Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1055_(-)_1177244_1177378
DateWed Jul 31 22:05:13 BST 2019
Unique Job ID5f1b2018e970c660
SequenceMTLDRHGHLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.889 Y:16.787 Z:29.629
Model (left) based on template d1a1qa_
Top template information
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
Confidence and coverage
Confidence: 12.6% Coverage: 36%
16 residues ( 36% of your sequence) have been modelled with 12.6% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1a1qa_



12.6 31
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
2d1dxwa_



11.6 31
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
3d1cu1a1



11.0 31
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
4c4f2fA_



7.7 23
PDB header:metal binding protein
Chain: A: PDB Molecule:cation-transporting atpase, e1-e2 family protein;
PDBTitle: crystal structure of the metal binding domain (mbd) of the2 streptococcus pneumoniae d39 cu(i) exporting p-type atpase copa with3 cu(i)
5c4f2eA_



6.9 23
PDB header:metal transport
Chain: A: PDB Molecule:cupa;
PDBTitle: crystal structure of the streptococcus pneumoniae d39 copper chaperone2 cupa with cu(i)
6c4e8uA_



6.8 43
PDB header:rna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein t8p19.180;
PDBTitle: crystal structure of arabidopsis idn2 xs domain along with a small2 segment of adjacent coiled-coil region
7c2gv9B_



6.8 25
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
8c2b5bA_



6.6 53
PDB header:antibiotic
Chain: A: PDB Molecule:defensin;
PDBTitle: a reptilian defensin with anti-bacterial and anti-viral2 activity
9c5w3gA_



6.6 24
PDB header:dna binding protein
Chain: A: PDB Molecule:transcription factor pu.1;
PDBTitle: solution structure of ets transcription factor pu.1
10c3iufA_



6.5 50
PDB header:protein binding
Chain: A: PDB Molecule:zinc finger protein ubi-d4;
PDBTitle: crystal structure of the c2h2-type zinc finger domain of human ubi-d4
11c2a93B_



5.5 83
PDB header:leucine zippers
Chain: B: PDB Molecule:c-myc-max heterodimeric leucine zipper;
PDBTitle: nmr solution structure of the c-myc-max heterodimeric2 leucine zipper, 40 structures
12d1puee_



5.4 36
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ets domain

Binding site prediction 

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