Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0817c_(-)_910033_910845
DateFri Jul 26 01:50:40 BST 2019
Unique Job ID4354363a422caa39
SequenceMPMRKVLVGV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.186 Y:27.135 Z:33.376
Model (left) based on template d1ghha_
Top template information
Fold:DNA damage-inducible protein DinI
Superfamily:DNA damage-inducible protein DinI
Family:DNA damage-inducible protein DinI
Confidence and coverage
Confidence: 17.1% Coverage: 17%
45 residues ( 17% of your sequence) have been modelled with 17.1% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ghha_



17.1 16
Fold:DNA damage-inducible protein DinI
Superfamily:DNA damage-inducible protein DinI
Family:DNA damage-inducible protein DinI
2d2f9wa2



16.6 24
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:CoaX-like
3d2g3wa1



14.3 13
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:YaeQ-like
4d1hyoa1



13.6 54
Fold:SH3-like barrel
Superfamily:Fumarylacetoacetate hydrolase, FAH, N-terminal domain
Family:Fumarylacetoacetate hydrolase, FAH, N-terminal domain
5c3c0uA_



13.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yaeq;
PDBTitle: crystal structure of e.coli yaeq protein
6c3dzmB_



12.5 44
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical conserved protein;
PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27
7c6cfwE_



11.9 15
PDB header:membrane protein
Chain: E: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
8c2ddhA_



9.4 6
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa oxidase;
PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate
9d2bpa1_



9.3 29
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
10c5ys9A_



9.2 6
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coenzyme a oxidase 3;
PDBTitle: crystal structure of acyl-coa oxidase3 from yarrowia lipolytica
11c2kncA_



8.7 32
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
12c6ey4A_



8.6 9
PDB header:protein transport
Chain: A: PDB Molecule:gldm;
PDBTitle: periplasmic domain (residues 36-513) of gldm
13d1kvpa_



8.2 29
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
14c6giyA_



8.2 17
PDB header:structural protein
Chain: A: PDB Molecule:tssf;
PDBTitle: the baseplate complex from the type vi secretion system
15c4c47B_



6.7 12
PDB header:cell adhesion
Chain: B: PDB Molecule:inner membrane lipoprotein;
PDBTitle: salmonella enterica trimeric lipoprotein sadb
16c5k3jA_



6.5 8
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coenzyme a oxidase;
PDBTitle: crystals structure of acyl-coa oxidase-2 in caenorhabditis elegans2 bound with fad, ascaroside-coa, and atp
17c5y9dA_



5.7 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coenzyme a oxidase 1;
PDBTitle: crystal structure of acyl-coa oxidase1 from yarrowia lipolytica
18c2lifA_



5.7 60
PDB header:viral protein, membrane protein
Chain: A: PDB Molecule:core protein p21;
PDBTitle: solution structure of kkgf
19d1qd1a2



5.4 12
Fold:Ferredoxin-like
Superfamily:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Family:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
20d2b7oa1



5.3 20
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class-II DAHP synthetase
21c2y69Y_



not modelled 5.3 40
PDB header:electron transport
Chain: Y: PDB Molecule:cytochrome c oxidase subunit 7c;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular oxygen
22d1m06f_



not modelled 5.2 43
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below