Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0909_(-)_1014685_1014864
DateFri Jul 26 01:50:50 BST 2019
Unique Job ID33263c134f36c49b
SequenceMGILDKVKNL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:23.454 Y:14.930 Z:20.038
Model (left) based on template c5uoiA_
Top template information
PDB header:de novo protein
Chain: A: PDB Molecule:hhh_rd1_0142;
PDBTitle: solution structure of the de novo mini protein hhh_rd1_0142
Confidence and coverage
Confidence: 36.2% Coverage: 41%
24 residues ( 41% of your sequence) have been modelled with 36.2% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5uoiA_



36.2 21
PDB header:de novo protein
Chain: A: PDB Molecule:hhh_rd1_0142;
PDBTitle: solution structure of the de novo mini protein hhh_rd1_0142
2d1vmaa1



23.3 25
Fold:Four-helical up-and-down bundle
Superfamily:Domain of the SRP/SRP receptor G-proteins
Family:Domain of the SRP/SRP receptor G-proteins
3c2jttD_



22.3 29
PDB header:calcium binding protein/antitumor protei
Chain: D: PDB Molecule:calcyclin-binding protein;
PDBTitle: solution structure of calcium loaded s100a6 bound to c-2 terminal siah-1 interacting protein
4c1ezeA_



19.1 39
PDB header:transferase inhibitor
Chain: A: PDB Molecule:cholesteryl ester transferase inhibitor protein;
PDBTitle: structural studies of a baboon (papio sp.) plasma protein2 inhibitor of cholesteryl ester transferase.
5c2jttC_



18.1 29
PDB header:calcium binding protein/antitumor protei
Chain: C: PDB Molecule:calcyclin-binding protein;
PDBTitle: solution structure of calcium loaded s100a6 bound to c-2 terminal siah-1 interacting protein
6c2jsaA_



11.9 9
PDB header:antimicrobial protein
Chain: A: PDB Molecule:saposin-like protein family protein 5;
PDBTitle: solution structure of caenopore-5 (81 pro trans confomer)
7c1yycA_



11.5 40
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative late embryogenesis abundant protein;
PDBTitle: solution structure of a putative late embryogenesis2 abundant (lea) protein at2g46140.1
8c2g9lA_



10.1 42
PDB header:antibiotic
Chain: A: PDB Molecule:gaegurin-4;
PDBTitle: the high-resolution solution conformation of an2 antimicrobial peptide gaegurin 4 and its mode of membrane3 interaction
9c2o7hF_



8.6 50
PDB header:transcription
Chain: F: PDB Molecule:general control protein gcn4;
PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper
10d2cc6a1



8.2 20
Fold:Dodecin subunit-like
Superfamily:Dodecin-like
Family:Dodecin-like
11c5t76A_



8.1 13
PDB header:translation
Chain: A: PDB Molecule:alanine--trna ligase, cytoplasmic;
PDBTitle: a fragment of a human trna synthetase
12c2vy8A_



7.6 22
PDB header:transcription
Chain: A: PDB Molecule:polymerase basic protein 2;
PDBTitle: the 627-domain from influenza a virus polymerase pb22 subunit with glu-627
13c1ij3C_



7.4 43
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
14c1ij3B_



7.4 43
PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
15c3onrI_



7.3 19
PDB header:metal binding protein
Chain: I: PDB Molecule:protein transport protein sece2;
PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site
16c1ij2C_



7.2 43
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
17c1swiA_



7.2 43
PDB header:leucine zipper
Chain: A: PDB Molecule:gcn4p1;
PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with benzene
18c3k7zB_



7.2 43
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
19c1rb1A_



7.2 43
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
20c3k7zA_



7.2 43
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
21c1rb6C_



not modelled 7.2 43
PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as n16a2 tetragonal form
22c1rb1B_



not modelled 7.2 43
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
23d1ryka_



not modelled 6.8 15
Fold:SAM domain-like
Superfamily:Hypothetical protein YjbJ
Family:Hypothetical protein YjbJ
24c1ij2B_



not modelled 6.8 43
PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
25c2mqkA_



not modelled 6.7 5
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent target dna activator b;
PDBTitle: solution structure of n terminal domain of the mub aaa+ atpase
26d2yrka1



not modelled 6.5 12
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
27c2vxaL_



not modelled 6.2 31
PDB header:flavoprotein
Chain: L: PDB Molecule:dodecin;
PDBTitle: h.halophila dodecin in complex with riboflavin
28d2g7ja1



not modelled 5.9 43
Fold:Secretion chaperone-like
Superfamily:YgaC/TfoX-N like
Family:YgaC-like
29c1iojA_



not modelled 5.3 33
PDB header:apolipoprotein
Chain: A: PDB Molecule:apoc-i;
PDBTitle: human apolipoprotein c-i, nmr, 18 structures
30c1ld4E_



not modelled 5.3 58
PDB header:virus
Chain: E: PDB Molecule:general control protein gcn4;
PDBTitle: placement of the structural proteins in sindbis virus

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