Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1052_(-)_1175728_1176117
DateWed Jul 31 22:05:12 BST 2019
Unique Job ID44471d4e32449842
SequenceMDCCEERGVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.831 Y:25.359 Z:27.896
Model (left) based on template c3nw0B_
Top template information
PDB header:metal binding protein
Chain: B: PDB Molecule:melanoma-associated antigen g1;
PDBTitle: crystal structure of mageg1 and nse1 complex
Confidence and coverage
Confidence: 23.0% Coverage: 37%
48 residues ( 37% of your sequence) have been modelled with 23.0% confidence by the single highest scoring template.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3nw0B_



23.0 33
PDB header:metal binding protein
Chain: B: PDB Molecule:melanoma-associated antigen g1;
PDBTitle: crystal structure of mageg1 and nse1 complex
2c1dmeA_



21.7 57
PDB header:metallothionein
Chain: A: PDB Molecule:cd6 metallothionein-1;
PDBTitle: the three-dimensional solution structure of callinectes2 sapidus metallothionein-i determined by homonuclear and3 heteronuclear magnetic resonance spectoscopy
3c1dmfA_



20.7 57
PDB header:metallothionein
Chain: A: PDB Molecule:cd6 metallothionein-1;
PDBTitle: the three-dimensional solution structure of callinectes2 sapidus metallothionein-i determined by homonuclear and3 heteronuclear magnetic resonance spectoscopy
4c2wa0A_



20.3 19
PDB header:immune system
Chain: A: PDB Molecule:melanoma-associated antigen 4;
PDBTitle: crystal structure of the human magea4
5c6c62D_



19.6 41
PDB header:hydrolase
Chain: D: PDB Molecule:atzg;
PDBTitle: an unexpected vestigial protein complex reveals the evolutionary2 origins of an s-triazine catabolic enzyme.
6c1xdyC_



17.4 75
PDB header:oxidoreductase
Chain: C: PDB Molecule:bacterial sulfite oxidase;
PDBTitle: structural and biochemical identification of a novel2 bacterial oxidoreductase, w-containing cofactor
7d1xdya_



17.3 100
Fold:Oxidoreductase molybdopterin-binding domain
Superfamily:Oxidoreductase molybdopterin-binding domain
Family:Oxidoreductase molybdopterin-binding domain
8d1jmab2



15.6 58
Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:TNF receptor-like
9c3ulxA_



13.1 24
PDB header:dna binding protein
Chain: A: PDB Molecule:stress-induced transcription factor nac1;
PDBTitle: crystal structural of the conserved domain of rice stress-responsive2 nac1
10c6dmxE_



12.7 52
PDB header:transcription
Chain: E: PDB Molecule:bzip factor;
PDBTitle: hbz56 in complex with kix and c-myb
11c6mzlS_



12.1 30
PDB header:transcription
Chain: S: PDB Molecule:transcription initiation factor tfiid subunit 13;
PDBTitle: human tfiid canonical state
12d1bh9a_



12.1 30
Fold:Histone-fold
Superfamily:Histone-fold
Family:TBP-associated factors, TAFs
13d1dpua_



11.9 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal domain of RPA32
14c1dpuA_



11.9 25
PDB header:dna binding protein
Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain;
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
15c6dnqE_



11.8 52
PDB header:transcription
Chain: E: PDB Molecule:bzip factor;
PDBTitle: hbz77 in complex with kix and c-myb
16c6n7xH_



11.5 28
PDB header:rna binding protein/rna
Chain: H: PDB Molecule:u1 small nuclear ribonucleoprotein component snu71;
PDBTitle: s. cerevisiae u1 snrnp
17c6dmxJ_



11.0 52
PDB header:transcription
Chain: J: PDB Molecule:bzip factor;
PDBTitle: hbz56 in complex with kix and c-myb
18d1xwdb1



10.6 30
Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
19d1ctla1



9.7 67
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
20c4d9gA_



9.3 23
PDB header:lyase
Chain: A: PDB Molecule:putative diaminopropionate ammonia-lyase;
PDBTitle: crystal structure of selenomethionine incorporated holo2 diaminopropionate ammonia lyase from escherichia coli
21c1dgjA_



not modelled 9.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774
22d1rp3a1



not modelled 8.8 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma3 domain
23c6et6A_



not modelled 8.6 19
PDB header:antimicrobial protein
Chain: A: PDB Molecule:lysozyme;
PDBTitle: crystal structure of muramidase from acinetobacter baumannii ab 5075uw2 prophage
24d176la_



not modelled 8.3 27
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Phage lysozyme
25c3h36A_



not modelled 8.2 32
PDB header:transferase
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: structure of an uncharacterized domain in polyribonucleotide2 nucleotidyltransferase from streptococcus mutans ua159
26c1qfwB_



not modelled 8.1 36
PDB header:immune system
Chain: B: PDB Molecule:gonadotrophin beta subunit;
PDBTitle: ternary complex of human chorionic gonadotropin with fv anti alpha2 subunit and fv anti beta subunit
27d1zxia1



not modelled 8.0 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
28d1hcnb_



not modelled 8.0 36
Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
29d2h7aa1



not modelled 7.8 30
Fold:YcgL-like
Superfamily:YcgL-like
Family:YcgL-like
30c2xl1A_



not modelled 7.8 44
PDB header:translation
Chain: A: PDB Molecule:arginine attenuator peptide;
PDBTitle: structural basis of translational stalling by human cytomegalovirus2 (hcmv) and fungal arginine attenuator peptide (aap)
31c6g90J_



not modelled 7.7 29
PDB header:splicing
Chain: J: PDB Molecule:u1 small nuclear ribonucleoprotein component snu71;
PDBTitle: prespliceosome structure provides insight into spliceosome assembly2 and regulation (map a2)
32c3hdfA_



not modelled 7.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme;
PDBTitle: crystal structure of truncated endolysin r21 from phage 21
33c2k9oA_



not modelled 6.9 42
PDB header:toxin
Chain: A: PDB Molecule:vm24 scorpion toxin;
PDBTitle: solution structure of vm24 synthetic scorpion toxin
34c3ebnD_



not modelled 6.8 21
PDB header:hydrolase
Chain: D: PDB Molecule:replicase polyprotein 1ab;
PDBTitle: a special dimerization of sars-cov main protease c-terminal2 domain due to domain-swapping
35c2ewtA_



not modelled 6.8 22
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of the dna-binding domain of bldd
36d1jroa1



not modelled 6.7 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
37c2lo9A_



not modelled 6.6 44
PDB header:toxin
Chain: A: PDB Molecule:mu-conotoxin buiiib;
PDBTitle: nmr solution structure of mu-contoxin buiiib
38d1ffva1



not modelled 6.6 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
39c2locA_



not modelled 6.5 37
PDB header:toxin
Chain: A: PDB Molecule:mu-conotoxin buiiib;
PDBTitle: conotoxin analogue [d-ala2]buiiib
40d1lxja_



not modelled 6.4 21
Fold:Ferredoxin-like
Superfamily:MTH1187/YkoF-like
Family:MTH1187-like
41c2y35A_



not modelled 6.4 21
PDB header:hydrolase/dna
Chain: A: PDB Molecule:ld22664p;
PDBTitle: crystal structure of xrn1-substrate complex
42c2ef8A_



not modelled 6.3 30
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcription factor;
PDBTitle: crystal structure of c.ecot38is
43d1vlba1



not modelled 6.2 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
44c2pl9D_



not modelled 6.1 88
PDB header:signaling protien
Chain: D: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal
45c2pl9F_



not modelled 6.0 88
PDB header:signaling protien
Chain: F: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal
46c2pl9E_



not modelled 6.0 88
PDB header:signaling protien
Chain: E: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal
47d1n62a1



not modelled 6.0 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
48d1rm6c1



not modelled 6.0 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
49c5u1dX_



not modelled 5.9 64
PDB header:transport protein
Chain: X: PDB Molecule:tap transporter inhibitor icp47;
PDBTitle: cryo-em structure of the human tap atp-binding cassette transporter
50c3pifD_



not modelled 5.8 23
PDB header:hydrolase
Chain: D: PDB Molecule:5'->3' exoribonuclease (xrn1);
PDBTitle: crystal structure of the 5'->3' exoribonuclease xrn1, e178q mutant in2 complex with manganese
51d1dgja1



not modelled 5.5 57
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
52c1j1eC_



not modelled 5.4 24
PDB header:contractile protein
Chain: C: PDB Molecule:troponin i;
PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form
53c2fhoA_



not modelled 5.4 48
PDB header:rna binding protein
Chain: A: PDB Molecule:spliceosomal protein sf3b155;
PDBTitle: nmr solution structure of the human spliceosomal protein2 complex p14-sf3b155
54c1ytzI_



not modelled 5.4 32
PDB header:contractile protein
Chain: I: PDB Molecule:troponin i;
PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 activated state
55d1v97a1



not modelled 5.3 71
Fold:CO dehydrogenase ISP C-domain like
Superfamily:CO dehydrogenase ISP C-domain like
Family:CO dehydrogenase ISP C-domain like
56c2i3tF_



not modelled 5.2 41
PDB header:cell cycle
Chain: F: PDB Molecule:spindle assembly checkpoint component;
PDBTitle: bub3 complex with mad3 (bubr1) glebs motif

Binding site prediction 

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