Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0990c_(-)_1107447_1108103
DateWed Jul 31 22:05:05 BST 2019
Unique Job ID41896c0f150b25c2
SequenceVAESSLNPSL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:30.719 Y:60.886 Z:33.384
Model (left) based on template c3teeA_
Top template information
PDB header:chaperone
Chain: A: PDB Molecule:flagella basal body p-ring formation protein flga;
PDBTitle: crystal structure of salmonella flga in open form
Confidence and coverage
Confidence: 99.4% Coverage: 38%
83 residues ( 38% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3teeA_
99.4 20
PDB header:chaperone
Chain: A: PDB Molecule:flagella basal body p-ring formation protein flga;
PDBTitle: crystal structure of salmonella flga in open form
2c3frnA_
99.2 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:flagellar protein flga;
PDBTitle: crystal structure of flagellar protein flga from thermotoga maritima2 msb8
3d2zdra1
98.0 20
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
4d1vlia1
97.8 6
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
5c1xuzA_
97.7 20
PDB header:biosynthetic protein
Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac;
PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
6c3g8rA_
97.4 19
PDB header:biosynthetic protein
Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e;
PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
7c1vliA_
97.4 8
PDB header:biosynthetic protein
Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse;
PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
8d1opsa_
96.6 27
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
9d1c8aa2
96.2 25
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
10c1wvoA_
95.7 20
PDB header:transferase
Chain: A: PDB Molecule:sialic acid synthase;
PDBTitle: solution structure of rsgi ruh-029, an antifreeze protein2 like domain in human n-acetylneuraminic acid phosphate3 synthase gene.
11d3nlaa_
95.7 25
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
12c1c8aA_
94.9 25
PDB header:antifreeze protein
Chain: A: PDB Molecule:protein (antifreeze protein type iii);
PDBTitle: nmr structure of intramolecular dimer antifreeze protein2 rd3, 40 sa structures
13c3upyB_
92.1 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of the brucella abortus enzyme catalyzing the first2 committed step of the methylerythritol 4-phosphate pathway.
14d1ucsa_
85.0 23
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
15d1hg7a_
81.6 25
Fold:beta-clip
Superfamily:AFP III-like domain
Family:AFP III-like domain
16c3k3sG_
72.0 21
PDB header:hydrolase
Chain: G: PDB Molecule:altronate hydrolase;
PDBTitle: crystal structure of altronate hydrolase (fragment 1-84) from shigella2 flexneri.
17c6chgC_
57.2 33
PDB header:transferase
Chain: C: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4 specific;
PDBTitle: crystal structure of the yeast compass catalytic module
18c5ht6B_
57.0 27
PDB header:transferase
Chain: B: PDB Molecule:histone-lysine n-methyltransferase 2e;
PDBTitle: crystal structure of the set domain of the human mll52 methyltransferase
19c4z4pA_
51.3 20
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase 2d;
PDBTitle: structure of the mll4 set domain
20d2g46a1
51.1 13
Fold:beta-clip
Superfamily:SET domain
Family:Viral histone H3 Lysine 27 Methyltransferase
21c3f9xA_
not modelled 50.9 27
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd8;
PDBTitle: structural insights into lysine multiple methylation by set domain2 methyltransferases, set8-y334f / h4-lys20me2 / adohcy
22d2f69a2
not modelled 49.0 13
Fold:beta-clip
Superfamily:SET domain
Family:Histone lysine methyltransferases
23c2w5zA_
not modelled 47.9 33
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase hrx;
PDBTitle: ternary complex of the mixed lineage leukaemia (mll1) set2 domain with the cofactor product s-adenosylhomocysteine3 and histone peptide.
24d1h3ia2
not modelled 44.2 13
Fold:beta-clip
Superfamily:SET domain
Family:Histone lysine methyltransferases
25c3opeA_
not modelled 42.9 40
PDB header:transferase
Chain: A: PDB Molecule:probable histone-lysine n-methyltransferase ash1l;
PDBTitle: structural basis of auto-inhibitory mechanism of histone2 methyltransferase
26c6bx3E_
not modelled 42.3 33
PDB header:gene regulation/transferase
Chain: E: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4 specific;
PDBTitle: structure of histone h3k4 methyltransferase
27c3h6lA_
not modelled 42.2 20
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd2;
PDBTitle: methyltransferase domain of human set domain-containing protein 2
28c6agoA_
not modelled 42.0 40
PDB header:transferase/gene regulation
Chain: A: PDB Molecule:histone-lysine n-methyltransferase ash1l;
PDBTitle: crystal structure of mrg15-ash1l histone methyltransferase complex
29c4o30B_
not modelled 41.7 33
PDB header:transferase
Chain: B: PDB Molecule:histone-lysine n-methyltransferase atxr6, putative;
PDBTitle: crystal structure of atxr5 in complex with histone h3.1 and adohcy
30c5h6zA_
not modelled 41.1 7
PDB header:transcription
Chain: A: PDB Molecule:set domain-containing protein 7;
PDBTitle: crystal structure of set7, a novel histone methyltransferase in2 schizossacharomyces pombe
31c4mi0A_
not modelled 39.6 20
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase ezh2;
PDBTitle: human enhancer of zeste (drosophila) homolog 2(ezh2)
32c4rz0B_
not modelled 39.5 13
PDB header:transferase
Chain: B: PDB Molecule:pfl0690c;
PDBTitle: crystal structure of plasmodium falciparum putative histone2 methyltransferase pfl0690c
33c3bo5A_
not modelled 39.0 33
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setmar;
PDBTitle: crystal structure of methyltransferase domain of human histone-lysine2 n-methyltransferase setmar
34c3ooiA_
not modelled 38.6 40
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-36 and h4
PDBTitle: crystal structure of human histone-lysine n-methyltransferase nsd1 set2 domain in complex with s-adenosyl-l-methionine
35c2r3aA_
not modelled 38.2 20
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv39h2;
PDBTitle: methyltransferase domain of human suppressor of variegation2 3-9 homolog 2
36d1ml9a_
not modelled 37.6 40
Fold:beta-clip
Superfamily:SET domain
Family:Histone lysine methyltransferases
37c3hnaA_
not modelled 36.1 13
PDB header:hydrolase/hydrolase regulator
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9 specific 5;
PDBTitle: crystal structure of catalytic domain of human euchromatic histone2 methyltransferase 1 in complex with sah and mono-methylated h3k93 peptide
38c2o8jC_
not modelled 34.4 27
PDB header:transferase
Chain: C: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9
PDBTitle: human euchromatic histone methyltransferase 2
39c1xqhE_
not modelled 34.3 13
PDB header:transferase
Chain: E: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4
PDBTitle: crystal structure of a ternary complex of the2 methyltransferase set9 (also known as set7/9) with a p533 peptide and sah
40c3n71A_
not modelled 31.5 8
PDB header:transcription
Chain: A: PDB Molecule:histone lysine methyltransferase smyd1;
PDBTitle: crystal structure of cardiac specific histone methyltransferase smyd1
41d1mvha_
not modelled 31.2 33
Fold:beta-clip
Superfamily:SET domain
Family:Histone lysine methyltransferases
42c1mvhA_
not modelled 31.2 33
PDB header:transferase
Chain: A: PDB Molecule:cryptic loci regulator 4;
PDBTitle: structure of the set domain histone lysine2 methyltransferase clr4
43c3lazB_
not modelled 31.1 7
PDB header:lyase
Chain: B: PDB Molecule:d-galactarate dehydratase;
PDBTitle: the crystal structure of the n-terminal domain of d-2 galactarate dehydratase from escherichia coli cft073
44c4ldgA_
not modelled 29.7 27
PDB header:unknown function
Chain: A: PDB Molecule:protein with a set domain within carboxy region;
PDBTitle: crystal structure of cpset8 from cryptosporidium, cgd4_370
45c2qpwA_
not modelled 28.8 20
PDB header:transcription
Chain: A: PDB Molecule:pr domain zinc finger protein 2;
PDBTitle: methyltransferase domain of human pr domain-containing2 protein 2
46c3s8pA_
not modelled 28.3 33
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv420h1;
PDBTitle: crystal structure of the set domain of human histone-lysine n-2 methyltransferase suv420h1 in complex with s-adenosyl-l-methionine
47c6a5mA_
not modelled 27.0 20
PDB header:gene regulation
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9 specific
PDBTitle: crystal structure of arabidopsis thaliana suvh6 in complex with sam,2 form 2
48c4ytlB_
not modelled 26.1 16
PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt5;
PDBTitle: structure of the kow2-kow3 domain of transcription elongation factor2 spt5.
49c3rayA_
not modelled 25.9 40
PDB header:transcription
Chain: A: PDB Molecule:pr domain-containing protein 11;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 11
50c3rq4A_
not modelled 25.7 33
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv420h2;
PDBTitle: crystal structure of suppressor of variegation 4-20 homolog 2
51c1h3iB_
not modelled 23.4 13
PDB header:transferase
Chain: B: PDB Molecule:histone h3 lysine 4 specific methyltransferase;
PDBTitle: crystal structure of the histone methyltransferase set7/9
52c4nj5A_
not modelled 23.1 33
PDB header:metal binding protein
Chain: A: PDB Molecule:probable histone-lysine n-methyltransferase, h3 lysine-9
PDBTitle: crystal structure of suvh9
53c3ep0A_
not modelled 22.1 21
PDB header:transferase
Chain: A: PDB Molecule:pr domain zinc finger protein 12;
PDBTitle: methyltransferase domain of human pr domain-containing2 protein 12
54c3qwvA_
not modelled 21.8 23
PDB header:transferase
Chain: A: PDB Molecule:set and mynd domain-containing protein 2;
PDBTitle: crystal structure of histone lysine methyltransferase smyd2 in complex2 with the cofactor product adohcy
55c3mekA_
not modelled 19.0 46
PDB header:transferase
Chain: A: PDB Molecule:set and mynd domain-containing protein 3;
PDBTitle: crystal structure of human histone-lysine n-methyltransferase smyd3 in2 complex with s-adenosyl-l-methionine
56d2h2ja2
not modelled 18.9 7
Fold:beta-clip
Superfamily:SET domain
Family:RuBisCo LSMT catalytic domain
57c6fndC_
not modelled 17.0 33
PDB header:transferase
Chain: C: PDB Molecule:apical complex lysine methyltransferase;
PDBTitle: crystal structure of toxoplasma gondii akmt
58c3oxgA_
not modelled 16.0 46
PDB header:transferase
Chain: A: PDB Molecule:set and mynd domain-containing protein 3;
PDBTitle: human lysine methyltransferase smyd3 in complex with adohcy (form iii)
59c1wzoC_
not modelled 15.9 23
PDB header:isomerase
Chain: C: PDB Molecule:hpce;
PDBTitle: crystal structure of the hpce from thermus thermophilus hb8
60d1nkqa_
not modelled 14.8 16
Fold:FAH
Superfamily:FAH
Family:FAH
61c4qeoA_
not modelled 14.3 40
PDB header:transcription/dna
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9 specific
PDBTitle: crystal structure of kryptonite in complex with mchh dna, h3(1-15)2 peptide and sah
62c4e5sC_
not modelled 14.1 27
PDB header:hydrolase
Chain: C: PDB Molecule:mccflike protein (ba_5613);
PDBTitle: crystal structure of mccflike protein (ba_5613) from bacillus2 anthracis str. ames
63d1gtta2
not modelled 14.1 20
Fold:FAH
Superfamily:FAH
Family:FAH
64c3db5A_
not modelled 13.8 23
PDB header:transferase
Chain: A: PDB Molecule:pr domain zinc finger protein 4;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 4
65c6jvwA_
not modelled 13.3 18
PDB header:hydrolase
Chain: A: PDB Molecule:maleylpyruvate hydrolase;
PDBTitle: crystal structure of maleylpyruvate hydrolase from sphingobium sp.2 syk-6 in complex with manganese (ii) ion and pyruvate
66d1sawa_
not modelled 12.4 12
Fold:FAH
Superfamily:FAH
Family:FAH
67d1hh2p1
not modelled 12.2 19
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
68c2hj1A_
not modelled 12.1 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae
69d2hj1a1
not modelled 12.1 20
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:HI0395-like
70c3gjzB_
not modelled 12.0 20
PDB header:immune system
Chain: B: PDB Molecule:microcin immunity protein mccf;
PDBTitle: crystal structure of microcin immunity protein mccf from bacillus2 anthracis str. ames
71c5zz5D_
not modelled 11.6 18
PDB header:gene regulation
Chain: D: PDB Molecule:redox-sensing transcriptional repressor rex;
PDBTitle: redox-sensing transcriptional repressor rex
72d2do3a1
not modelled 11.6 13
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:SPT5 KOW domain-like
73c6iymB_
not modelled 11.5 20
PDB header:hydrolase
Chain: B: PDB Molecule:5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase;
PDBTitle: fumarylacetoacetate hydrolase (eafah) from psychrophilic2 exiguobacterium antarcticum
74c5ij7B_
not modelled 11.4 20
PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:enhancer of zeste homolog 2 (ezh2),histone-lysine n-
PDBTitle: structure of hs/acprc2 in complex with a pyridone inhibitor
75c3qdfA_
not modelled 11.4 19
PDB header:isomerase
Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase;
PDBTitle: crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase2 from mycobacterium marinum
76c2l55A_
not modelled 11.3 13
PDB header:metal binding protein
Chain: A: PDB Molecule:silb,silver efflux protein, mfp component of the three
PDBTitle: solution structure of the c-terminal domain of silb from cupriavidus2 metallidurans
77c5f1yA_
not modelled 11.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:mccc family protein;
PDBTitle: crystal structure of ba3275, the member of s66 family of serine2 peptidases
78c3tlgB_
not modelled 10.7 27
PDB header:hydrolase
Chain: B: PDB Molecule:mccf;
PDBTitle: microcin c7 self immunity protein mccf in the inactive mutant apo2 state
79c4h1hB_
not modelled 10.5 18
PDB header:hydrolase
Chain: B: PDB Molecule:lmo1638 protein;
PDBTitle: crystal structure of mccf homolog from listeria monocytogenes egd-e
80d1e0ta3
not modelled 9.8 24
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
81c6f0kA_
not modelled 9.1 14
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
82c4maqB_
not modelled 9.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:putative fumarylpyruvate hydrolase;
PDBTitle: crystal structure of a putative fumarylpyruvate hydrolase from2 burkholderia cenocepacia
83c5wg6C_
not modelled 9.0 20
PDB header:transferase/transferase inhibitor
Chain: C: PDB Molecule:histone-lysine n-methyltransferase ezh2,polycomb protein
PDBTitle: human polycomb repressive complex 2 in complex with gsk126 inhibitor
84c3qxyA_
not modelled 8.6 31
PDB header:transferase
Chain: A: PDB Molecule:n-lysine methyltransferase setd6;
PDBTitle: human setd6 in complex with rela lys310
85c2e6zA_
not modelled 8.2 31
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt5;
PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
86c1zrsB_
not modelled 8.1 18
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: wild-type ld-carboxypeptidase
87c4dbhA_
not modelled 8.0 14
PDB header:isomerase
Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase;
PDBTitle: crystal structure of cg1458 with inhibitor
88d2g50a3
not modelled 7.8 16
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
89c1ri9A_
not modelled 7.5 19
PDB header:signaling protein
Chain: A: PDB Molecule:fyn-binding protein;
PDBTitle: structure of a helically extended sh3 domain of the t cell2 adapter protein adap
90d1ri9a_
not modelled 7.5 19
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
91c1p0yA_
not modelled 7.5 23
PDB header:transferase
Chain: A: PDB Molecule:ribulose-1,5 bisphosphate carboxylase/oxygenase
PDBTitle: crystal structure of the set domain of lsmt bound to2 melysine and adohcy
92d1hr0w_
not modelled 7.3 26
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
93c4hkrB_
not modelled 7.2 9
PDB header:transport protein
Chain: B: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai
94d1ah9a_
not modelled 6.9 32
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
95d2auna2
not modelled 6.8 12
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:LD-carboxypeptidase A N-terminal domain-like
96c6flqF_
not modelled 6.5 22
PDB header:transcription
Chain: F: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: cryoem structure of e.coli rna polymerase paused elongation complex2 bound to nusa
97c3zr6A_
not modelled 6.5 30
PDB header:hydrolase
Chain: A: PDB Molecule:galactocerebrosidase;
PDBTitle: structure of galactocerebrosidase from mouse in complex with galactose
98c4ql5A_
not modelled 6.4 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: crystal structure of translation initiation factor if-1 from2 streptococcus pneumoniae tigr4
99c3i4oA_
not modelled 6.1 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis

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Transmembrane helix prediction 

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