Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0979A_(rpmF)_1094890_1095063
DateWed Jul 31 22:05:04 BST 2019
Unique Job ID8690e1105b2539a6
SequenceMAVPKRRKSR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.690 Y:49.406 Z:22.854
Model (left) based on template c5o60b_
Top template information
PDB header:ribosome
Chain: B: PDB Molecule:5s rrna;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
Confidence and coverage
Confidence:100.0% Coverage: 95%
54 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5o60b_



100.0 74
PDB header:ribosome
Chain: B: PDB Molecule:5s rrna;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
2c3j3v0_



97.8 30
PDB header:ribosome
Chain: 0: PDB Molecule:50s ribosomal protein l32;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
3d2j0151



97.5 24
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
4d2zjrz1



97.5 24
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
5d2qam01



97.4 30
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
6c3bbo2_



96.5 46
PDB header:ribosome
Chain: 2: PDB Molecule:ribosomal protein l32;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
7c4ce45_



96.3 32
PDB header:ribosome
Chain: 5: PDB Molecule:mrpl32;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
8c4v195_



95.7 30
PDB header:ribosome
Chain: 5: PDB Molecule:mitoribosomal protein bl32m, mrpl32;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
9c5mlc2_



80.8 45
PDB header:ribosome
Chain: 2: PDB Molecule:50s ribosomal protein l32, chloroplastic;
PDBTitle: cryo-em structure of the spinach chloroplast ribosome reveals the2 location of plastid-specific ribosomal proteins and extensions
10c1qfqB_



52.1 48
PDB header:transcription/rna
Chain: B: PDB Molecule:36-mer n-terminal peptide of the n protein;
PDBTitle: bacteriophage lambda n-protein-nutboxb-rna complex
11c5lm7F_



42.0 48
PDB header:transcription
Chain: F: PDB Molecule:antitermination protein n;
PDBTitle: crystal structure of the lambda n-nus factor complex
12c6c0fs_



38.7 31
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l20-a;
PDBTitle: yeast nucleolar pre-60s ribosomal subunit (state 2)
13c6govN_



37.1 48
PDB header:transcription
Chain: N: PDB Molecule:antitermination protein n;
PDBTitle: structure of the rna polymerase lambda-based antitermination complex
14c1vw4W_



20.9 27
PDB header:ribosome
Chain: W: PDB Molecule:54s ribosomal protein l32, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
15c2krhA_



13.7 38
PDB header:actin-binding protein
Chain: A: PDB Molecule:actin-binding rho-activating protein;
PDBTitle: structure of the c-terminal actin binding domain of abra
16c2jrtA_



12.9 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr solution structure of the protein coded by gene2 rhos4_12090 of rhodobacter sphaeroides. northeast3 structural genomics target rhr5
17c1jqsB_



12.7 50
PDB header:ribosome
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog
18c2l2oA_



12.0 23
PDB header:unknown function
Chain: A: PDB Molecule:upf0727 protein c6orf115;
PDBTitle: solution structure of human hspc280 protein
19c6jqsA_



10.9 38
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding response regulator;
PDBTitle: structure of transcription factor, gere
20d2oa4a1



10.5 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:SPO1678-like
21d1lm5a_



not modelled 6.9 43
Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Plakin repeat
Family:Plakin repeat
22c4fc9B_



not modelled 6.6 67
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the c-terminal domain of the type iii effector xcv32202 (xopl)
23c6cb1s_



not modelled 6.1 33
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l20-a;
PDBTitle: yeast nucleolar pre-60s ribosomal subunit (state 3)
24c5noaA_



not modelled 5.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:family 88 glycosyl hydrolase;
PDBTitle: polysaccharide lyase baccell_00875
25c2n03A_



not modelled 5.3 29
PDB header:structural protein
Chain: A: PDB Molecule:plectin;
PDBTitle: solution nmr structure plectin repeat domain 6 (4403-4606) of plectin2 from homo sapiens, northeast structural genomics consortium (nesg)3 target hr6354e

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