Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1038c_(esxJ)_1160859_1161155
DateWed Jul 31 22:05:11 BST 2019
Unique Job ID64c906b673bfce25
SequenceMASRFMTDPH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:27.262 Y:69.718 Z:19.563
Model (left) based on template c3ogiD_
Top template information
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative esat-6-like protein 7;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
Confidence and coverage
Confidence:100.0% Coverage: 76%
74 residues ( 76% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
98 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ogiD_



100.0 91
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative esat-6-like protein 7;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
2d1wa8a1



98.6 20
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
3c3zbhC_



97.9 20
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
4c3gvmA_



97.7 16
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
5c4lwsA_



97.6 22
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
6c4iogD_



97.6 24
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
7c2vs0B_



97.5 14
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
8d1wa8b1



96.6 10
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
9c4lwsB_



96.0 14
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
10c2kg7B_



95.5 21
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
11c3m0dC_



76.8 19
PDB header:signaling protein
Chain: C: PDB Molecule:tnf receptor-associated factor 1;
PDBTitle: crystal structure of the traf1:traf2:ciap2 complex
12c3m06F_



66.9 19
PDB header:protein binding
Chain: F: PDB Molecule:tnf receptor-associated factor 2;
PDBTitle: crystal structure of traf2
13c2dw3A_



51.6 38
PDB header:photosynthesis
Chain: A: PDB Molecule:intrinsic membrane protein pufx;
PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein
14c3bj4B_



30.4 44
PDB header:signaling protein
Chain: B: PDB Molecule:potassium voltage-gated channel subfamily kqt
PDBTitle: the kcnq1 (kv7.1) c-terminus, a multi-tiered scaffold for2 subunit assembly and protein interaction
15d1pqua2



27.3 54
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
16d1wtea_



26.1 42
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease EcoO109IR
17c3ag7A_



20.6 16
PDB header:plant protein
Chain: A: PDB Molecule:putative uncharacterized protein f9e10.5;
PDBTitle: an auxilin-like j-domain containing protein, jac1 j-domain
18d1mb4a2



20.0 54
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
19d1t4ba2



19.9 46
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
20d2gz1a2



19.7 46
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
21c2la2A_



not modelled 19.6 27
PDB header:antimicrobial protein
Chain: A: PDB Molecule:cecropin;
PDBTitle: solution structure of papiliocin isolated from the swallowtail2 butterfly, papilio xuthus
22c3gtzA_



not modelled 13.7 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative translation initiation inhibitor;
PDBTitle: crystal structure of a putative translation initiation inhibitor from2 salmonella typhimurium
23c2ym9D_



not modelled 12.7 23
PDB header:cell invasion
Chain: D: PDB Molecule:cell invasion protein sipd;
PDBTitle: sipd from salmonella typhimurium
24c5a3kA_



not modelled 11.3 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative pteridine-dependent dioxygenase;
PDBTitle: chorismatase mechanisms reveal fundamentally different types of2 reaction in a single conserved protein fold
25c1i8tB_



not modelled 10.8 40
PDB header:isomerase
Chain: B: PDB Molecule:udp-galactopyranose mutase;
PDBTitle: strcuture of udp-galactopyranose mutase from e.coli
26c3h6pD_



not modelled 9.9 30
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:esat-6-like protein esxr;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
27d2j01h1



not modelled 9.8 42
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
28d2zjre2



not modelled 9.5 45
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
29d2qamg1



not modelled 9.0 33
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
30d1vqoe1



not modelled 8.6 58
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
31c3l32B_



not modelled 8.3 35
PDB header:viral protein
Chain: B: PDB Molecule:phosphoprotein;
PDBTitle: structure of the dimerisation domain of the rabies virus2 phosphoprotein
32d1xbla_



not modelled 8.2 12
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
33c2vq7B_



not modelled 7.8 53
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavin-containing monooxygenase;
PDBTitle: bacterial flavin-containing monooxygenase in complex with2 nadp: native data
34c4m70A_



not modelled 7.8 39
PDB header:plant protein
Chain: A: PDB Molecule:rx protein;
PDBTitle: crystal structure of potato rx-cc domain in complex with rangap2-wpp2 domain
35c2bi8A_



not modelled 7.6 47
PDB header:isomerase
Chain: A: PDB Molecule:udp-galactopyranose mutase;
PDBTitle: udp-galactopyranose mutase from klebsiella pneumoniae with reduced fad
36d1w4xa1



not modelled 7.5 40
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
37c2dn9A_



not modelled 7.4 14
PDB header:apoptosis, chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily a member 3;
PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein
38c5nmwA_



not modelled 7.4 47
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin-containing monooxygenase;
PDBTitle: crystal structure of the pyrrolizidine alkaloid n-oxygenase from2 zonocerus variegatus in complex with fad
39c487dJ_



not modelled 7.2 42
PDB header:ribosome
Chain: J: PDB Molecule:protein (50s l6 ribosomal protein);
PDBTitle: seven ribosomal proteins fitted to a cryo-electron2 microscopic map of the large 50s subunit at 7.5 angstroms3 resolution
40c5j7xA_



not modelled 7.2 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:dimethylaniline monooxygenase, putative;
PDBTitle: baeyer-villiger monooxygenase bvmoafl838 from aspergillus flavus
41d2k49a2



not modelled 7.1 43
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
42c3we0A_



not modelled 7.0 47
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-amino acid oxidase/monooxygenase;
PDBTitle: l-amino acid oxidase/monooxygenase from pseudomonas sp. aiu 813
43d2hjsa2



not modelled 7.0 27
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
44d1rl6a1



not modelled 7.0 45
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
45d2k8ea1



not modelled 6.8 71
Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
46c1v0jB_



not modelled 6.6 27
PDB header:isomerase
Chain: B: PDB Molecule:udp-galactopyranose mutase;
PDBTitle: udp-galactopyranose mutase from mycobacterium tuberculosis
47d2cqla1



not modelled 6.6 45
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
48c4ap3A_



not modelled 6.3 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:steroid monooxygenase;
PDBTitle: oxidized steroid monooxygenase bound to nadp
49c3uoyB_



not modelled 6.2 33
PDB header:oxidoreductase
Chain: B: PDB Molecule:otemo;
PDBTitle: crystal structure of otemo complex with fad and nadp (form 1)
50d1jd1a_



not modelled 6.1 14
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
51c5gsnD_



not modelled 6.1 40
PDB header:flavoprotein
Chain: D: PDB Molecule:flavin-containing monooxygenase;
PDBTitle: tmm in complex with methimazole
52c3gwdA_



not modelled 6.1 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:cyclohexanone monooxygenase;
PDBTitle: closed crystal structure of cyclohexanone monooxygenase
53c4tlxC_



not modelled 6.0 27
PDB header:oxidoreductase
Chain: C: PDB Molecule:ktzi;
PDBTitle: kutzneria sp. 744 ornithine n-hydroxylase, ktzi-fadred-nadp+-l-orn
54c3nj2B_



not modelled 6.0 18
PDB header:unknown function
Chain: B: PDB Molecule:duf269-containing protein;
PDBTitle: crystal structure of cce_0566 from the cyanobacterium cyanothece2 51142, a protein associated with nitrogen fixation from the duf2693 family
55d2bi7a1



not modelled 5.9 47
Fold:Nucleotide-binding domain
Superfamily:Nucleotide-binding domain
Family:UDP-galactopyranose mutase, N-terminal domain
56c3zqbB_



not modelled 5.9 20
PDB header:cell invasion
Chain: B: PDB Molecule:protein prgi, cell invasion protein sipd;
PDBTitle: prgi-sipd from salmonella typhimurium
57c5o60G_



not modelled 5.9 42
PDB header:ribosome
Chain: G: PDB Molecule:50s ribosomal protein l6;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
58c2jb1B_



not modelled 5.8 33
PDB header:oxidoreductase
Chain: B: PDB Molecule:l-amino acid oxidase;
PDBTitle: the l-amino acid oxidase from rhodococcus opacus in complex2 with l-alanine
59c2i2vG_



not modelled 5.7 33
PDB header:ribosome
Chain: G: PDB Molecule:50s ribosomal protein l6;
PDBTitle: crystal structure of ribosome with messenger rna and the anticodon2 stem-loop of p-site trna. this file contains the 50s subunit of one3 70s ribosome. the entire crystal structure contains two 70s ribosomes4 and is described in remark 400.
60c3k0tA_



not modelled 5.5 11
PDB header:sugar binding protein
Chain: A: PDB Molecule:endoribonuclease l-psp, putative;
PDBTitle: crystal structure of pspto -psp protein in complex with d-beta-glucose2 from pseudomonas syringae pv. tomato str. dc3000
61c2ip6A_



not modelled 5.5 29
PDB header:antimicrobial protein
Chain: A: PDB Molecule:papb;
PDBTitle: crystal structure of pedb
62c5jwcA_



not modelled 5.3 38
PDB header:membrane protein
Chain: A: PDB Molecule:nadh dehydrogenase, putative;
PDBTitle: structure of ndh2 from plasmodium falciparum in complex with ryl-552
63c1vw4F_



not modelled 5.2 42
PDB header:ribosome
Chain: F: PDB Molecule:54s ribosomal protein l6, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
64c5o8rA_



not modelled 5.2 20
PDB header:biosynthetic protein
Chain: A: PDB Molecule:l-lysine 6-monooxygenase involved in desferrioxamine
PDBTitle: the crystal structure of dfoa bound to fad and nadp; the2 desferrioxamine biosynthetic pathway cadaverine monooxygenase from3 the fire blight disease pathogen erwinia amylovora
65c3kjjL_



not modelled 5.1 18
PDB header:unknown function
Chain: L: PDB Molecule:nmb1025 protein;
PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form)
66c2hguH_



not modelled 5.1 42
PDB header:ribosome
Chain: H: PDB Molecule:50s ribosomal protein l6;
PDBTitle: 70s t.th. ribosome functional complex with mrna and e- and p-site2 trnas at 4.5a. this entry 2hgu contains 50s ribosomal subunit. the3 30s ribosomal subunit can be found in pdb entry 2hgr.
67c6fe8D_



not modelled 5.0 42
PDB header:dna binding protein
Chain: D: PDB Molecule:centromere dna-binding protein complex cbf3 subunit c;
PDBTitle: cryo-em structure of the core centromere binding factor 3 complex

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