Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0874c_(-)_972549_973709
DateFri Jul 26 01:50:46 BST 2019
Unique Job IDd1f0b9c9690a2f37
SequenceVRIGVGVCTT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.538 Y:43.213 Z:56.794
Model (left) based on template c1zfjA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
Confidence and coverage
Confidence: 71.3% Coverage: 43%
165 residues ( 43% of your sequence) have been modelled with 71.3% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1zfjA_



71.3 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
2d1rq2a2



56.6 14
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
3d2vapa2



55.9 19
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
4d1w5fa2



52.0 21
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
5c2zauB_



49.1 15
PDB header:transferase
Chain: B: PDB Molecule:selenide, water dikinase;
PDBTitle: crystal structure of an n-terminally truncated2 selenophosphate synthetase from aquifex aeolicus
6c4ldaF_



46.1 6
PDB header:transcription
Chain: F: PDB Molecule:tadz;
PDBTitle: crystal structure of a chey-like protein (tadz) from pseudomonas2 aeruginosa pao1 at 2.70 a resolution
7c2ayxA_



45.9 14
PDB header:transferase
Chain: A: PDB Molecule:sensor kinase protein rcsc;
PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
8c3b2nA_



42.5 10
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein q99uf4;
PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus
9c1ny5A_



37.9 8
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
10c6ifhA_



36.8 15
PDB header:transferase
Chain: A: PDB Molecule:sporulation initiation phosphotransferase f;
PDBTitle: unphosphorylated spo0f from paenisporosarcina sp. tg-14
11c4r3uD_



36.5 6
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
12c4z87B_



35.8 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: structure of the imp dehydrogenase from ashbya gossypii bound to gdp
13c5uicA_



34.9 13
PDB header:transcription
Chain: A: PDB Molecule:two-component response regulator;
PDBTitle: structure of the francisella response regulator receiver domain, qseb
14c5ep0A_



32.0 18
PDB header:transcription
Chain: A: PDB Molecule:putative repressor protein luxo;
PDBTitle: quorum-sensing signal integrator luxo - receiver+catalytic domains
15c5lwkB_



30.7 16
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulatory protein;
PDBTitle: maer response regulator bound to beryllium trifluoride
16d1ys7a2



30.0 19
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
17c3hv2B_



27.9 18
PDB header:signaling protein
Chain: B: PDB Molecule:response regulator/hd domain protein;
PDBTitle: crystal structure of signal receiver domain of hd domain-containing2 protein from pseudomonas fluorescens pf-5
18d1g2oa_



27.8 33
Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
19c3cu5B_



27.5 8
PDB header:transcription regulator
Chain: B: PDB Molecule:two component transcriptional regulator, arac family;
PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg
20d1peya_



27.2 20
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
21c4rndB_



not modelled 26.7 10
PDB header:hydrolase
Chain: B: PDB Molecule:v-type proton atpase subunit f;
PDBTitle: crystal structure of the subunit df-assembly of the eukaryotic v-2 atpase.
22c3dzdA_



not modelled 26.2 8
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
23d2zoda1



not modelled 26.0 10
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
24c4e7pA_



not modelled 25.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:response regulator;
PDBTitle: crystal structure of receiver domain of putative narl family response2 regulator spr1814 from streptococcus pneumoniae in the presence of3 the phosphoryl analog beryllofluoride
25c6ekhY_



not modelled 25.7 20
PDB header:metal binding protein
Chain: Y: PDB Molecule:chemotaxis protein chey;
PDBTitle: crystal structure of activated chey from methanoccocus maripaludis
26c3rqiA_



not modelled 25.5 8
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein;
PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate
27d1dbfa_



not modelled 24.8 15
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
28c3eulB_



not modelled 24.8 24
PDB header:transcription
Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional
PDBTitle: structure of the signal receiver domain of the putative response2 regulator narl from mycobacterium tuberculosis
29c2rjnA_



not modelled 24.5 16
PDB header:hydrolase
Chain: A: PDB Molecule:response regulator receiver:metal-dependent
PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
30c1y80A_



not modelled 23.6 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
31c4qpjC_



not modelled 23.6 10
PDB header:signaling protein/dna binding protein
Chain: C: PDB Molecule:cell cycle response regulator ctra;
PDBTitle: 2.7 angstrom structure of a phosphotransferase in complex with a2 receiver domain
32c2yxbA_



not modelled 23.4 8
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
33d1qe5a_



not modelled 23.1 26
Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
34d1u0sy_



not modelled 22.2 10
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
35c4k40B_



not modelled 21.6 14
PDB header:hydrolase
Chain: B: PDB Molecule:gdsl-like lipase/acylhydrolase family protein;
PDBTitle: peptidoglycan o-acetylesterase in action, 0 min
36d1ofua2



not modelled 20.8 16
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
37c5i4cA_



not modelled 20.6 4
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulatory protein rcsb;
PDBTitle: crystal structure of non-phosphorylated receiver domain of the stress2 response regulator rcsb from escherichia coli
38c4q7eA_



not modelled 20.6 18
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator of a two component regulatory system;
PDBTitle: non-phosphorylated hemr receiver domain from leptospira biflexa
39d1krwa_



not modelled 20.0 14
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
40c4s05B_



not modelled 20.0 24
PDB header:transcription/dna
Chain: B: PDB Molecule:dna-binding transcriptional regulator basr;
PDBTitle: crystal structure of klebsiella pneumoniae pmra in complex with pmra2 box dna
41c3u0oA_



not modelled 19.6 18
PDB header:transferase
Chain: A: PDB Molecule:selenide, water dikinase;
PDBTitle: the crystal structure of selenophosphate synthetase from e. coli
42d2zaua1



not modelled 19.4 15
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
43d1jbea_



not modelled 19.3 12
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
44d1b74a1



not modelled 19.0 12
Fold:ATC-like
Superfamily:Aspartate/glutamate racemase
Family:Aspartate/glutamate racemase
45d2e7ya1



not modelled 18.2 4
Fold:Metallo-hydrolase/oxidoreductase
Superfamily:Metallo-hydrolase/oxidoreductase
Family:RNase Z-like
46c3w9sB_



not modelled 18.2 24
PDB header:signaling protein/antimicrobial protein
Chain: B: PDB Molecule:ompr family response regulator in two-component regulatory
PDBTitle: crystal structure analysis of the n-terminal receiver domain of2 response regulator pmra
47d3c9ua1



not modelled 18.0 12
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
48d1ny5a1



not modelled 17.8 8
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
49c5wlpA_



not modelled 17.8 13
PDB header:protein transport
Chain: A: PDB Molecule:autophagy-related protein 32;
PDBTitle: solution structure of the pseudo-receiver domain of atg32
50d1ufya_



not modelled 16.9 23
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
51c6grgD_



not modelled 15.8 8
PDB header:biosynthetic protein
Chain: D: PDB Molecule:microcin b17-processing protein mcbd;
PDBTitle: e. coli microcin synthetase mcbbcd complex with pro-mccb17, adp and2 phosphate bound
52c1ys7B_



not modelled 15.5 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulatory protein prra;
PDBTitle: crystal structure of the response regulator protein prra complexed2 with mg2+
53c1w59B_



not modelled 15.5 17
PDB header:cell division
Chain: B: PDB Molecule:cell division protein ftsz homolog 1;
PDBTitle: ftsz dimer, empty (m. jannaschii)
54d1kgsa2



not modelled 15.2 10
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
55d1vk3a2



not modelled 14.6 9
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
56c5mg5P_



not modelled 14.6 23
PDB header:transferase
Chain: P: PDB Molecule:hydroxymethylglutaryl-coa synthase;
PDBTitle: a multi-component acyltransferase phlabc from pseudomonas protegens2 soaked with the monoacetylphloroglucinol (mapg)
57c3kcnA_



not modelled 14.2 8
PDB header:lyase
Chain: A: PDB Molecule:adenylate cyclase homolog;
PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica
58c2x3eA_



not modelled 13.9 17
PDB header:transferase
Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3;
PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein) synthase iii,2 fabh from pseudomonas aeruginosa pao1
59d1dbwa_



not modelled 13.8 6
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
60c2vxyA_



not modelled 13.5 16
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: the structure of ftsz from bacillus subtilis at 1.7a2 resolution
61c5l16A_



not modelled 13.4 13
PDB header:transferase
Chain: A: PDB Molecule:putative selenophosphate synthetase;
PDBTitle: crystal structure of n-terminus truncated selenophosphate synthetase2 from leishmania major
62c6m8oA_



not modelled 13.4 14
PDB header:signaling protein
Chain: A: PDB Molecule:dna-binding response regulator;
PDBTitle: crystal structure of the receiver domain of lytr from staphylococcus2 aureus
63c3cz5B_



not modelled 13.3 14
PDB header:transcription regulator
Chain: B: PDB Molecule:two-component response regulator, luxr family;
PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
64d1s0aa_



not modelled 13.2 27
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
65d1xpma1



not modelled 13.2 9
Fold:Thiolase-like
Superfamily:Thiolase-like
Family:Chalcone synthase-like
66d1mvoa_



not modelled 13.1 27
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
67c2wztA_



not modelled 12.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldo-keto reductase;
PDBTitle: crystal structure of a mycobacterium aldo-keto reductase in its apo2 and liganded form
68c3wrbB_



not modelled 12.8 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:gallate dioxygenase;
PDBTitle: crystal structure of the anaerobic h124f desb-gallate complex
69c2zwmA_



not modelled 12.7 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein yycf;
PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis
70c1u24A_



not modelled 12.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:myo-inositol hexaphosphate phosphohydrolase;
PDBTitle: crystal structure of selenomonas ruminantium phytase
71d1yioa2



not modelled 12.3 14
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
72d1qh8a_



not modelled 12.2 18
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
73c3s3lB_



not modelled 12.0 15
PDB header:transferase
Chain: B: PDB Molecule:cerj;
PDBTitle: crystal structure of cerj from streptomyces tendae
74c1zxuA_



not modelled 11.9 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:at5g01750 protein;
PDBTitle: x-ray structure of protein from arabidopsis thaliana at5g01750
75d2q4ma1



not modelled 11.9 15
Fold:Tubby C-terminal domain-like
Superfamily:Tubby C-terminal domain-like
Family:At5g01750-like
76c5iejA_



not modelled 11.9 13
PDB header:protein
Chain: A: PDB Molecule:sdrg;
PDBTitle: solution structure of the bef3-activated conformation of sdrg from2 pseudomonas melonis fr1
77c5lhaC_



not modelled 11.8 23
PDB header:transferase
Chain: C: PDB Molecule:omega transaminase;
PDBTitle: amine transaminase crystal structure from an uncultivated pseudomonas2 species in the pmp-bound form
78c2qr3A_



not modelled 11.8 16
PDB header:transcription
Chain: A: PDB Molecule:two-component system response regulator;
PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis
79c3jteA_



not modelled 11.6 8
PDB header:protein binding
Chain: A: PDB Molecule:response regulator receiver protein;
PDBTitle: crystal structure of response regulator receiver domain protein from2 clostridium thermocellum
80c6erkB_



not modelled 11.4 27
PDB header:transferase
Chain: B: PDB Molecule:aminotransferase;
PDBTitle: crystal structure of diaminopelargonic acid aminotransferase from2 psychrobacter cryohalolentis
81c3snkA_



not modelled 11.3 8
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator chey-like protein;
PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution
82d2uube2



not modelled 11.3 30
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Ribosomal S5 protein, N-terminal domain
83d1qh8b_



not modelled 11.0 9
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
84c2ynmC_



not modelled 10.9 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
85c2qv0A_



not modelled 10.8 14
PDB header:transcription
Chain: A: PDB Molecule:protein mrke;
PDBTitle: crystal structure of the response regulatory domain of protein mrke2 from klebsiella pneumoniae
86d2pl1a1



not modelled 10.8 14
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
87c3crnA_



not modelled 10.8 14
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like;
PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
88d1pkpa2



not modelled 10.6 22
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Ribosomal S5 protein, N-terminal domain
89c3fd5B_



not modelled 10.6 18
PDB header:transferase
Chain: B: PDB Molecule:selenide, water dikinase 1;
PDBTitle: crystal structure of human selenophosphate synthetase 12 complex with ampcp
90d1ccwa_



not modelled 10.4 2
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
91c5n6yD_



not modelled 10.2 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitrogenase vanadium-iron protein alpha chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
92c3nhzA_



not modelled 10.2 19
PDB header:dna binding protein
Chain: A: PDB Molecule:two component system transcriptional regulator mtra;
PDBTitle: structure of n-terminal domain of mtra
93c3t6kB_



not modelled 10.2 14
PDB header:signaling protein
Chain: B: PDB Molecule:response regulator receiver;
PDBTitle: crystal structure of a putative response regulator (caur_3799) from2 chloroflexus aurantiacus j-10-fl at 1.86 a resolution
94c2yxzA_



not modelled 10.1 12
PDB header:transferase
Chain: A: PDB Molecule:thiamin-monophosphate kinase;
PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8
95c6cboB_



not modelled 10.0 30
PDB header:transferase
Chain: B: PDB Molecule:c-6' aminotransferase;
PDBTitle: x-ray structure of genb1 from micromonospora echinospora in complex2 with neamine and plp (as the external aldimine)
96c2jrlA_



not modelled 10.0 8
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
97d1m1nb_



not modelled 10.0 7
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
98d1xhoa_



not modelled 9.9 8
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
99c1xhoB_



not modelled 9.9 8
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:chorismate mutase;
PDBTitle: chorismate mutase from clostridium thermocellum cth-682

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