Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0936_(pstA2)_1044321_1045226
DateFri Jul 26 01:50:53 BST 2019
Unique Job IDe0c297881acf681d
SequenceMGESAESGSR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:77.678 Y:46.309 Z:71.250
Model (left) based on template c4tqvI_
Top template information
PDB header:transport protein
Chain: I: PDB Molecule:algm1;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
Confidence and coverage
Confidence:100.0% Coverage: 89%
267 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4tqvI_



100.0 12
PDB header:transport protein
Chain: I: PDB Molecule:algm1;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
2c3fh6F_



100.0 11
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
3c2r6gF_



100.0 13
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter
4c4tqvJ_



100.0 9
PDB header:transport protein
Chain: J: PDB Molecule:algm2;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
5d2r6gf2



100.0 13
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
6c2onkC_



100.0 17
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda
7d2onkc1



100.0 17
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
8d2r6gg1



100.0 13
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
9c4ymuC_



100.0 17
PDB header:protein binding/transport protein
Chain: C: PDB Molecule:abc-type amino acid transport system, permease component;
PDBTitle: crystal structure of an amino acid abc transporter complex with2 arginines and atps
10c3d31D_



100.0 18
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans
11d3d31c1



100.0 18
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
12d3dhwa1



99.9 23
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
13d2r6gf1



50.4 8
Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
14c5kbuA_



38.2 17
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2,voltage-dependent calcium channel
PDBTitle: cryo-em structure of glua2-2xstz complex at 7.8 angstrom resolution
15c2m8gX_



32.4 23
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
16d1umqa_



28.4 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
17c1umqA_



28.4 13
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
18c2hx6A_



28.4 31
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease;
PDBTitle: solution structure analysis of the phage t42 endoribonuclease regb
19d1ntca_



27.7 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
20c4l5eA_



25.6 22
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
21c2jpwA_



not modelled 24.1 39
PDB header:contractile protein
Chain: A: PDB Molecule:troponin i, cardiac muscle;
PDBTitle: solution structure of the bisphosphorylated cardiac2 specific n-extension of cardiac troponin i
22d1fipa_



not modelled 18.8 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
23d1etob_



not modelled 18.0 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
24c3e7lD_



not modelled 14.8 26
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
25d1etxa_



not modelled 13.8 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
26c6e59A_



not modelled 11.3 10
PDB header:signaling protein
Chain: A: PDB Molecule:substance-p receptor, glga glycogen synthase, substance-p
PDBTitle: crystal structure of the human nk1 tachykinin receptor
27c1g2hA_



not modelled 10.2 27
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
28d1g2ha_



not modelled 10.2 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
29c2momB_



not modelled 9.2 21
PDB header:membrane protein
Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
30c2momC_



not modelled 9.2 21
PDB header:membrane protein
Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
31c2n2aA_



not modelled 9.2 17
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains
32c4qiwT_



not modelled 9.0 29
PDB header:transcription
Chain: T: PDB Molecule:dna-directed rna polymerase subunit k;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
33c2ks1A_



not modelled 8.4 19
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
34c2jwaA_



not modelled 8.4 19
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
35c2wwbA_



not modelled 7.9 17
PDB header:ribosome
Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1;
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the actively2 translating wheat germ 80s ribosome
36c2l2tA_



not modelled 7.9 7
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: solution nmr structure of the erbb4 dimeric membrane domain
37c2lcxB_



not modelled 7.9 7
PDB header:transferase
Chain: B: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: spatial structure of the erbb4 dimeric tm domain
38c1twcF_



not modelled 7.7 36
PDB header:transcription
Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23
PDBTitle: rna polymerase ii complexed with gtp
39c3mkuA_



not modelled 7.7 11
PDB header:transport protein
Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug
PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter
40d1twff_



not modelled 7.6 36
Fold:RPB6/omega subunit-like
Superfamily:RPB6/omega subunit-like
Family:RPB6
41c2wwaA_



not modelled 7.5 17
PDB header:ribosome
Chain: A: PDB Molecule:sec sixty-one protein homolog;
PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the yeast 80s2 ribosome
42c2pmzW_



not modelled 7.4 21
PDB header:translation, transferase
Chain: W: PDB Molecule:dna-directed rna polymerase subunit k;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
43d1j8ca_



not modelled 7.0 27
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
44c3twfB_



not modelled 6.5 11
PDB header:unknown function
Chain: B: PDB Molecule:alpha4f3a;
PDBTitle: crystal structure of the de novo designed fluorinated peptide2 alpha4f3a
45c5ws4A_



not modelled 6.4 10
PDB header:membrane protein
Chain: A: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: crystal structure of tripartite-type abc transporter macb from2 acinetobacter baumannii
46c5a40C_



not modelled 6.2 10
PDB header:transport protein
Chain: C: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
47d1qkla_



not modelled 6.2 36
Fold:RPB6/omega subunit-like
Superfamily:RPB6/omega subunit-like
Family:RPB6
48c2m20B_



not modelled 6.1 20
PDB header:signaling protein
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: egfr transmembrane - juxtamembrane (tm-jm) segment in bicelles: md2 guided nmr refined structure.
49c1ojlD_



not modelled 6.1 29
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
50c5m7nA_



not modelled 6.0 16
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
51c1wlpA_



not modelled 5.9 45
PDB header:oxidoreductase/signaling protein
Chain: A: PDB Molecule:cytochrome b-245 light chain;
PDBTitle: solution structure of the p22phox-p47phox complex
52c3h0gF_



not modelled 5.3 36
PDB header:transcription
Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii subunit rpabc2;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below