Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0978c_(PE_PGRS17)_1093365_1094360
DateWed Jul 31 22:05:04 BST 2019
Unique Job ID47f0fa10badb8207
SequenceMSFVNVAPQL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.987 Y:45.051 Z:30.021
Model (left) based on template c1qniE_
Top template information
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitrous-oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from pseudomonas nautica,2 at 2.4a resolution
Confidence and coverage
Confidence: 99.8% Coverage: 35%
115 residues ( 35% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1qniE_
99.8 21
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitrous-oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from pseudomonas nautica,2 at 2.4a resolution
2c1fwxB_
99.8 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrous oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans
3c3s8vA_
99.8 14
PDB header:signaling protein
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: crystal structure of lrp6-dkk1 complex
4d1qnia2
99.7 17
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
5c3bwsA_
99.7 26
PDB header:unknown function
Chain: A: PDB Molecule:protein lp49;
PDBTitle: crystal structure of the leptospiral antigen lp49
6c3s94A_
99.7 13
PDB header:signaling protein
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: crystal structure of lrp6-e1e2
7c5i5iA_
99.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitrous-oxide reductase;
PDBTitle: shewanella denitrificans nitrous oxide reductase, app form
8c6gc1A_
99.7 22
PDB header:unknown function
Chain: A: PDB Molecule:nhl repeat-containing protein 2;
PDBTitle: crystal structure of trx-like and nhl repeat containing domains of2 human nhlrc2
9c5f30B_
99.7 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:thiocyanate dehydrogenase;
PDBTitle: thiocyanate dehydrogenase from thioalkalivibrio paradoxus
10c3sbrF_
99.7 10
PDB header:oxidoreductase
Chain: F: PDB Molecule:nitrous-oxide reductase;
PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate
11c3u4yA_
99.7 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein (dtox_1751)2 from desulfotomaculum acetoxidans dsm 771.
12c6f0qB_
99.7 53
PDB header:de novo protein
Chain: B: PDB Molecule:pizza6-ayw;
PDBTitle: crystal structure of pizza6-ayw
13d1fwxa2
99.6 12
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
14c2iwkB_
99.6 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrous oxide reductase;
PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution
15c3hrpA_
99.6 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution
16c4hw6D_
99.6 17
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein, ipt/tig domain protein;
PDBTitle: crystal structure of an auxiliary nutrient binding protein2 (bacova_00264) from bacteroides ovatus atcc 8483 at 1.70 a resolution
17c1n7dA_
99.6 22
PDB header:lipid transport
Chain: A: PDB Molecule:low-density lipoprotein receptor;
PDBTitle: extracellular domain of the ldl receptor
18c1l0qC_
99.6 44
PDB header:protein binding
Chain: C: PDB Molecule:surface layer protein;
PDBTitle: tandem yvtn beta-propeller and pkd domains from an archaeal surface2 layer protein
19c2iwaA_
99.6 12
PDB header:transferase
Chain: A: PDB Molecule:glutamine cyclotransferase;
PDBTitle: unbound glutaminyl cyclotransferase from carica papaya.
20c1gq1B_
99.6 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase;
PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised form
21d1jofa_
not modelled 99.6 20
Fold:7-bladed beta-propeller
Superfamily:3-carboxy-cis,cis-mucoante lactonizing enzyme
Family:3-carboxy-cis,cis-mucoante lactonizing enzyme
22c3kyaA_
not modelled 99.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative phosphatase;
PDBTitle: crystal structure of putative phosphatase (np_812416.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.77 a resolution
23c3vh0C_
not modelled 99.5 16
PDB header:protein binding/dna
Chain: C: PDB Molecule:uncharacterized protein ynce;
PDBTitle: crystal structure of e. coli ynce complexed with dna
24c3nolA_
not modelled 99.5 11
PDB header:transferase
Chain: A: PDB Molecule:glutamine cyclotransferase;
PDBTitle: crystal structure of zymomonas mobilis glutaminyl cyclase (trigonal2 form)
25c2z2pA_
not modelled 99.5 9
PDB header:lyase/antibiotic
Chain: A: PDB Molecule:virginiamycin b lyase;
PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin
26c3mbrX_
not modelled 99.5 11
PDB header:transferase
Chain: X: PDB Molecule:glutamine cyclotransferase;
PDBTitle: crystal structure of the glutaminyl cyclase from xanthomonas2 campestris
27d2p4oa1
not modelled 99.5 13
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:All0351-like
28c6fayA_
not modelled 99.5 17
PDB header:cell adhesion
Chain: A: PDB Molecule:odz3 protein;
PDBTitle: teneurin3 monomer
29d2g38a1
not modelled 99.5 26
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
30c2g38A_
not modelled 99.5 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
31c6fb3A_
not modelled 99.5 14
PDB header:cell adhesion
Chain: A: PDB Molecule:teneurin-2;
PDBTitle: teneurin 2 partial extracellular domain
32c6rteB_
not modelled 99.5 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c;
PDBTitle: dihydro-heme d1 dehydrogenase nirn in complex with dhe
33c5xfsA_
not modelled 99.5 43
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
34c1nnoA_
not modelled 99.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitrite reductase;
PDBTitle: conformational changes occurring upon no binding in nitrite reductase2 from pseudomonas aeruginosa
35d1jmxb_
not modelled 99.5 23
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
36c3fw0A_
not modelled 99.5 27
PDB header:lyase
Chain: A: PDB Molecule:peptidyl-glycine alpha-amidating monooxygenase;
PDBTitle: structure of peptidyl-alpha-hydroxyglycine alpha-amidating2 lyase (pal) bound to alpha-hydroxyhippuric acid (non-3 peptidic substrate)
37d1qksa2
not modelled 99.4 15
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
38d1pjxa_
not modelled 99.4 19
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
39d1l0qa2
not modelled 99.4 44
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:YVTN repeat
40c5c2vB_
not modelled 99.4 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:hydrazine synthase beta subunit;
PDBTitle: kuenenia stuttgartiensis hydrazine synthase
41c3hfqB_
not modelled 99.4 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein lp_2219;
PDBTitle: crystal structure of the lp_2219 protein from lactobacillus plantarum.2 northeast structural genomics consortium target lpr118.
42c5d9bA_
not modelled 99.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:luciferin regenerating enzyme;
PDBTitle: luciferin-regenerating enzyme solved by siras using xfel (refined2 against native data)
43c2qc5A_
not modelled 99.4 11
PDB header:lyase
Chain: A: PDB Molecule:streptogramin b lactonase;
PDBTitle: streptogramin b lyase structure
44c3soqA_
not modelled 99.4 13
PDB header:protein binding/antagonist
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: the structure of the first ywtd beta propeller domain of lrp6 in2 complex with a dkk1 peptide
45c5tzsT_
not modelled 99.4 16
PDB header:translation
Chain: T: PDB Molecule:utp21;
PDBTitle: architecture of the yeast small subunit processome
46c2j57J_
not modelled 99.4 14
PDB header:oxidoreductase
Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain;
PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin.
47d1pbyb_
not modelled 99.4 19
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
48c2p9wA_
not modelled 99.3 21
PDB header:allergen
Chain: A: PDB Molecule:mal s 1 allergenic protein;
PDBTitle: crystal structure of the major malassezia sympodialis allergen mala s2 1
49c3g4hB_
not modelled 99.3 15
PDB header:hydrolase
Chain: B: PDB Molecule:regucalcin;
PDBTitle: crystal structure of human senescence marker protein-30 (zinc bound)
50c4qrjA_
not modelled 99.3 14
PDB header:hydrolase
Chain: A: PDB Molecule:putative 6-phosphogluconolactonase;
PDBTitle: crystal structure of a putative 6-phosphogluconolactonase2 (bacuni_04672) from bacteroides uniformis atcc 8492 at 2.20 a3 resolution
51c5i2tA_
not modelled 99.3 9
PDB header:biosynthetic protein
Chain: A: PDB Molecule:periodic tryptophan protein 2;
PDBTitle: domain characterization of the wd protein pwp2 and their relevance in2 ribosome biogenesis
52d1ri6a_
not modelled 99.3 17
Fold:7-bladed beta-propeller
Superfamily:Putative isomerase YbhE
Family:Putative isomerase YbhE
53c3fgbB_
not modelled 99.3 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn;
PDBTitle: crystal structure of the q89zh8_bactn protein from bacteroides2 thetaiotaomicron. northeast structural genomics consortium target3 btr289b.
54c3tc9B_
not modelled 99.3 14
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical hydrolase;
PDBTitle: crystal structure of an auxiliary nutrient binding protein (bt_3476)2 from bacteroides thetaiotaomicron vpi-5482 at 2.23 a resolution
55d2ghsa1
not modelled 99.3 16
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
56c2ghsA_
not modelled 99.3 16
PDB header:calcium-binding protein
Chain: A: PDB Molecule:agr_c_1268p;
PDBTitle: crystal structure of a calcium-binding protein, regucalcin2 (agr_c_1268) from agrobacterium tumefaciens str. c58 at 1.55 a3 resolution
57c3dsmA_
not modelled 99.3 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bacuni_02894;
PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d.
58c2i0tB_
not modelled 99.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:aromatic amine dehydrogenase;
PDBTitle: crystal structure of phenylacetaldehyde derived r-2 carbinolamine adduct of aromatic amine dehydrogenase
59c2h47F_
not modelled 99.3 17
PDB header:oxidoreductase/electron transport
Chain: F: PDB Molecule:aromatic amine dehydrogenase;
PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1)
60d1ijqa1
not modelled 99.3 18
Fold:6-bladed beta-propeller
Superfamily:YWTD domain
Family:YWTD domain
61c3c75J_
not modelled 99.3 20
PDB header:oxidoreductase
Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain;
PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin
62c4nsxA_
not modelled 99.3 16
PDB header:protein binding
Chain: A: PDB Molecule:u3 small nucleolar rna-associated protein 21;
PDBTitle: crystal structure of the utp21 tandem wd domain
63d1npea_
not modelled 99.3 18
Fold:6-bladed beta-propeller
Superfamily:YWTD domain
Family:YWTD domain
64c3dr2A_
not modelled 99.3 9
PDB header:hydrolase
Chain: A: PDB Molecule:exported gluconolactonase;
PDBTitle: structural and functional analyses of xc5397 from2 xanthomonas campestris: a gluconolactonase important in3 glucose secondary metabolic pathways
65c2qe8B_
not modelled 99.3 11
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative hydrolase (ava_4197) from anabaena2 variabilis atcc 29413 at 1.35 a resolution
66d2dg1a1
not modelled 99.3 21
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
67d1v04a_
not modelled 99.3 20
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:Serum paraoxonase/arylesterase 1, PON1
68d1rwia_
not modelled 99.3 31
Fold:6-bladed beta-propeller
Superfamily:NHL repeat
Family:NHL repeat
69d1nira2
not modelled 99.3 12
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
70c6ck1C_
not modelled 99.3 16
PDB header:metal binding protein
Chain: C: PDB Molecule:a1b2f4 protein;
PDBTitle: crystal structure of paracoccus denitrificans aztd
71c6cmkB_
not modelled 99.3 14
PDB header:metal binding protein
Chain: B: PDB Molecule:aztd protein;
PDBTitle: crystal structure of citrobacter koseri aztd
72c5a1vL_
not modelled 99.2 16
PDB header:transport protein
Chain: L: PDB Molecule:coatomer subunit beta;
PDBTitle: the structure of the copi coat linkage i
73c6nd4T_
not modelled 99.2 16
PDB header:ribosome
Chain: T: PDB Molecule:utp21;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
74c6d69A_
not modelled 99.2 19
PDB header:protein binding
Chain: A: PDB Molecule:nhl repeat region of d. melanogaster thin;
PDBTitle: crystal structure of the nhl repeat region of d. melanogaster thin
75d2madh_
not modelled 99.2 11
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Methylamine dehydrogenase, H-chain
76c2fp8A_
not modelled 99.2 19
PDB header:lyase
Chain: A: PDB Molecule:strictosidine synthase;
PDBTitle: structure of strictosidine synthase, the biosynthetic entry to the2 monoterpenoid indole alkaloid family
77c6nd4O_
not modelled 99.2 8
PDB header:ribosome
Chain: O: PDB Molecule:utp1;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
78c5nzvC_
not modelled 99.2 17
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit beta';
PDBTitle: the structure of the copi coat linkage iv
79d2bbkh_
not modelled 99.2 24
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Methylamine dehydrogenase, H-chain
80c3iytG_
not modelled 99.2 8
PDB header:apoptosis
Chain: G: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: structure of an apoptosome-procaspase-9 card complex
81c5a1uC_
not modelled 99.2 12
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat triad
82c5a1vK_
not modelled 99.2 10
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
83c3mkqA_
not modelled 99.2 16
PDB header:transport protein
Chain: A: PDB Molecule:coatomer beta'-subunit;
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
84c3nokB_
not modelled 99.1 9
PDB header:transferase
Chain: B: PDB Molecule:glutaminyl cyclase;
PDBTitle: crystal structure of myxococcus xanthus glutaminyl cyclase
85c3qqzA_
not modelled 99.1 9
PDB header:metal binding protein
Chain: A: PDB Molecule:putative uncharacterized protein yjik;
PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073
86c2ymuA_
not modelled 99.1 19
PDB header:unknown function
Chain: A: PDB Molecule:wd-40 repeat protein;
PDBTitle: structure of a highly repetitive propeller structure
87d1q7fa_
not modelled 99.1 15
Fold:6-bladed beta-propeller
Superfamily:NHL repeat
Family:NHL repeat
88c3e5zA_
not modelled 99.1 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative gluconolactonase;
PDBTitle: x-ray structure of the putative gluconolactonase in protein family2 pf08450. northeast structural genomics consortium target drr130.
89c6igbB_
not modelled 99.1 16
PDB header:hydrolase
Chain: B: PDB Molecule:periplasmic gluconolactonase, ppgl;
PDBTitle: the structure of pseudomonas aeruginosa periplasmic gluconolactonase,2 ppgl
90c5juyB_
not modelled 99.1 8
PDB header:apoptosis
Chain: B: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: active human apoptosome with procaspase-9
91c3dm0A_
not modelled 99.1 9
PDB header:sugar binding protein,signaling protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with rack1;
PDBTitle: maltose binding protein fusion with rack1 from a. thaliana
92c1ijqA_
not modelled 99.1 22
PDB header:lipid transport
Chain: A: PDB Molecule:low-density lipoprotein receptor;
PDBTitle: crystal structure of the ldl receptor ywtd-egf domain pair
93c6nd4Q_
not modelled 99.1 10
PDB header:ribosome
Chain: Q: PDB Molecule:utp12;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
94c6fqlA_
not modelled 99.1 25
PDB header:rna binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase trim71;
PDBTitle: crystal structure of danio rerio lin41 filamin-nhl domains in complex2 with mab-10 3'utr 13mer rna
95c4wjsA_
not modelled 99.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rsa4;
PDBTitle: crystal structure of rsa4 from chaetomium thermophilum
96d1crua_
not modelled 99.0 19
Fold:6-bladed beta-propeller
Superfamily:Soluble quinoprotein glucose dehydrogenase
Family:Soluble quinoprotein glucose dehydrogenase
97c4wjuB_
not modelled 99.0 15
PDB header:biosynthetic protein
Chain: B: PDB Molecule:ribosome assembly protein 4;
PDBTitle: crystal structure of rsa4 from saccharomyces cerevisiae
98c1nr0A_
not modelled 99.0 13
PDB header:structural protein
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1).
99c5thaA_
not modelled 99.0 15
PDB header:rna binding protein
Chain: A: PDB Molecule:gem-associated protein 5;
PDBTitle: gemin5 wd40 repeats in complex with a guanosyl moiety
100c5cvoD_
not modelled 99.0 9
PDB header:hydrolase/protein binding
Chain: D: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
101c2oajA_
not modelled 99.0 13
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:protein sni1;
PDBTitle: crystal structure of sro7 from s. cerevisiae
102d1ospo_
not modelled 99.0 6
Fold:open-sided beta-meander
Superfamily:Outer surface protein
Family:Outer surface protein
103c5ch2A_
not modelled 99.0 13
PDB header:transferase
Chain: A: PDB Molecule:putative polycomb protein eed;
PDBTitle: crystal structure of an active polycomb repressive complex 2 in the2 basal state
104d1tl2a_
not modelled 98.9 14
Fold:5-bladed beta-propeller
Superfamily:Tachylectin-2
Family:Tachylectin-2
105c5cvoA_
not modelled 98.9 10
PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
106c3a9gA_
not modelled 98.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form
107c5a5uB_
not modelled 98.9 10
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of mammalian eif3 in the context of the 43s preinitiation2 complex
108c2w18A_
not modelled 98.8 14
PDB header:nuclear protein
Chain: A: PDB Molecule:partner and localizer of brca2;
PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2
109c5k1bB_
not modelled 98.8 10
PDB header:protein binding/hydrolase
Chain: B: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: crystal structure of the uaf1/usp12 complex in f222 space group
110c6nd4S_
not modelled 98.8 13
PDB header:ribosome
Chain: S: PDB Molecule:utp18;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
111c1n6dE_
not modelled 98.8 9
PDB header:hydrolase
Chain: E: PDB Molecule:tricorn protease;
PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative
112c1k32E_
not modelled 98.8 9
PDB header:hydrolase
Chain: E: PDB Molecule:tricorn protease;
PDBTitle: crystal structure of the tricorn protease
113c4yczA_
not modelled 98.8 12
PDB header:structural protein
Chain: A: PDB Molecule:fusion protein of sec13 and nup145c;
PDBTitle: y-complex hub (nup85-nup120-nup145c-sec13 complex) from m. thermophila2 (a.k.a. t. heterothallica)
114c4yhcA_
not modelled 98.8 12
PDB header:structural protein
Chain: A: PDB Molecule:sterol regulatory element-binding protein cleavage-
PDBTitle: crystal structure of the wd40 domain of scap from fission yeast
115c2aq5A_
not modelled 98.8 16
PDB header:structural protein
Chain: A: PDB Molecule:coronin-1a;
PDBTitle: crystal structure of murine coronin-1
116c1pi6A_
not modelled 98.8 10
PDB header:protein binding
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: yeast actin interacting protein 1 (aip1), orthorhombic crystal form
117c6nd4H_
not modelled 98.8 11
PDB header:ribosome
Chain: H: PDB Molecule:utp17;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
118c3j65q_
not modelled 98.7 15
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
119c5cvlA_
not modelled 98.7 10
PDB header:protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48 (uaf-1), residues 2-580
120c4xfvA_
not modelled 98.7 12
PDB header:translation
Chain: A: PDB Molecule:elongator complex protein 2;
PDBTitle: crystal structure of elp2

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below