Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0814c_(sseC2)_908184_908486
DateFri Jul 26 01:50:40 BST 2019
Unique Job IDc32594cb865be49f
SequenceMCSGPKQGLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.987 Y:29.763 Z:34.149
Model (left) based on template c1h8lA_
Top template information
PDB header:carboxypeptidase
Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882;
PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa
Confidence and coverage
Confidence: 97.6% Coverage: 74%
74 residues ( 74% of your sequence) have been modelled with 97.6% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
100 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1h8lA_



97.6 20
PDB header:carboxypeptidase
Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882;
PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa
2d1h8la1



97.5 20
Fold:Prealbumin-like
Superfamily:Carboxypeptidase regulatory domain-like
Family:Carboxypeptidase regulatory domain
3c3mn8A_



97.3 23
PDB header:hydrolase
Chain: A: PDB Molecule:lp15968p;
PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short
4c2nsmA_



97.3 21
PDB header:hydrolase
Chain: A: PDB Molecule:carboxypeptidase n catalytic chain;
PDBTitle: crystal structure of the human carboxypeptidase n (kininase i)2 catalytic domain
5c5aq0B_



97.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:carboxypeptidase d;
PDBTitle: the structure of the transthyretin-like domain of the first2 catalytic domain of the human carboxypeptidase d
6c1uwyA_



96.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:carboxypeptidase m;
PDBTitle: crystal structure of human carboxypeptidase m
7d3pccm_



96.3 20
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
8d1uwya1



96.1 19
Fold:Prealbumin-like
Superfamily:Carboxypeptidase regulatory domain-like
Family:Carboxypeptidase regulatory domain
9c4ilvB_



95.9 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:intradiol ring-cleavage dioxygenase;
PDBTitle: structure of the dioxygenase domain of sacte_2871, a novel dioxygenase2 carbohydrate-binding protein fusion from the cellulolytic bacterium3 streptomyces sp. sirexaa-e
10c3n9tA_



95.7 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:pnpc;
PDBTitle: cryatal structure of hydroxyquinol 1,2-dioxygenase from pseudomonas2 putida dll-e4
11d2burb1



95.4 19
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
12d1nkga1



95.3 15
Fold:Prealbumin-like
Superfamily:Starch-binding domain-like
Family:Rhamnogalacturonase B, RhgB, middle domain
13c2xsuA_



95.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:catechol 1,2 dioxygenase;
PDBTitle: crystal structure of the a72g mutant of acinetobacter2 radioresistens catechol 1,2 dioxygenase
14c2azqA_



95.1 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:catechol 1,2-dioxygenase;
PDBTitle: crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla2 c-1
15c1tmxA_



94.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:hydroxyquinol 1,2-dioxygenase;
PDBTitle: crystal structure of hydroxyquinol 1,2-dioxygenase from nocardioides2 simplex 3e
16c3th1C_



94.7 25
PDB header:oxidoreductase
Chain: C: PDB Molecule:chlorocatechol 1,2-dioxygenase;
PDBTitle: crystal structure of chlorocatechol 1,2-dioxygenase from pseudomonas2 putida
17c2boyC_



94.3 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase;
PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from rhodococcus2 opacus 1cp
18d1s9aa_



94.2 23
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
19c5td3B_



93.3 38
PDB header:oxidoreductase
Chain: B: PDB Molecule:catechol 1,2-dioxygenase;
PDBTitle: crystal structure of catechol 1,2-dioxygenase from burkholderia2 vietnamiensis
20c3hj8A_



93.3 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:catechol 1,2-dioxygenase;
PDBTitle: crystal structure determination of catechol 1,2-dioxygenase from2 rhodococcus opacus 1cp in complex with 4-chlorocatechol
21d3pcca_



not modelled 93.0 21
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
22d1dmha_



not modelled 92.8 17
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
23c3kptA_



not modelled 92.7 18
PDB header:cell adhesion
Chain: A: PDB Molecule:collagen adhesion protein;
PDBTitle: crystal structure of bcpa, the major pilin subunit of2 bacillus cereus
24c3irpX_



not modelled 92.5 24
PDB header:cell adhesion
Chain: X: PDB Molecule:uro-adherence factor a;
PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution
25d2bura1



not modelled 92.1 17
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
26c2x5pA_



not modelled 91.5 26
PDB header:protein binding
Chain: A: PDB Molecule:fibronectin binding protein;
PDBTitle: crystal structure of the streptococcus pyogenes fibronectin binding2 protein fbab-b
27c4jdzA_



not modelled 91.3 12
PDB header:cell adhesion
Chain: A: PDB Molecule:ser-asp rich fibrinogen/bone sialoprotein-binding protein
PDBTitle: structures of sdrd from staphylococcus aureus reveal the molecular2 mechanism of how the cell surface receptors recognize their ligands
28c2ww8A_



not modelled 89.6 23
PDB header:cell adhesion
Chain: A: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structure of the pilus adhesin (rrga) from streptococcus2 pneumoniae
29c3e8vA_



not modelled 87.9 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:possible transglutaminase-family protein;
PDBTitle: crystal structure of a possible transglutaminase-family protein2 proteolytic fragment from bacteroides fragilis
30c2qz7B_



not modelled 87.1 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein sco6318;
PDBTitle: the crystal structure of a homologue of telluride resistance protein2 (terd), sco6318 from streptomyces coelicolor a3(2)
31c5vg2B_



not modelled 85.0 31
PDB header:oxidoreductase
Chain: B: PDB Molecule:intradiol ring-cleavage dioxygenase;
PDBTitle: intradiol ring-cleavage dioxygenase from tetranychus urticae
32c2kxvA_



not modelled 83.4 27
PDB header:unknown function
Chain: A: PDB Molecule:tellurite resistance protein;
PDBTitle: nmr structure and calcium-binding properties of the tellurite2 resistance protein terd from klebsiella pneumoniae
33c3ibzA_



not modelled 83.2 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative tellurium resistant like protein terd;
PDBTitle: crystal structure of putative tellurium resistant like protein (terd)2 from streptomyces coelicolor a3(2)
34c4acqA_



not modelled 82.7 17
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:alpha-2-macroglobulin;
PDBTitle: alpha-2 macroglobulin
35c2qngA_



not modelled 81.4 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein sav2460;
PDBTitle: crystal structure of unknown function protein sav2460
36c4acqC_



not modelled 77.2 17
PDB header:hydrolase inhibitor
Chain: C: PDB Molecule:alpha-2-macroglobulin;
PDBTitle: alpha-2 macroglobulin
37c6fwvB_



not modelled 75.7 15
PDB header:unknown function
Chain: B: PDB Molecule:collagen adhesion protein;
PDBTitle: the bacillus anthracis tie protein
38c4u3sB_



not modelled 75.6 24
PDB header:protein binding
Chain: B: PDB Molecule:cellulosomal scaffoldin;
PDBTitle: crystal structure of coh3scab-xdoc_m1scaa complex: a n-terminal2 interface mutant of type ii cohesin-x-dockerin complex from3 acetivibrio cellulolyticus
39c4rtdA_



not modelled 72.2 19
PDB header:lipid binding protein
Chain: A: PDB Molecule:uncharacterized lipoprotein yfhm;
PDBTitle: escherichia coli alpha-2-macroglobulin activated by porcine elastase
40d1jhna4



not modelled 71.9 29
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Calnexin/calreticulin
41c1jhnA_



not modelled 71.6 29
PDB header:chaperone
Chain: A: PDB Molecule:calnexin;
PDBTitle: crystal structure of the lumenal domain of calnexin
42c5k39B_



not modelled 70.3 13
PDB header:structural protein
Chain: B: PDB Molecule:dockerin module from a protein of unknown function;
PDBTitle: the type ii cohesin dockerin complex from clostridium thermocellum
43c1ti2F_



not modelled 68.5 30
PDB header:oxidoreductase
Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit;
PDBTitle: crystal structure of pyrogallol-phloroglucinol transhydroxylase from2 pelobacter acidigallici
44c4uzgA_



not modelled 66.6 20
PDB header:structural protein
Chain: A: PDB Molecule:surface protein spb1;
PDBTitle: crystal structure of group b streptococcus pilus 2b backbone protein2 sak_1440
45c3uafA_



not modelled 64.2 16
PDB header:protein binding
Chain: A: PDB Molecule:ttr-52;
PDBTitle: crystal structure of a ttr-52 mutant of c. elegans
46c4kdwA_



not modelled 63.4 20
PDB header:cell adhesion
Chain: A: PDB Molecule:antifreeze protein;
PDBTitle: crystal structure of a bacterial immunoglobulin-like domain from the2 m. primoryensis ice-binding adhesin
47c3rg0A_



not modelled 62.5 21
PDB header:chaperone
Chain: A: PDB Molecule:calreticulin;
PDBTitle: structural and functional relationships between the lectin and arm2 domains of calreticulin
48c4u48A_



not modelled 62.3 25
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:putative inner membrane lipoprotein;
PDBTitle: crystal structure of salmonella alpha-2-macroglobulin
49c3mxnB_



not modelled 61.5 40
PDB header:replication
Chain: B: PDB Molecule:recq-mediated genome instability protein 2;
PDBTitle: crystal structure of the rmi core complex
50c5hcfF_



not modelled 58.4 27
PDB header:chaperone
Chain: F: PDB Molecule:calreticulin, putative,calreticulin, putative;
PDBTitle: t. cruzi calreticulin globular domain
51c5hcaB_



not modelled 57.3 18
PDB header:sugar binding protein
Chain: B: PDB Molecule:calreticulin,calreticulin;
PDBTitle: globular domain of the entamoeba histolytica calreticulin in complex2 with glucose
52c3o0vA_



not modelled 55.1 21
PDB header:chaperone
Chain: A: PDB Molecule:calreticulin;
PDBTitle: crystal structure of the calreticulin lectin domain
53d1nqja_



not modelled 53.7 16
Fold:CUB-like
Superfamily:Collagen-binding domain
Family:Collagen-binding domain
54c4z8wA_



not modelled 49.9 24
PDB header:allergen
Chain: A: PDB Molecule:major pollen allergen pla l 1;
PDBTitle: crystal structure of the major plantain pollen allergen pla l 1
55c2h0eA_



not modelled 47.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:transthyretin-like protein pucm;
PDBTitle: crystal structure of pucm in the absence of substrate
56c4q14B_



not modelled 42.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:5-hydroxyisourate hydrolase;
PDBTitle: crystal structure of 5-hydroxyisourate hydrolase from brucella2 melitensis
57c3c12A_



not modelled 39.8 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar protein;
PDBTitle: crystal structure of flgd from xanthomonas campestris:2 insights into the hook capping essential for flagellar3 assembly
58c2x9yA_



not modelled 39.2 27
PDB header:cell adhesion
Chain: A: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structure of the pilus backbone (rrgb) from streptococcus2 pneumoniae
59d1kgia_



not modelled 38.1 14
Fold:Prealbumin-like
Superfamily:Transthyretin (synonym: prealbumin)
Family:Transthyretin (synonym: prealbumin)
60d1f86a_



not modelled 36.7 19
Fold:Prealbumin-like
Superfamily:Transthyretin (synonym: prealbumin)
Family:Transthyretin (synonym: prealbumin)
61d1ttaa_



not modelled 33.6 19
Fold:Prealbumin-like
Superfamily:Transthyretin (synonym: prealbumin)
Family:Transthyretin (synonym: prealbumin)
62d1ei5a2



not modelled 32.4 50
Fold:Streptavidin-like
Superfamily:D-aminopeptidase, middle and C-terminal domains
Family:D-aminopeptidase, middle and C-terminal domains
63c4e9lA_



not modelled 31.5 20
PDB header:cell adhesion
Chain: A: PDB Molecule:attaching and effacing protein, pathogenesis factor;
PDBTitle: fdec, a novel broadly conserved escherichia coli adhesin eliciting2 protection against urinary tract infections
64c2xetB_



not modelled 31.3 19
PDB header:transport protein
Chain: B: PDB Molecule:f1 capsule-anchoring protein;
PDBTitle: conserved hydrophobic clusters on the surface of the caf1a usher2 c-terminal domain are important for f1 antigen assembly
65d1tfpa_



not modelled 30.6 12
Fold:Prealbumin-like
Superfamily:Transthyretin (synonym: prealbumin)
Family:Transthyretin (synonym: prealbumin)
66c3qvaB_



not modelled 30.4 34
PDB header:hydrolase
Chain: B: PDB Molecule:transthyretin-like protein;
PDBTitle: structure of klebsiella pneumoniae 5-hydroxyisourate hydrolase
67d1oo2a_



not modelled 29.9 19
Fold:Prealbumin-like
Superfamily:Transthyretin (synonym: prealbumin)
Family:Transthyretin (synonym: prealbumin)
68c2gpzC_



not modelled 29.4 17
PDB header:hydrolase
Chain: C: PDB Molecule:transthyretin-like protein;
PDBTitle: transthyretin-like protein from salmonella dublin
69c6b6lB_



not modelled 29.3 27
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolase family 2, sugar binding domain protein;
PDBTitle: the crystal structure of glycosyl hydrolase family 2 (gh2) member from2 bacteroides cellulosilyticus dsm 14838
70c2pz4A_



not modelled 27.5 16
PDB header:cell adhesion
Chain: A: PDB Molecule:protein gbs052;
PDBTitle: crystal structure of spab (gbs52), the minor pilin in gram-positive2 pathogen streptococcus agalactiae
71c4p0dA_



not modelled 23.8 12
PDB header:structural protein
Chain: A: PDB Molecule:trypsin-resistant surface t6 protein;
PDBTitle: the t6 backbone pilin of serotype m6 streptococcus pyogenes has a2 modular three-domain structure decorated with variable loops and3 extensions
72d2qlvb1



not modelled 23.8 16
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
73c4a5wA_



not modelled 21.2 17
PDB header:immune system
Chain: A: PDB Molecule:complement c5;
PDBTitle: crystal structure of c5b6
74c4n0rB_



not modelled 19.7 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of a putative glycoside hydrolase (bvu_0362) from2 bacteroides vulgatus atcc 8482 at 1.80 a resolution
75c6czjA_



not modelled 19.0 28
PDB header:de novo protein
Chain: A: PDB Molecule:b10;
PDBTitle: structure of a redesigned beta barrel, b10
76d2f69a1



not modelled 19.0 32
Fold:open-sided beta-meander
Superfamily:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Family:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
77c4cffB_



not modelled 18.0 24
PDB header:transferase
Chain: B: PDB Molecule:5'-amp-activated protein kinase subunit beta-1;
PDBTitle: structure of full length human ampk in complex with a small molecule2 activator, a thienopyridone derivative (a-769662)
78c5t0zB_



not modelled 16.9 24
PDB header:structural protein
Chain: B: PDB Molecule:lipoprotein, putative;
PDBTitle: pelc from geobacter metallireducens
79c6mr1A_



not modelled 15.6 44
PDB header:protein binding
Chain: A: PDB Molecule:carbon dioxide concentrating mechanism protein;
PDBTitle: rbcs-like subdomain of ccmm
80d1ew4a_



not modelled 15.4 24
Fold:N domain of copper amine oxidase-like
Superfamily:Frataxin/Nqo15-like
Family:Frataxin-like
81c4fe9A_



not modelled 15.3 20
PDB header:carbohydrate-binding protein
Chain: A: PDB Molecule:outer membrane protein susf;
PDBTitle: crystal structure of susf from bacteroides thetaiotaomicron
82d1cwva2



not modelled 15.1 22
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Invasin/intimin cell-adhesion fragments
Family:Invasin/intimin cell-adhesion fragments
83c6hbbA_



not modelled 14.6 56
PDB header:protein binding
Chain: A: PDB Molecule:carbon dioxide concentrating mechanism protein ccmm;
PDBTitle: crystal structure of the small subunit-like domain 1 of ccmm from2 synechococcus elongatus (strain pcc 7942)
84c2kmcA_



not modelled 14.3 23
PDB header:cell adhesion
Chain: A: PDB Molecule:fermitin family homolog 1;
PDBTitle: solution structure of the n-terminal domain of kindlin-1
85c1sddB_



not modelled 14.3 26
PDB header:blood clotting
Chain: B: PDB Molecule:coagulation factor v;
PDBTitle: crystal structure of bovine factor vai
86c3cdzB_



not modelled 14.2 26
PDB header:blood clotting
Chain: B: PDB Molecule:coagulation factor viii light chain;
PDBTitle: crystal structure of human factor viii
87c6cztA_



not modelled 14.0 38
PDB header:cell adhesion
Chain: A: PDB Molecule:alginate biosynthesis protein algf;
PDBTitle: cs-rosetta determined structures of the n-terminal domain of algf from2 p. aeruginosa
88d1knva_



not modelled 13.8 15
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Cfr10I/Bse634I
89c3n6yA_



not modelled 13.7 23
PDB header:unknown function
Chain: A: PDB Molecule:immunoglobulin-like protein;
PDBTitle: crystal structure of an immunoglobulin-like protein (pa1606) from2 pseudomonas aeruginosa at 1.50 a resolution
90c6qm2A_



not modelled 12.9 44
PDB header:hydrolase
Chain: A: PDB Molecule:type-2 restriction enzyme nlaiv;
PDBTitle: nlaiv restriction endonuclease
91d1rbli_



not modelled 12.7 22
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
92d2k49a2



not modelled 12.5 33
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
93d2k8ea1



not modelled 12.4 42
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
94c2ybvN_



not modelled 12.2 22
PDB header:lyase
Chain: N: PDB Molecule:ribulose bisphosphate carboxylase small subunit;
PDBTitle: structure of rubisco from thermosynechococcus elongatus
95d1cwva3



not modelled 11.8 24
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Invasin/intimin cell-adhesion fragments
Family:Invasin/intimin cell-adhesion fragments
96c1txkA_



not modelled 11.7 41
PDB header:biosynthetic protein
Chain: A: PDB Molecule:glucans biosynthesis protein g;
PDBTitle: crystal structure of escherichia coli opgg
97d1ir1s_



not modelled 11.7 33
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
98c3wmvA_



not modelled 11.7 41
PDB header:sugar binding protein
Chain: A: PDB Molecule:lectin;
PDBTitle: the structure of an anti-cancer lectin mytilec with ligand from the2 mussel mytilus galloprovincialis
99d1svdm1



not modelled 11.6 22
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit

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