Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0866_(moaE2)_963872_964297
DateFri Jul 26 01:50:45 BST 2019
Unique Job ID0308b54a876e0af2
SequenceMTQVLRAALT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.276 Y:45.019 Z:37.977
Model (left) based on template c6jbzC_
Top template information
PDB header:transferase
Chain: C: PDB Molecule:molybdenum cofactor biosynthesis protein e;
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
Confidence and coverage
Confidence:100.0% Coverage:100%
141 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6jbzC_



100.0 100
PDB header:transferase
Chain: C: PDB Molecule:molybdenum cofactor biosynthesis protein e;
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
2c6jc0D_



100.0 65
PDB header:transferase
Chain: D: PDB Molecule:putative molybdenum cofactor biosynthesis protein;
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
3c2qieA_



100.0 29
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin-converting factor subunit 2;
PDBTitle: staphylococcus aureus molybdopterin synthase in complex with precursor2 z
4c2omdB_



100.0 28
PDB header:lyase
Chain: B: PDB Molecule:molybdopterin-converting factor subunit 2;
PDBTitle: crystal structure of molybdopterin converting factor subunit 22 (aq_2181) from aquifex aeolicus vf5
5c4ap8A_



100.0 29
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin synthase catalytic subunit;
PDBTitle: crystal structure of human molybdopterin synthase catalytic subunit2 (mocs2b)
6d1fm0e_



100.0 28
Fold:alpha/beta-Hammerhead
Superfamily:Molybdopterin synthase subunit MoaE
Family:Molybdopterin synthase subunit MoaE
7c3rpfB_



100.0 17
PDB header:transferase
Chain: B: PDB Molecule:molybdopterin synthase catalytic subunit;
PDBTitle: protein-protein complex of subunit 1 and 2 of molybdopterin-converting2 factor from helicobacter pylori 26695
8c2wp4A_



100.0 38
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin-converting factor subunit 2 1;
PDBTitle: crystal structure of rv3119 from mycobacterium tuberculosis
9d1nvja_



100.0 26
Fold:alpha/beta-Hammerhead
Superfamily:Molybdopterin synthase subunit MoaE
Family:Molybdopterin synthase subunit MoaE
10c1v8cA_



98.9 19
PDB header:protein binding
Chain: A: PDB Molecule:moad related protein;
PDBTitle: crystal structure of moad related protein from thermus2 thermophilus hb8
11c3upsA_



76.4 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:iojap-like protein;
PDBTitle: crystal structure of iojap-like protein from zymomonas mobilis
12d1sq1a_



56.8 14
Fold:Chorismate synthase, AroC
Superfamily:Chorismate synthase, AroC
Family:Chorismate synthase, AroC
13c4wcwB_



54.3 15
PDB header:translation
Chain: B: PDB Molecule:ribosomal silencing factor rsfs;
PDBTitle: ribosomal silencing factor during starvation or stationary phase2 (rsfs) from mycobacterium tuberculosis
14d2o5aa1



50.7 14
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Iojap/YbeB-like
15d2id1a1



50.3 16
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Iojap/YbeB-like
16c4gzvH_



45.2 18
PDB header:structural genomics, unknown function
Chain: H: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a lipocalin family protein (bacova_00364) from2 bacteroides ovatus atcc 8483 at 1.95 a resolution
17c1zcoA_



25.0 17
PDB header:lyase
Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase;
PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase
18c5oomu_



23.7 15
PDB header:ribosome
Chain: U: PDB Molecule:39s ribosomal protein l23, mitochondrial;
PDBTitle: structure of a native assembly intermediate of the human mitochondrial2 ribosome with unfolded interfacial rrna
19c2k8eA_



21.9 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0339 protein yegp;
PDBTitle: solution nmr structure of protein of unknown function yegp from e.2 coli. ontario center for structural proteomics target ec0640_1_1233 northeast structural genomics consortium target et102.
20c2k49A_



21.7 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0339 protein so_3888;
PDBTitle: solution nmr structure of upf0339 protein so3888 from shewanella2 oneidensis. northeast structural genomics consortium target sor190
21c2z4tA_



not modelled 18.0 19
PDB header:transferase
Chain: A: PDB Molecule:beta-galactoside alpha-2,6-sialyltransferase;
PDBTitle: crystal structure of vibrionaceae photobacterium sp. jt-ish-224 2,6-2 sialyltransferase in a ternary complex with donor product cmp and3 accepter substrate lactose
22d1m5q1_



not modelled 15.9 13
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
23c3lvmB_



not modelled 15.9 9
PDB header:transferase
Chain: B: PDB Molecule:cysteine desulfurase;
PDBTitle: crystal structure of e.coli iscs
24c4e5sC_



not modelled 15.7 12
PDB header:hydrolase
Chain: C: PDB Molecule:mccflike protein (ba_5613);
PDBTitle: crystal structure of mccflike protein (ba_5613) from bacillus2 anthracis str. ames
25d1xmba2



not modelled 15.0 19
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
26c5usrG_



not modelled 14.7 19
PDB header:transferase
Chain: G: PDB Molecule:cysteine desulfurase, mitochondrial;
PDBTitle: crystal structure of human nfs1-isd11 in complex with e. coli acyl-2 carrier protein at 3.09 angstroms
27d2dy1a5



not modelled 14.1 23
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
28c5intB_



not modelled 14.0 19
PDB header:ligase
Chain: B: PDB Molecule:phosphopantothenate--cysteine ligase;
PDBTitle: crystal structure of the c-terminal domain of coenzyme a biosynthesis2 bifunctional protein coabc
29d1uwda_



not modelled 13.3 14
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
30d1p3wa_



not modelled 13.1 9
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Cystathionine synthase-like
31d2gnoa1



not modelled 12.8 17
Fold:post-AAA+ oligomerization domain-like
Superfamily:post-AAA+ oligomerization domain-like
Family:DNA polymerase III clamp loader subunits, C-terminal domain
32c4qjiB_



not modelled 12.7 19
PDB header:ligase
Chain: B: PDB Molecule:phosphopantothenate--cysteine ligase;
PDBTitle: crystal structure of the c-terminal ctp-binding domain of a2 phosphopantothenoylcysteine decarboxylase/phosphopantothenate-3 cysteine ligase with bound ctp from mycobacterium smegmatis
33c5z9aB_



not modelled 12.4 13
PDB header:lyase
Chain: B: PDB Molecule:chorismate synthase;
PDBTitle: crystal structure of chorismate synthase from pseudomonas aeruginosa
34d2k49a2



not modelled 11.4 12
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
35c4h1hB_



not modelled 11.3 14
PDB header:hydrolase
Chain: B: PDB Molecule:lmo1638 protein;
PDBTitle: crystal structure of mccf homolog from listeria monocytogenes egd-e
36c4ikcA_



not modelled 11.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:phosphotidylinositol phosphatase ptprq;
PDBTitle: crystal structure of catalytic domain of ptprq
37c3tlgB_



not modelled 10.6 21
PDB header:hydrolase
Chain: B: PDB Molecule:mccf;
PDBTitle: microcin c7 self immunity protein mccf in the inactive mutant apo2 state
38c3e7wA_



not modelled 10.6 12
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: crystal structure of dlta: implications for the reaction mechanism of2 non-ribosomal peptide synthetase (nrps) adenylation domains
39c3d8dA_



not modelled 10.5 14
PDB header:protein binding
Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member
PDBTitle: crystal structure of the human fe65-ptb1 domain
40c1zrsB_



not modelled 10.4 13
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: wild-type ld-carboxypeptidase
41d1udsa2



not modelled 10.1 16
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
42c3gjzB_



not modelled 10.1 6
PDB header:immune system
Chain: B: PDB Molecule:microcin immunity protein mccf;
PDBTitle: crystal structure of microcin immunity protein mccf from bacillus2 anthracis str. ames
43c5vevB_



not modelled 10.0 15
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from neisseria2 gonorrhoeae
44c3okqA_



not modelled 9.7 30
PDB header:protein binding
Chain: A: PDB Molecule:bud site selection protein 6;
PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6
45c5usrC_



not modelled 9.6 18
PDB header:transferase
Chain: C: PDB Molecule:cysteine desulfurase, mitochondrial;
PDBTitle: crystal structure of human nfs1-isd11 in complex with e. coli acyl-2 carrier protein at 3.09 angstroms
46c2kouA_



not modelled 9.4 13
PDB header:hydrolase
Chain: A: PDB Molecule:dicer-like protein 4;
PDBTitle: dicer like protein
47d2od6a1



not modelled 9.4 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Marine metagenome family DABB1
48d2burb1



not modelled 9.4 21
Fold:Prealbumin-like
Superfamily:Aromatic compound dioxygenase
Family:Aromatic compound dioxygenase
49c2xd4A_



not modelled 9.1 13
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
50c1tmxA_



not modelled 8.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:hydroxyquinol 1,2-dioxygenase;
PDBTitle: crystal structure of hydroxyquinol 1,2-dioxygenase from nocardioides2 simplex 3e
51c2boyC_



not modelled 8.8 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase;
PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from rhodococcus2 opacus 1cp
52c6q2zB_



not modelled 8.7 20
PDB header:unknown function
Chain: B: PDB Molecule:upf0339 family protein;
PDBTitle: nmr solution structure of the hvo_2922 protein from haloferax volcanii
53c2b9kA_



not modelled 8.7 25
PDB header:antibiotic
Chain: A: PDB Molecule:antimicrobial peptide lci;
PDBTitle: solution structure of lci, an amp from bacillus subtilis
54d1rpma_



not modelled 8.6 14
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
55d2acya_



not modelled 7.9 10
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
56d2dkya1



not modelled 7.6 33
Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:Variant SAM domain
57c4ra6A_



not modelled 7.6 24
PDB header:hydrolase
Chain: A: PDB Molecule:l-asparaginase;
PDBTitle: crystal structure of linker less pyrococcus furiosus l-asparaginase
58d2k8ea1



not modelled 7.6 7
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
59c5irdA_



not modelled 7.5 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of rv1466 from mycobacterium tuberculosis, a2 protein associated with [fe-s] complex assembly and repair - seattle3 structural genomics center for infectious disease target4 mytud.17486.a
60d1n0ua5



not modelled 7.5 16
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
61d2k49a1



not modelled 7.4 0
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
62d3bida1



not modelled 7.3 27
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
63d2k8ea2



not modelled 7.2 13
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
64c3th1C_



not modelled 7.0 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:chlorocatechol 1,2-dioxygenase;
PDBTitle: crystal structure of chlorocatechol 1,2-dioxygenase from pseudomonas2 putida
65c2n73B_



not modelled 6.6 31
PDB header:transferase/transferase regulator
Chain: B: PDB Molecule:phosphatidylinositol 4-kinase beta;
PDBTitle: solution structure of the acbd3:pi4kb complex
66c2bijA_



not modelled 6.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type 5;
PDBTitle: crystal structure of the human protein tyrosine phosphatase ptpn52 (step, striatum enriched enriched phosphatase)
67d1larb1



not modelled 6.5 21
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
68d2qn6b1



not modelled 6.5 10
Fold:Ferredoxin-like
Superfamily:eIF-2-alpha, C-terminal domain
Family:eIF-2-alpha, C-terminal domain
69c2c7sA_



not modelled 6.5 10
PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase kappa;
PDBTitle: crystal structure of human protein tyrosine phosphatase kappa at 1.95a2 resolution
70c2qdmA_



not modelled 6.3 24
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 7;
PDBTitle: crystal structure of the heptp catalytic domain c270s/d236a/q314a2 mutant
71c3degC_



not modelled 6.2 33
PDB header:ribosome
Chain: C: PDB Molecule:gtp-binding protein lepa;
PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
72d2k7ia1



not modelled 5.8 27
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
73c2k7iB_



not modelled 5.8 27
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:upf0339 protein atu0232;
PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223.
74c2h04A_



not modelled 5.8 14
PDB header:hydrolase
Chain: A: PDB Molecule:protein tyrosine phosphatase, receptor type, b,;
PDBTitle: structural studies of protein tyrosine phosphatase beta catalytic2 domain in complex with inhibitors
75c3jrlA_



not modelled 5.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:oncogenic tyrosine phosphatase shp2;
PDBTitle: crystal structure of the oncogenic tyrosine phosphatase shp2 complexed2 with a salicylic acid-based small molecule inhibitor
76d2h80a1



not modelled 5.7 21
Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:Variant SAM domain
77c4bnqA_



not modelled 5.6 32
PDB header:hydrolase
Chain: A: PDB Molecule:non-canonical purine ntp pyrophosphatase;
PDBTitle: the structure of the staphylococcus aureus ham1 protein
78c4ilvB_



not modelled 5.5 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:intradiol ring-cleavage dioxygenase;
PDBTitle: structure of the dioxygenase domain of sacte_2871, a novel dioxygenase2 carbohydrate-binding protein fusion from the cellulolytic bacterium3 streptomyces sp. sirexaa-e
79d1jb3a_



not modelled 5.5 25
Fold:OB-fold
Superfamily:TIMP-like
Family:The laminin-binding domain of agrin
80c2i75A_



not modelled 5.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 4;
PDBTitle: crystal structure of human protein tyrosine phosphatase n4 (ptpn4)
81c3cb4D_



not modelled 5.4 26
PDB header:translation
Chain: D: PDB Molecule:gtp-binding protein lepa;
PDBTitle: the crystal structure of lepa
82d2auna2



not modelled 5.3 11
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:LD-carboxypeptidase A N-terminal domain-like
83d1yfoa_



not modelled 5.2 19
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
84d1u7za_



not modelled 5.2 24
Fold:Ribokinase-like
Superfamily:CoaB-like
Family:CoaB-like
85c4czdD_



not modelled 5.2 15
PDB header:lyase
Chain: D: PDB Molecule:putative transcriptional regulator, asnc family;
PDBTitle: sirohaem decarboxylase ahba/b - an enzyme with structural homology2 to the lrp/asnc transcription factor family that is part of the3 alternative haem biosynthesis pathway.
86c2w2rA_



not modelled 5.2 23
PDB header:viral protein
Chain: A: PDB Molecule:matrix protein;
PDBTitle: structure of the vesicular stomatitis virus matrix protein
87c4d56A_



not modelled 5.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:apnaa1;
PDBTitle: understanding bi-specificity of a-domains
88c3eplA_



not modelled 5.1 10
PDB header:transferase/rna
Chain: A: PDB Molecule:trna isopentenyltransferase;
PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism
89d2cu6a1



not modelled 5.0 19
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite