Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0879c_(-)_978484_978759
DateFri Jul 26 01:50:47 BST 2019
Unique Job IDaf54d2d351d93a8a
SequenceMSVENSQIRE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:13.443 Y:22.055 Z:50.152
Model (left) based on template c6adqC_
Top template information
PDB header:electron transport
Chain: C: PDB Molecule:cytochrome bc1 complex cytochrome c subunit;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
Confidence and coverage
Confidence: 21.6% Coverage: 43%
39 residues ( 43% of your sequence) have been modelled with 21.6% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6adqC_



21.6 23
PDB header:electron transport
Chain: C: PDB Molecule:cytochrome bc1 complex cytochrome c subunit;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
2c2ktoA_



18.7 27
PDB header:antibiotic
Chain: A: PDB Molecule:lchb;
PDBTitle: spatial structure of lch-beta peptide from two-component lantibiotic2 lichenicidin vk21
3c2kluA_



11.7 31
PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
4c5f5vC_



9.3 50
PDB header:splicing
Chain: C: PDB Molecule:zinc finger domain-containing protein;
PDBTitle: crystal structure of the snu23-prp38-mfap1(217-296) complex of2 chaetomium thermophilum
5c5f5vF_



9.3 50
PDB header:splicing
Chain: F: PDB Molecule:zinc finger domain-containing protein;
PDBTitle: crystal structure of the snu23-prp38-mfap1(217-296) complex of2 chaetomium thermophilum
6d1uaza_



8.0 15
Fold:Family A G protein-coupled receptor-like
Superfamily:Family A G protein-coupled receptor-like
Family:Bacteriorhodopsin-like
7c2lr1B_



7.9 50
PDB header:apoptosis/signaling protein
Chain: B: PDB Molecule:immediate early glycoprotein;
PDBTitle: structural mechanism for bax inhibition by cytomegalovirus protein2 vmia
8c2lowA_



7.9 13
PDB header:membrane protein
Chain: A: PDB Molecule:apelin receptor;
PDBTitle: solution structure of ar55 in 50% hfip
9c6f2wA_



7.6 11
PDB header:transport protein
Chain: A: PDB Molecule:putative amino acid/polyamine transport protein;
PDBTitle: bacterial asc transporter crystal structure in open to in conformation
10c4iu8A_



7.5 6
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
11c3echC_



7.3 63
PDB header:transcription, transcription regulation
Chain: C: PDB Molecule:25-mer fragment of protein armr;
PDBTitle: the marr-family repressor mexr in complex with its antirepressor armr
12c5d6sB_



7.3 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:epoxyqueuosine reductase;
PDBTitle: structure of epoxyqueuosine reductase from streptococcus thermophilus.
13c4ikyA_



7.2 18
PDB header:transport protein
Chain: A: PDB Molecule:di-tripeptide abc transporter (permease);
PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate
14c2ifoA_



7.1 21
PDB header:virus
Chain: A: PDB Molecule:inovirus;
PDBTitle: model-building studies of inovirus: genetic variations on a2 geometric theme
15c2ww9B_



7.1 36
PDB header:ribosome
Chain: B: PDB Molecule:protein transport protein sss1;
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the yeast2 80s ribosome
16d1q90d_



6.7 29
Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
17c4hyjB_



6.6 27
PDB header:proton transport
Chain: B: PDB Molecule:rhodopsin;
PDBTitle: crystal structure of exiguobacterium sibiricum rhodopsin
18c2h3oA_



5.7 33
PDB header:membrane protein
Chain: A: PDB Molecule:merf;
PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices
19c4iu9A_



5.7 6
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter
20c6gyhA_



5.7 11
PDB header:proton transport
Chain: A: PDB Molecule:family a g protein-coupled receptor-like protein;
PDBTitle: crystal structure of the light-driven proton pump coccomyxa2 subellipsoidea rhodopsin csr
21c1wazA_



not modelled 5.3 33
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: nmr structure determination of the bacterial mercury transporter,2 merf, in micelles
22c6hu9e_



not modelled 5.2 17
PDB header:oxidoreductase/electron transport
Chain: E: PDB Molecule:cytochrome b-c1 complex subunit rieske, mitochondrial;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below