Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0835_(lpqQ)_930956_931600
DateFri Jul 26 01:50:42 BST 2019
Unique Job IDba651b25a36e3da2
SequenceVCCSTAAKSA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.863 Y:42.022 Z:38.264
Model (left) based on template c4esqA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:serine/threonine protein kinase;
PDBTitle: crystal structure of the extracellular domain of pknh from2 mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 80%
171 residues ( 80% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4esqA_



100.0 16
PDB header:transferase
Chain: A: PDB Molecule:serine/threonine protein kinase;
PDBTitle: crystal structure of the extracellular domain of pknh from2 mycobacterium tuberculosis
2c3lo3E_



37.2 24
PDB header:structure genomics, unknown function
Chain: E: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 colwellia psychrerythraea 34h.
3d2fiua1



35.6 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Atu0297-like
4c3dcaC_



20.8 22
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:rpa0582;
PDBTitle: crystal structure of the rpa0582- protein of unknown2 function from rhodopseudomonas palustris- a structural3 genomics target
5d1kr4a_



17.1 18
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
6c2b3gB_



14.4 26
PDB header:replication
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53n (fragment 33-60) bound to rpa70n
7d1vhfa_



11.5 19
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
8c4iyqB_



10.0 25
PDB header:protein binding
Chain: B: PDB Molecule:divalent ion tolerance protein cuta1;
PDBTitle: crystal structure of divalent ion tolerance protein cuta1 from2 ehrlichia chaffeensis
9d2zfha1



9.7 26
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
10c1xk8A_



9.7 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:divalent cation tolerant protein cuta;
PDBTitle: divalent cation tolerant protein cuta from homo sapiens o60888
11c3i08D_



9.6 12
PDB header:signaling protein
Chain: D: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of the s1-cleaved notch1 negative2 regulatory region (nrr)
12d1lmma_



9.5 22
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
13d1ukua_



9.3 27
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
14c6oswA_



9.0 16
PDB header:cell cycle
Chain: A: PDB Molecule:forkhead box m1;
PDBTitle: an order-to-disorder structural switch activates the foxm12 transcription factor
15c6gdxA_



8.5 16
PDB header:metal binding protein
Chain: A: PDB Molecule:periplasmic divalent cation tolerance protein;
PDBTitle: structure of cuta from synechococcus elongatus pcc7942 complexed with2 3 molecules of bis-tris
16d1j1ta_



8.3 38
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Alginate lyase
17d1osce_



8.1 26
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
18c4e98C_



7.7 16
PDB header:signaling protein
Chain: C: PDB Molecule:cuta1 divalent ion tolerance protein;
PDBTitle: crystal structure of possible cuta1 divalent ion tolerance protein2 from cryptosporidium parvum iowa ii
19c2mzdB_



7.6 29
PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: characterization of the p300 taz2-p53 tad2 complex and comparison with2 the p300 taz2-p53 tad1 complex
20c2ly4B_



6.8 29
PDB header:nuclear protein/antitumour protein
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail
21c2zfhA_



not modelled 6.5 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cuta;
PDBTitle: crystal structure of putative cuta1 from homo sapiens at 2.05a2 resolution
22d1p1la_



not modelled 6.4 31
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Divalent ion tolerance proteins CutA (CutA1)
23c5k8qB_



not modelled 6.4 30
PDB header:metal binding protein
Chain: B: PDB Molecule:zgc:136689;
PDBTitle: crystal structure of calcium-loaded calmodulin in complex with stra62 cambp2-site peptide.
24c2nuhA_



not modelled 6.2 18
PDB header:unknown function
Chain: A: PDB Molecule:periplasmic divalent cation tolerance protein;
PDBTitle: crystal structure of cuta from the phytopathgen bacterium xylella2 fastidiosa
25c3oqcB_



not modelled 6.1 40
PDB header:hydrolase
Chain: B: PDB Molecule:ufm1-specific protease 2;
PDBTitle: ubiquitin-fold modifier 1 specific protease, ufsp2
26c5hb8B_



not modelled 5.7 9
PDB header:transport protein
Chain: B: PDB Molecule:nucleoporin nup53;
PDBTitle: crystal structure of chaetomium thermophilum nup53 rrm (space group2 p3121)
27c3ahpA_



not modelled 5.7 15
PDB header:electron transport
Chain: A: PDB Molecule:cuta1;
PDBTitle: crystal structure of stable protein, cuta1, from a psychrotrophic2 bacterium shewanella sp. sib1
28c5ejjA_



not modelled 5.3 40
PDB header:hydrolase
Chain: A: PDB Molecule:ufm1-specific protease;
PDBTitle: crystal structure of ufsp from c.elegans

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite