Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0827c_(-)_920744_921136
DateFri Jul 26 01:50:41 BST 2019
Unique Job ID32473abffd019721
SequenceMYADSGPDPL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:51.638 Y:61.927 Z:32.268
Model (left) based on template c2lkpB_
Top template information
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
Confidence and coverage
Confidence:100.0% Coverage: 88%
114 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2lkpB_
100.0 32
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
2d1r1ta_
99.9 30
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
3d1r1ua_
99.9 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
4c1r22B_
99.9 31
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
5c2kkoB_
99.9 29
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
6c3pqkD_
99.9 33
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
7c4omzG_
99.9 32
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
8c2zkzC_
99.9 20
PDB header:transcription
Chain: C: PDB Molecule:transcriptional repressor pagr;
PDBTitle: crystal structure of the transcriptional repressor pagr of bacillus2 anthracis
9c3jthA_
99.9 32
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
10c6j0eB_
99.9 30
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
11c2oqgA_
99.9 22
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
12d1u2wa1
99.9 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
13c6j05B_
99.9 30
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
14c2jscB_
99.9 31
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
15c3cuoB_
99.9 26
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
16c5xpqB_
99.9 31
PDB header:transcription
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator rv0081;
PDBTitle: crystal structure of m.tuberculosis rv0081
17c3f6vA_
99.9 33
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
18c3f6oB_
99.9 27
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
19d2p4wa1
99.8 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF1790-like
20d1ulya_
99.7 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
21c4g6qA_
not modelled 99.6 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
22d2d1ha1
not modelled 99.6 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
23c2qufB_
not modelled 99.6 18
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
24d1ub9a_
not modelled 99.5 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
25c5dukA_
not modelled 99.5 19
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
26c4nb5D_
not modelled 98.8 15
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
27c6cmvA_
not modelled 98.7 19
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
28c4gcvD_
not modelled 98.7 10
PDB header:transcription
Chain: D: PDB Molecule:putative transcription protein;
PDBTitle: structure of a putative transcription factor (pa1374)from pseudomonas2 aeruginosa
29d1sfxa_
not modelled 98.6 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
30c3ctaA_
not modelled 98.6 13
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
31d3ctaa1
not modelled 98.6 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
32d1y0ua_
not modelled 98.6 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
33c3r0aB_
not modelled 98.6 19
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
34c5hs9A_
not modelled 98.6 14
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator yodb;
PDBTitle: crystal structure of the quinone-bound yodb from b. subtilis
35c4a5mH_
not modelled 98.6 13
PDB header:transcription
Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr;
PDBTitle: redox regulator hypr in its oxidized form
36c5jbrA_
not modelled 98.5 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
37d1ku9a_
not modelled 98.5 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
38c5jlsA_
not modelled 98.5 14
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
39d2f2ea1
not modelled 98.5 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
40c4hqeB_
not modelled 98.5 15
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator qsrr;
PDBTitle: the crystal structure of qsrr-dna complex
41d1z7ua1
not modelled 98.5 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
42d2fswa1
not modelled 98.4 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
43c2gxgA_
not modelled 98.4 18
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
44c3df8A_
not modelled 98.3 20
PDB header:transcription
Chain: A: PDB Molecule:possible hxlr family transcriptional factor;
PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
45c3f3xA_
not modelled 98.3 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
46d2a61a1
not modelled 98.3 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
47d2fbia1
not modelled 98.3 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
48c4xrfA_
not modelled 98.3 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
49d2etha1
not modelled 98.3 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
50c3k0lA_
not modelled 98.2 21
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
51d1lnwa_
not modelled 98.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
52c5zhcA_
not modelled 98.2 20
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the padr-family transcriptional regulator rv34882 of mycobacterium tuberculosis h37rv
53d1p4xa2
not modelled 98.2 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
54d1mkma1
not modelled 98.2 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional regulator IclR, N-terminal domain
55c3zmdD_
not modelled 98.2 17
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
56d1yyva1
not modelled 98.2 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
57c2nyxB_
not modelled 98.2 14
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
58c2rdpA_
not modelled 98.2 18
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
59d2bv6a1
not modelled 98.1 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
60d1z05a1
not modelled 98.1 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain
61d2hr3a1
not modelled 98.1 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
62d1s3ja_
not modelled 98.1 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
63c4esfA_
not modelled 98.1 22
PDB header:transcription
Chain: A: PDB Molecule:padr-like transcriptional regulator;
PDBTitle: crystal structure of padr-like transcriptional regulator (bce3449)2 from bacillus cereus strain atcc 10987
64c4fhtA_
not modelled 98.1 24
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
65c5yhxH_
not modelled 98.1 22
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
66c3bj6B_
not modelled 98.1 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
67d1lj9a_
not modelled 98.1 6
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
68c3bpxB_
not modelled 98.1 11
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
69c3f8fA_
not modelled 98.1 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
70c3l7wA_
not modelled 98.1 16
PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein smu.1704;
PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
71c2l4aA_
not modelled 98.1 22
PDB header:dna binding protein
Chain: A: PDB Molecule:leucine responsive regulatory protein;
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
72c2nnnB_
not modelled 98.1 18
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
73c3zplE_
not modelled 98.1 26
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
74c3hhhA_
not modelled 98.0 22
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
75c4o6jA_
not modelled 98.0 14
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
76d1z91a1
not modelled 98.0 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
77c3g3zA_
not modelled 98.0 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
78d1biaa1
not modelled 98.0 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
79c5eriA_
not modelled 98.0 12
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
80d1jgsa_
not modelled 98.0 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
81c4esbA_
not modelled 98.0 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
82c3cjnA_
not modelled 98.0 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
83c3e6mD_
not modelled 98.0 21
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
84c4em1A_
not modelled 98.0 15
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
85c3nrvC_
not modelled 98.0 18
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
86c4a6dA_
not modelled 98.0 20
PDB header:transferase
Chain: A: PDB Molecule:hydroxyindole o-methyltransferase;
PDBTitle: crystal structure of human n-acetylserotonin2 methyltransferase (asmt) in complex with sam
87c3nqoB_
not modelled 97.9 15
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
88d3broa1
not modelled 97.9 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
89c6faqA_
not modelled 97.9 21
PDB header:dna binding protein
Chain: A: PDB Molecule:dna binding protein;
PDBTitle: structure of h. salinarum rosr (vng0258) grown from kbr
90c2fxaB_
not modelled 97.9 16
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
91c2wteB_
not modelled 97.9 15
PDB header:antiviral protein
Chain: B: PDB Molecule:csa3;
PDBTitle: the structure of the crispr-associated protein, csa3, from2 sulfolobus solfataricus at 1.8 angstrom resolution.
92c3hruA_
not modelled 97.9 17
PDB header:transcription
Chain: A: PDB Molecule:metalloregulator scar;
PDBTitle: crystal structure of scar with bound zn2+
93d2cg4a1
not modelled 97.9 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
94c2qwwB_
not modelled 97.9 13
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
95d1j5ya1
not modelled 97.9 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
96c2vbzA_
not modelled 97.9 26
PDB header:dna-binding protein
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
97c4ijaA_
not modelled 97.9 18
PDB header:protein binding
Chain: A: PDB Molecule:xylr protein;
PDBTitle: structure of s. aureus methicillin resistance factor mecr2
98d2fbha1
not modelled 97.9 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
99d1hsja1
not modelled 97.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
100d2frha1
not modelled 97.9 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
101c4mnuA_
not modelled 97.9 8
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
102c1mkmA_
not modelled 97.9 18
PDB header:transcription
Chain: A: PDB Molecule:iclr transcriptional regulator;
PDBTitle: crystal structure of the thermotoga maritima iclr
103c5h20A_
not modelled 97.9 13
PDB header:transcription regulator
Chain: A: PDB Molecule:putative padr-family transcriptional regulatory protein;
PDBTitle: x-ray structure of padr-like transcription factor from bacteroid2 fragilis
104c2x4hA_
not modelled 97.9 17
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
105c2g7uB_
not modelled 97.9 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1
106c4yifE_
not modelled 97.8 22
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
107c1f5tA_
not modelled 97.8 22
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
108c1fx7C_
not modelled 97.8 17
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
109c4q77B_
not modelled 97.8 12
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
110d2cfxa1
not modelled 97.8 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
111c2hoeA_
not modelled 97.8 19
PDB header:transferase
Chain: A: PDB Molecule:n-acetylglucosamine kinase;
PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution
112c3bddD_
not modelled 97.8 22
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
113c5x11G_
not modelled 97.8 17
PDB header:transcription/dna
Chain: G: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of bacillus subtilis padr in complex with operator2 dna
114d1p4xa1
not modelled 97.8 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
115c2fe3B_
not modelled 97.8 12
PDB header:dna binding protein
Chain: B: PDB Molecule:peroxide operon regulator;
PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch
116c2it0A_
not modelled 97.8 17
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
117d2fxaa1
not modelled 97.8 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
118d2cyya1
not modelled 97.8 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
119d1xmaa_
not modelled 97.8 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
120c1xmaA_
not modelled 97.8 13
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulator;
PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite