Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1057_(-)_1179401_1180582
DateWed Jul 31 22:05:13 BST 2019
Unique Job ID5b2972e5d40c2ee7
SequenceMSVMNGREVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:56.727 Y:86.675 Z:66.156
Model (left) based on template c5juyB_
Top template information
PDB header:apoptosis
Chain: B: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: active human apoptosome with procaspase-9
Confidence and coverage
Confidence:100.0% Coverage: 95%
374 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5juyB_
100.0 17
PDB header:apoptosis
Chain: B: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: active human apoptosome with procaspase-9
2c6nd4O_
100.0 14
PDB header:ribosome
Chain: O: PDB Molecule:utp1;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
3c6nd4Q_
100.0 12
PDB header:ribosome
Chain: Q: PDB Molecule:utp12;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
4c5n1aB_
100.0 18
PDB header:translation
Chain: B: PDB Molecule:utp4;
PDBTitle: crystal structure of utp4 from chaetomium thermophilum
5c5i2tA_
100.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:periodic tryptophan protein 2;
PDBTitle: domain characterization of the wd protein pwp2 and their relevance in2 ribosome biogenesis
6c5tzsT_
100.0 13
PDB header:translation
Chain: T: PDB Molecule:utp21;
PDBTitle: architecture of the yeast small subunit processome
7c5a5uB_
100.0 13
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of mammalian eif3 in the context of the 43s preinitiation2 complex
8c3dm0A_
100.0 17
PDB header:sugar binding protein,signaling protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with rack1;
PDBTitle: maltose binding protein fusion with rack1 from a. thaliana
9c1nr0A_
100.0 18
PDB header:structural protein
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1).
10c4uerb_
100.0 10
PDB header:translation
Chain: B: PDB Molecule:us2;
PDBTitle: 40s-eif1-eif1a-eif3-eif3j translation initiation complex from2 lachancea kluyveri
11c6nd4T_
100.0 12
PDB header:ribosome
Chain: T: PDB Molecule:utp21;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
12c2ymuA_
100.0 23
PDB header:unknown function
Chain: A: PDB Molecule:wd-40 repeat protein;
PDBTitle: structure of a highly repetitive propeller structure
13c3iytG_
100.0 15
PDB header:apoptosis
Chain: G: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: structure of an apoptosome-procaspase-9 card complex
14c5a1vK_
100.0 15
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
15c5thaA_
100.0 16
PDB header:rna binding protein
Chain: A: PDB Molecule:gem-associated protein 5;
PDBTitle: gemin5 wd40 repeats in complex with a guanosyl moiety
16c5f30B_
100.0 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:thiocyanate dehydrogenase;
PDBTitle: thiocyanate dehydrogenase from thioalkalivibrio paradoxus
17c5cvlA_
100.0 13
PDB header:protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48 (uaf-1), residues 2-580
18c5cvoD_
100.0 13
PDB header:hydrolase/protein binding
Chain: D: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
19c5cvoA_
100.0 13
PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
20c6nd4H_
100.0 16
PDB header:ribosome
Chain: H: PDB Molecule:utp17;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
21c1pi6A_
not modelled 100.0 15
PDB header:protein binding
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: yeast actin interacting protein 1 (aip1), orthorhombic crystal form
22c4xfvA_
not modelled 100.0 13
PDB header:translation
Chain: A: PDB Molecule:elongator complex protein 2;
PDBTitle: crystal structure of elp2
23c4yczA_
not modelled 100.0 16
PDB header:structural protein
Chain: A: PDB Molecule:fusion protein of sec13 and nup145c;
PDBTitle: y-complex hub (nup85-nup120-nup145c-sec13 complex) from m. thermophila2 (a.k.a. t. heterothallica)
24c4nsxA_
not modelled 100.0 12
PDB header:protein binding
Chain: A: PDB Molecule:u3 small nucleolar rna-associated protein 21;
PDBTitle: crystal structure of the utp21 tandem wd domain
25c5k1bB_
not modelled 100.0 11
PDB header:protein binding/hydrolase
Chain: B: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: crystal structure of the uaf1/usp12 complex in f222 space group
26c5ch2A_
not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:putative polycomb protein eed;
PDBTitle: crystal structure of an active polycomb repressive complex 2 in the2 basal state
27c3wj9A_
not modelled 100.0 13
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2a;
PDBTitle: crystal structure of the eukaryotic initiation factor
28c4ci8B_
not modelled 100.0 15
PDB header:structural protein
Chain: B: PDB Molecule:echinoderm microtubule-associated protein-like 1;
PDBTitle: crystal structure of the tandem atypical beta-propeller domain of eml1
29c3bwsA_
not modelled 100.0 21
PDB header:unknown function
Chain: A: PDB Molecule:protein lp49;
PDBTitle: crystal structure of the leptospiral antigen lp49
30c4u1fA_
not modelled 100.0 11
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: crystal structure of middle domain of eukaryotic translation2 initiation factor eif3b
31c4yhcA_
not modelled 100.0 12
PDB header:structural protein
Chain: A: PDB Molecule:sterol regulatory element-binding protein cleavage-
PDBTitle: crystal structure of the wd40 domain of scap from fission yeast
32c6nd4N_
not modelled 100.0 11
PDB header:ribosome
Chain: N: PDB Molecule:utp4;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
33c4noxA_
not modelled 100.0 12
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of the nine-bladed beta-propeller of eif3b
34c4wjsA_
not modelled 100.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rsa4;
PDBTitle: crystal structure of rsa4 from chaetomium thermophilum
35c6chgD_
not modelled 100.0 10
PDB header:transferase
Chain: D: PDB Molecule:klla0a08800p;
PDBTitle: crystal structure of the yeast compass catalytic module
36c5mzhB_
not modelled 100.0 11
PDB header:motor protein
Chain: B: PDB Molecule:dynein assembly factor with wdr repeat domains 1;
PDBTitle: crystal structure of oda16 from chlamydomonas reinhardtii
37c6rteB_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c;
PDBTitle: dihydro-heme d1 dehydrogenase nirn in complex with dhe
38c4o9dA_
not modelled 100.0 10
PDB header:gene regulation
Chain: A: PDB Molecule:rik1-associated factor 1;
PDBTitle: structure of dos1 propeller
39c4wjuB_
not modelled 100.0 9
PDB header:biosynthetic protein
Chain: B: PDB Molecule:ribosome assembly protein 4;
PDBTitle: crystal structure of rsa4 from saccharomyces cerevisiae
40d1l0qa2
not modelled 100.0 26
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:YVTN repeat
41c5nzvC_
not modelled 100.0 8
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit beta';
PDBTitle: the structure of the copi coat linkage iv
42c1gq1B_
not modelled 100.0 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase;
PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised form
43c3mkqA_
not modelled 100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:coatomer beta'-subunit;
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
44d1fwxa2
not modelled 100.0 14
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
45d1jmxb_
not modelled 100.0 13
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
46c5a1vL_
not modelled 100.0 7
PDB header:transport protein
Chain: L: PDB Molecule:coatomer subunit beta;
PDBTitle: the structure of the copi coat linkage i
47c1nnoA_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitrite reductase;
PDBTitle: conformational changes occurring upon no binding in nitrite reductase2 from pseudomonas aeruginosa
48c5nnzB_
not modelled 100.0 10
PDB header:transport protein
Chain: B: PDB Molecule:dynein assembly factor with wdr repeat domains 1;
PDBTitle: crystal structure of human oda16
49c4e54B_
not modelled 100.0 13
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: damaged dna induced uv-damaged dna-binding protein (uv-ddb)2 dimerization and its roles in chromatinized dna repair
50c6iczW_
not modelled 100.0 12
PDB header:splicing
Chain: W: PDB Molecule:pre-mrna-processing factor 17;
PDBTitle: cryo-em structure of a human post-catalytic spliceosome (p complex) at2 3.0 angstrom
51c6nd4U_
not modelled 100.0 13
PDB header:ribosome
Chain: U: PDB Molecule:sof1;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
52c2oajA_
not modelled 100.0 12
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:protein sni1;
PDBTitle: crystal structure of sro7 from s. cerevisiae
53c4lg9A_
not modelled 100.0 10
PDB header:unknown function
Chain: A: PDB Molecule:f-box-like/wd repeat-containing protein tbl1xr1;
PDBTitle: crystal structure of tbl1xr1 wd40 repeats
54c6em5m_
not modelled 100.0 11
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l14-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
55d1pbyb_
not modelled 100.0 14
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
56c3jcmB_
not modelled 100.0 16
PDB header:transcription
Chain: B: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp4;
PDBTitle: cryo-em structure of the spliceosomal u4/u6.u5 tri-snrnp
57d2ovrb2
not modelled 100.0 10
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
58c6nd4S_
not modelled 100.0 14
PDB header:ribosome
Chain: S: PDB Molecule:utp18;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
59d1nira2
not modelled 100.0 11
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
60c5a1uC_
not modelled 100.0 10
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat triad
61c6cb1s_
not modelled 100.0 13
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l20-a;
PDBTitle: yeast nucleolar pre-60s ribosomal subunit (state 3)
62c2ovqB_
not modelled 100.0 11
PDB header:transcription/cell cycle
Chain: B: PDB Molecule:f-box/wd repeat protein 7;
PDBTitle: structure of the skp1-fbw7-cyclinedegc complex
63d1gxra_
not modelled 100.0 12
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
64c5n4aA_
not modelled 100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:intraflagellar transport protein 80;
PDBTitle: crystal structure of chlamydomonas ift80
65c3jroA_
not modelled 100.0 13
PDB header:transport protein, structural protein
Chain: A: PDB Molecule:fusion protein of protein transport protein sec13 and
PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice
66c3j65q_
not modelled 100.0 17
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
67c4zovB_
not modelled 100.0 10
PDB header:chaperone
Chain: B: PDB Molecule:ribosome assembly protein sqt1;
PDBTitle: crystal structure of the saccharomyces cerevisiae sqt1
68c6eojD_
not modelled 100.0 11
PDB header:rna binding protein
Chain: D: PDB Molecule:polyadenylation factor subunit 2,polyadenylation factor
PDBTitle: polya polymerase module of the cleavage and polyadenylation factor2 (cpf) from saccharomyces cerevisiae
69c1nexD_
not modelled 100.0 12
PDB header:ligase, cell cycle
Chain: D: PDB Molecule:cdc4 protein;
PDBTitle: crystal structure of scskp1-sccdc4-cpd peptide complex
70c6iyyA_
not modelled 100.0 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:wd repeat domain phosphoinositide-interacting protein 3;
PDBTitle: crystal structure of human wipi3,loop deletion mutant
71d1nexb2
not modelled 100.0 13
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
72c4bzkA_
not modelled 100.0 12
PDB header:protein transport
Chain: A: PDB Molecule:protein transport protein sec31;
PDBTitle: the structure of the copii coat assembled on membranes
73c2pm9A_
not modelled 100.0 12
PDB header:protein transport
Chain: A: PDB Molecule:protein transport protein sec31;
PDBTitle: crystal structure of yeast sec13/31 vertex element of the copii2 vesicular coat
74c3frxB_
not modelled 100.0 12
PDB header:signaling protein
Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta-
PDBTitle: crystal structure of the yeast orthologue of rack1, asc1.
75c2j57J_
not modelled 100.0 18
PDB header:oxidoreductase
Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain;
PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin.
76c4a11B_
not modelled 100.0 14
PDB header:dna binding protein
Chain: B: PDB Molecule:dna excision repair protein ercc-8;
PDBTitle: structure of the hsddb1-hscsa complex
77c5a31R_
not modelled 100.0 13
PDB header:cell cycle
Chain: R: PDB Molecule:the anaphase-promoting complex chain r;
PDBTitle: structure of the human apc-cdh1-hsl1-ubch10 complex.
78c5ov3B_
not modelled 100.0 14
PDB header:structural protein
Chain: B: PDB Molecule:retinoblastoma-binding protein 5;
PDBTitle: structure of the rbbp5 beta-propeller domain
79c5dfzB_
not modelled 100.0 10
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase vps15;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
80c6nd4W_
not modelled 100.0 14
PDB header:ribosome
Chain: W: PDB Molecule:utp7;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
81d1tbga_
not modelled 100.0 13
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
82c3zwlB_
not modelled 100.0 12
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit i;
PDBTitle: structure of eukaryotic translation initiation factor eif3i complex2 with eif3b c-terminus (655-700)
83c3jb9K_
not modelled 100.0 11
PDB header:rna binding protein/rna
Chain: K: PDB Molecule:pre-mrna-splicing factor prp5;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
84c6nd4J_
not modelled 100.0 16
PDB header:ribosome
Chain: J: PDB Molecule:utp15;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
85c3u4yA_
not modelled 100.0 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein (dtox_1751)2 from desulfotomaculum acetoxidans dsm 771.
86c6e29C_
not modelled 100.0 11
PDB header:protein binding
Chain: C: PDB Molecule:swd1-like protein;
PDBTitle: crystal structure of myceliophteria_thermophila cps50 (swd1) beta-2 propeller domain
87c2xznR_
not modelled 100.0 11
PDB header:ribosome
Chain: R: PDB Molecule:rack1;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
88c5g04R_
not modelled 100.0 16
PDB header:cell cycle
Chain: R: PDB Molecule:cell division cycle protein 20 homolog;
PDBTitle: structure of the human apc-cdc20-hsl1 complex
89c4jspC_
not modelled 100.0 16
PDB header:transferase
Chain: C: PDB Molecule:target of rapamycin complex subunit lst8;
PDBTitle: structure of mtordeltan-mlst8-atpgammas-mg complex
90d1nr0a1
not modelled 99.9 13
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
91c2pbiB_
not modelled 99.9 11
PDB header:signaling protein
Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta 5;
PDBTitle: the multifunctional nature of gbeta5/rgs9 revealed from its crystal2 structure
92c5o9zL_
not modelled 99.9 17
PDB header:splicing
Chain: L: PDB Molecule:wd40 repeat-containing protein smu1;
PDBTitle: cryo-em structure of a pre-catalytic human spliceosome primed for2 activation (b complex)
93c3acpA_
not modelled 99.9 11
PDB header:chaperone
Chain: A: PDB Molecule:wd repeat-containing protein ygl004c;
PDBTitle: crystal structure of yeast rpn14, a chaperone of the 19s regulatory2 particle of the proteasome
94c6bm0B_
not modelled 99.9 10
PDB header:protein binding
Chain: B: PDB Molecule:pre-mrna 3' end processing protein wdr33;
PDBTitle: cryo-em structure of human cpsf-160-wdr33 complex at 3.8 a resolution
95c4ui9R_
not modelled 99.9 17
PDB header:cell cycle
Chain: R: PDB Molecule:fizzy-related protein homolog;
PDBTitle: atomic structure of the human anaphase-promoting complex
96c3mmyE_
not modelled 99.9 9
PDB header:nuclear protein
Chain: E: PDB Molecule:mrna export factor;
PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1
97c6bk8D_
not modelled 99.9 12
PDB header:rna binding protein
Chain: D: PDB Molecule:pre-mrna-splicing factor prp46;
PDBTitle: s. cerevisiae spliceosomal post-catalytic p complex
98c3iz6a_
not modelled 99.9 8
PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein sa (s2p);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
99c1r5mA_
not modelled 99.9 13
PDB header:transcription
Chain: A: PDB Molecule:sir4-interacting protein sif2;
PDBTitle: crystal structure of the c-terminal wd40 domain of sif2
100c6mzcG_
not modelled 99.9 16
PDB header:transcription
Chain: G: PDB Molecule:transcription initiation factor tfiid subunit 5;
PDBTitle: human tfiid bc core
101c2w18A_
not modelled 99.9 15
PDB header:nuclear protein
Chain: A: PDB Molecule:partner and localizer of brca2;
PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2
102c5wbiA_
not modelled 99.9 14
PDB header:protein binding
Chain: A: PDB Molecule:regulatory-associated protein of tor 1;
PDBTitle: crystal structure of the arabidopsis thaliana raptor
103c5o9zF_
not modelled 99.9 11
PDB header:splicing
Chain: F: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp4;
PDBTitle: cryo-em structure of a pre-catalytic human spliceosome primed for2 activation (b complex)
104d1k32a3
not modelled 99.9 11
Fold:7-bladed beta-propeller
Superfamily:Tricorn protease domain 2
Family:Tricorn protease domain 2
105c4zoyA_
not modelled 99.9 10
PDB header:chaperone
Chain: A: PDB Molecule:sqt1;
PDBTitle: crystal structure of the chaetomium thermophilum sqt1
106d1qksa2
not modelled 99.9 11
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
107c1k32E_
not modelled 99.9 12
PDB header:hydrolase
Chain: E: PDB Molecule:tricorn protease;
PDBTitle: crystal structure of the tricorn protease
108c2gnqA_
not modelled 99.9 12
PDB header:transcription
Chain: A: PDB Molecule:wd-repeat protein 5;
PDBTitle: structure of wdr5
109c5mqfE_
not modelled 99.9 10
PDB header:splicing
Chain: E: PDB Molecule:pre-mrna-processing factor 17;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
110c5c2vB_
not modelled 99.9 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:hydrazine synthase beta subunit;
PDBTitle: kuenenia stuttgartiensis hydrazine synthase
111c1n6dE_
not modelled 99.9 12
PDB header:hydrolase
Chain: E: PDB Molecule:tricorn protease;
PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative
112c6fqlA_
not modelled 99.9 10
PDB header:rna binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase trim71;
PDBTitle: crystal structure of danio rerio lin41 filamin-nhl domains in complex2 with mab-10 3'utr 13mer rna
113c6n8sA_
not modelled 99.9 14
PDB header:lipid binding protein
Chain: A: PDB Molecule:lethal(2) giant larvae protein homolog 2;
PDBTitle: crystal structure of the human cell polarity protein lethal giant2 larvae 2 (lgl2). apkc phosphorylated, crystal form 3.
114d1qnia2
not modelled 99.9 16
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
115c1qniE_
not modelled 99.9 16
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitrous-oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from pseudomonas nautica,2 at 2.4a resolution
116c3jzhA_
not modelled 99.9 11
PDB header:gene regulation
Chain: A: PDB Molecule:polycomb protein eed;
PDBTitle: eed-h3k79me3
117c3jcrD_
not modelled 99.9 13
PDB header:splicing
Chain: D: PDB Molecule:u5-40k;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
118c3ei3B_
not modelled 99.9 9
PDB header:dna binding protein
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: structure of the hsddb1-drddb2 complex
119c4u7aA_
not modelled 99.9 11
PDB header:protein binding
Chain: A: PDB Molecule:ribosome biogenesis protein erb1;
PDBTitle: the carboxy-terminal domain of erb1 is a seven-bladed beta-propeller2 that binds rna.
120c6cmkB_
not modelled 99.9 13
PDB header:metal binding protein
Chain: B: PDB Molecule:aztd protein;
PDBTitle: crystal structure of citrobacter koseri aztd

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite