Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0929_(pstC2)_1036032_1037006
DateFri Jul 26 01:50:52 BST 2019
Unique Job ID6fa6d6c17d1f8aac
SequenceVVTEPLTKPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.445 Y:73.752 Z:63.529
Model (left) based on template c3fh6F_
Top template information
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
Confidence and coverage
Confidence:100.0% Coverage: 91%
296 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3fh6F_



100.0 12
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
2c4tqvI_



100.0 13
PDB header:transport protein
Chain: I: PDB Molecule:algm1;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
3c2r6gF_



100.0 15
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter
4d2r6gf2



100.0 13
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
5c4tqvJ_



100.0 14
PDB header:transport protein
Chain: J: PDB Molecule:algm2;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
6d2r6gg1



100.0 14
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
7c2onkC_



100.0 19
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda
8d2onkc1



100.0 19
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
9d3d31c1



100.0 15
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
10c3d31D_



100.0 15
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans
11c4ymuC_



100.0 16
PDB header:protein binding/transport protein
Chain: C: PDB Molecule:abc-type amino acid transport system, permease component;
PDBTitle: crystal structure of an amino acid abc transporter complex with2 arginines and atps
12d3dhwa1



99.9 23
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
13c5kbuA_



58.8 27
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2,voltage-dependent calcium channel
PDBTitle: cryo-em structure of glua2-2xstz complex at 7.8 angstrom resolution
14c2m8gX_



28.1 23
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
15c1umqA_



22.1 13
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
16d1umqa_



22.1 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
17c6gcs6_



18.5 9
PDB header:oxidoreductase
Chain: 6: PDB Molecule:nd6 subunit (nu6m);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
18c4l5eA_



18.1 13
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
19d1ntca_



17.7 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
20c2momB_



14.8 18
PDB header:membrane protein
Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
21c2momC_



not modelled 14.8 18
PDB header:membrane protein
Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
22c3wg7T_



not modelled 14.7 12
PDB header:oxidoreductase
Chain: T: PDB Molecule:cytochrome c oxidase subunit 6a2, mitochondrial;
PDBTitle: a 1.9 angstrom radiation damage free x-ray structure of large (420kda)2 protein by femtosecond crystallography
23d1v54g_



not modelled 14.1 12
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIa
Family:Mitochondrial cytochrome c oxidase subunit VIa
24c2hx6A_



not modelled 12.2 27
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease;
PDBTitle: solution structure analysis of the phage t42 endoribonuclease regb
25d1fipa_



not modelled 11.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
26d1etob_



not modelled 11.5 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
27d1etxa_



not modelled 9.8 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
28c4qiwT_



not modelled 8.8 29
PDB header:transcription
Chain: T: PDB Molecule:dna-directed rna polymerase subunit k;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
29c3e7lD_



not modelled 8.7 16
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
30c1twcF_



not modelled 8.0 29
PDB header:transcription
Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23
PDBTitle: rna polymerase ii complexed with gtp
31d1twff_



not modelled 7.9 29
Fold:RPB6/omega subunit-like
Superfamily:RPB6/omega subunit-like
Family:RPB6
32c2pmzW_



not modelled 7.7 21
PDB header:translation, transferase
Chain: W: PDB Molecule:dna-directed rna polymerase subunit k;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
33c1g2hA_



not modelled 6.6 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
34d1g2ha_



not modelled 6.6 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
35d1qkla_



not modelled 6.5 29
Fold:RPB6/omega subunit-like
Superfamily:RPB6/omega subunit-like
Family:RPB6
36c4xnwC_



not modelled 5.7 8
PDB header:transport protein
Chain: C: PDB Molecule:p2y purinoceptor 1,rubredoxin,p2y purinoceptor 1;
PDBTitle: the human p2y1 receptor in complex with mrs2500
37d1cf7a_



not modelled 5.5 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Cell cycle transcription factor e2f-dp
38c6hwhB_



not modelled 5.5 18
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
39c3h0gF_



not modelled 5.4 29
PDB header:transcription
Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii subunit rpabc2;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
40d2ns0a1



not modelled 5.2 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:RHA1 ro06458-like
41c1pyuD_



not modelled 5.1 23
PDB header:lyase
Chain: D: PDB Molecule:aspartate 1-decarboxylase alfa chain;
PDBTitle: processed aspartate decarboxylase mutant with ser25 mutated to cys

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below