Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1039c_(PPE15)_1161301_1162476
DateWed Jul 31 22:05:11 BST 2019
Unique Job ID6447f71383864137
SequenceMDFGALPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.297 Y:71.054 Z:69.918
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 44%
173 residues ( 44% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 54% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 100
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 31
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 31
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 17
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.8 17
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.9 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.7 10
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.7 11
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.5 18
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.8 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.4 17
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
94.5 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
94.4 20
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
93.2 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
88.2 18
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
63.0 20
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c5frgA_
17.5 75
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
18d1ui5a2
17.4 24
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
19c1bkvA_
16.8 56
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
20c1bkvC_
16.0 56
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
21c1bkvB_
not modelled 16.0 56
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
22c2ke4A_
not modelled 10.3 75
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
23c1vytF_
not modelled 7.1 50
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
24c4xb6D_
not modelled 7.0 20
PDB header:transferase
Chain: D: PDB Molecule:alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase;
PDBTitle: structure of the e. coli c-p lyase core complex
25c4gyxC_
not modelled 6.9 45
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
26c2iu1A_
not modelled 6.7 22
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
27c4dmtC_
not modelled 6.7 38
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
28c4dmtB_
not modelled 6.7 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
29c4dmtA_
not modelled 6.7 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
30c4gyxA_
not modelled 6.6 45
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
31c4gyxB_
not modelled 6.6 45
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
32d1fcda3
not modelled 6.4 31
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
33c2fulE_
not modelled 6.1 33
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
34c2kg7A_
not modelled 6.0 35
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
35c1vytE_
not modelled 5.7 50
PDB header:transport protein
Chain: E: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
36c2lkqA_
not modelled 5.6 56
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
37c2y5tG_
not modelled 5.6 67
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
38c6q5lA_
not modelled 5.5 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
39c6q5lB_
not modelled 5.5 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
40c6q5hA_
not modelled 5.5 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24d;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24d
41c6q5mB_
not modelled 5.4 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
42c6q5iB_
not modelled 5.4 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24e
43c6q5kA_
not modelled 5.4 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24k;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24k
44d1zeea1
not modelled 5.4 33
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
45c4lzxB_
not modelled 5.3 38
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
46c6q5mA_
not modelled 5.3 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
47c5uc0B_
not modelled 5.3 60
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
48c2y5tE_
not modelled 5.3 67
PDB header:immune system
Chain: E: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
49c6q5jE_
not modelled 5.1 23
PDB header:de novo protein
Chain: E: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24e
50c3r47J_
not modelled 5.1 23
PDB header:de novo protein
Chain: J: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
51c3r47B_
not modelled 5.1 23
PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
52c3r47I_
not modelled 5.1 23
PDB header:de novo protein
Chain: I: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
53c5l85B_
not modelled 5.1 18
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
54c4dexB_
not modelled 5.1 38
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav2.2 i-ii linker.
55c6aokA_
not modelled 5.1 38
PDB header:hydrolase
Chain: A: PDB Molecule:ceg4;
PDBTitle: crystal structure of legionella pneumophila effector ceg4 with n-2 terminal tev protease cleavage sequence
56c6q5jF_
not modelled 5.1 23
PDB header:de novo protein
Chain: F: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24e

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below