza1



not modelled 14.2 50
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
30d1w96a1



not modelled 14.0 38
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
31d2j9ga1



not modelled 13.6 63
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
32d1ss6a_



not modelled 13.1 29
Fold:NSFL1 (p97 ATPase) cofactor p47, SEP domain
Superfamily:NSFL1 (p97 ATPase) cofactor p47, SEP domain
Family:NSFL1 (p97 ATPase) cofactor p47, SEP domain
33c3sxnC_



not modelled 12.6 13
PDB header:transferase
Chain: C: PDB Molecule:enhanced intracellular survival protein;
PDBTitle: mycobacterium tuberculosis eis protein initiates modulation of host2 immune responses by acetylation of dusp16/mkp-7
34c6rftB_



not modelled 12.3 11
PDB header:antibiotic
Chain: B: PDB Molecule:uncharacterized n-acetyltransferase d2e36_21790;
PDBTitle: crystal structure of eis2 from mycobacterium abscessus bound to2 acetyl-coa
35c2hj3A_



not modelled 10.6 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:sulfhydryl oxidase erv1p;
PDBTitle: structure of the arabidopsis thaliana erv1 thiol oxidase
36c4e0iA_



not modelled 10.2 35
PDB header:oxidoreductase
Chain: A: PDB Molecule:mitochondrial fad-linked sulfhydryl oxidase erv1;
PDBTitle: crystal structure of the c30s/c133s mutant of erv1 from saccharomyces2 cerevisiae
37d1oqca_



not modelled 9.8 20
Fold:Four-helical up-and-down bundle
Superfamily:FAD-dependent thiol oxidase
Family:FAD-dependent thiol oxidase
38c2xueB_



not modelled 9.7 32
PDB header:oxidoreductase
Chain: B: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: crystal structure of jmjd3
39d1s7ia_



not modelled 9.3 56
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:DGPF domain (Pfam 04946)
40c3r1kA_



not modelled 9.2 9
PDB header:transferase
Chain: A: PDB Molecule:enhanced intracellular survival protein;
PDBTitle: crystal structure of acetyltransferase eis from mycobacterium2 tuberculosis h37rv in complex with coa and an acetamide moiety
41c5ntbB_



not modelled 9.1 12
PDB header:protease inhibitor
Chain: B: PDB Molecule:papain inhibitor;
PDBTitle: streptomyces papain inhibitor (spi)
42c5k2yB_



not modelled 8.7 14
PDB header:transport protein
Chain: B: PDB Molecule:probable periplasmic sugar-binding lipoprotein uspc;
PDBTitle: crystal structure of m. tuberculosis uspc (monoclinic crystal form)
43d1m7xa2



not modelled 8.7 31
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
44c4g68A_



not modelled 8.6 11
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter;
PDBTitle: biochemical and structural insights into xylan utilization by the2 thermophilic bacteriumcaldanaerobius polysaccharolyticus
45c1uebB_



not modelled 8.4 21
PDB header:rna binding protein
Chain: B: PDB Molecule:elongation factor p;
PDBTitle: crystal structure of translation elongation factor p from2 thermus thermophilus hb8
46c3vxbA_



not modelled 8.2 12
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative sugar-binding lipoprotein;
PDBTitle: crystal structure of bxle from streptomyces thermoviolaceus opc-520
47d1pbaa_



not modelled 7.6 27
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
48c4ecdB_



not modelled 7.5 37
PDB header:lyase
Chain: B: PDB Molecule:chorismate synthase;
PDBTitle: 2.5 angstrom resolution crystal structure of bifidobacterium longum2 chorismate synthase
49c4pmkA_



not modelled 7.4 17
PDB header:plant protein
Chain: A: PDB Molecule:kiwellin;
PDBTitle: crystal structure of kiwellin
50c5mkbF_



not modelled 7.4 11
PDB header:sugar binding protein
Chain: F: PDB Molecule:male1;
PDBTitle: maltodextrin binding protein male1 from l. casei bl23 without ligand
51c4qpiA_



not modelled 7.2 23
PDB header:virus
Chain: A: PDB Molecule:capsid protein vp1;
PDBTitle: crystal structure of hepatitis a virus
52d1yrxa1



not modelled 7.2 25
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:BLUF domain
53c3mbgC_



not modelled 7.2 24
PDB header:flavoprotein
Chain: C: PDB Molecule:fad-linked sulfhydryl oxidase alr;
PDBTitle: crystal structure of human augmenter of liver regeneration (alr)
54c4avrA_



not modelled 7.1 33
PDB header:unknown function
Chain: A: PDB Molecule:pa4485;
PDBTitle: crystal structure of the hypothetical protein pa4485 from2 pseudomonas aeruginosa
55c4ua8A_



not modelled 7.0 7
PDB header:transport protein
Chain: A: PDB Molecule:carbohydrate abc transporter substrate-binding protein,
PDBTitle: eur_01830 (maltotriose-binding protein) complexed with maltotriose
56d1pcaa1



not modelled 6.9 38
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
57d1k0ha_



not modelled 6.7 63
Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:gpFII-like
58c1q15A_



not modelled 6.6 20
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cara;
PDBTitle: carbapenam synthetase
59d1nsaa2



not modelled 6.5 23
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
60c3k6wA_



not modelled 6.4 15
PDB header:transport protein
Chain: A: PDB Molecule:solute-binding protein ma_0280;
PDBTitle: apo and ligand bound structures of moda from the archaeon2 methanosarcina acetivorans
61c3cfxA_



not modelled 6.3 15
PDB header:transport protein
Chain: A: PDB Molecule:upf0100 protein ma_0280;
PDBTitle: crystal structure of m. acetivorans periplasmic binding protein2 moda/wtpa with bound tungstate
62d1fdra1



not modelled 6.3 40
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Riboflavin synthase domain-like
Family:Ferredoxin reductase FAD-binding domain-like
63c2xxzA_



not modelled 6.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: crystal structure of the human jmjd3 jumonji domain
64d2buna1



not modelled 6.2 25
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:BLUF domain
65c5kwpA_



not modelled 6.2 44
PDB header:de novo protein
Chain: A: PDB Molecule:designed peptide nc_eeh_d2;
PDBTitle: nmr solution structure of designed peptide nc_eeh_d2
66c6fpgH_



not modelled 6.1 21
PDB header:cell invasion
Chain: H: PDB Molecule:ripening-related protein 3;
PDBTitle: structure of the ustilago maydis chorismate mutase 1 in complex with a2 zea mays kiwellin
67c3gitA_



not modelled 6.0 21
PDB header:transferase
Chain: A: PDB Molecule:carbon monoxide dehydrogenase/acetyl-coa synthase subunit
PDBTitle: crystal structure of a truncated acetyl-coa synthase
68c4uzmA_



not modelled 5.8 78
PDB header:structural protein
Chain: A: PDB Molecule:putative membrane protein igaa homolog;
PDBTitle: shotgun proteolysis: a practical application
69d1kwma2



not modelled 5.7 23
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
70c3t69A_



not modelled 5.6 18
PDB header:transferase
Chain: A: PDB Molecule:putative 2-dehydro-3-deoxygalactonokinase;
PDBTitle: crystal structure of a putative 2-dehydro-3-deoxygalactonokinase2 protein from sinorhizobium meliloti
71c4gdxB_



not modelled 5.5 19
PDB header:hydrolase
Chain: B: PDB Molecule:gamma-glutamyltranspeptidase 1 light chain;
PDBTitle: crystal structure of human gamma-glutamyl transpeptidase--glutamate2 complex
72d1pyta_



not modelled 5.5 38
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
73d2boaa2



not modelled 5.4 23
Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
74c4ebjB_



not modelled 5.3 24
PDB header:transferase
Chain: B: PDB Molecule:aminoglycoside nucleotidyltransferase;
PDBTitle: crystal structure of aminoglycoside 4'-o-adenylyltransferase ant(4')-2 iib, apo
75d1x0pa1



not modelled 5.3 38
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:BLUF domain
76c4ezhA_



not modelled 5.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: the crystal structure of kdm6b bound with h3k27me3 peptide
77c2hfnJ_



not modelled 5.2 25
PDB header:electron transport
Chain: J: PDB Molecule:synechocystis photoreceptor (slr1694);
PDBTitle: crystal structures of the synechocystis photoreceptor slr1694 reveal2 distinct structural states related to signaling

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