Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1064c_(lpqV)_1186909_1187328
DateWed Jul 31 22:05:14 BST 2019
Unique Job IDa305d77ca98bf8c8
SequenceVRPSRYAPLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.619 Y:8.629 Z:15.450
Model (left) based on template c3btpA_
Top template information
PDB header:dna binding protein, chaperone
Chain: A: PDB Molecule:single-strand dna-binding protein;
PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding
Confidence and coverage
Confidence: 22.2% Coverage: 6%
9 residues ( 6% of your sequence) have been modelled with 22.2% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Warning: 53% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3btpA_



22.2 89
PDB header:dna binding protein, chaperone
Chain: A: PDB Molecule:single-strand dna-binding protein;
PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding
2c3ez0D_



12.3 19
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein with ferritin-like fold;
PDBTitle: crystal structure of protein of unknown function with ferritin-like2 fold (yp_832262.1) from arthrobacter sp. fb24 at 2.33 a resolution
3d2i09a2



11.5 33
Fold:DeoB insert domain-like
Superfamily:DeoB insert domain-like
Family:DeoB insert domain-like
4c2hroA_



10.3 35
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of the full-lenght enzyme i of the pts system from2 staphylococcus carnosus
5c3sggA_



9.4 11
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical hydrolase;
PDBTitle: crystal structure of a putative hydrolase (bt_2193) from bacteroides2 thetaiotaomicron vpi-5482 at 1.25 a resolution
6c2rovA_



9.1 10
PDB header:transferase
Chain: A: PDB Molecule:rho-associated protein kinase 2;
PDBTitle: the split ph domain of rock ii
7c4zv4C_



8.7 20
PDB header:translation
Chain: C: PDB Molecule:tse6;
PDBTitle: structure of tse6 in complex with ef-tu
8c2dzjA_



8.3 29
PDB header:sugar binding protein
Chain: A: PDB Molecule:synaptic glycoprotein sc2;
PDBTitle: 2dzj/solution structure of the n-terminal ubiquitin-like2 domain in human synaptic glycoprotein sc2
9d1baka_



7.7 17
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
10c2ffuA_



7.5 56
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2;
PDBTitle: crystal structure of human ppgalnact-2 complexed with udp and ea2
11c6iwqE_



7.5 22
PDB header:transferase
Chain: E: PDB Molecule:n-acetylgalactosaminyltransferase 7;
PDBTitle: crystal structure of galnac-t7 with mn2+
12c2dhkA_



6.5 22
PDB header:immune system
Chain: A: PDB Molecule:tbc1 domain family member 2;
PDBTitle: solution structure of the ph domain of tbc1 domain family2 member 2 protein from human
13c2k47A_



6.5 20
PDB header:replication
Chain: A: PDB Molecule:phosphoprotein;
PDBTitle: solution structure of the c-terminal n-rna binding domain2 of the vesicular stomatitis virus phosphoprotein
14c2hwgA_



6.4 35
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of phosphorylated enzyme i of the phosphoenolpyruvate:sugar2 phosphotransferase system
15c5us5B_



6.2 17
PDB header:structural genomics
Chain: B: PDB Molecule:upf0297 protein ef_1202;
PDBTitle: solution structure of the ireb homodimer
16c5olaD_



6.1 30
PDB header:transcription
Chain: D: PDB Molecule:transcription elongation factor, mitochondrial;
PDBTitle: structure of mitochondrial transcription elongation complex in complex2 with elongation factor tefm
17c3ftqA_



5.6 31
PDB header:cell cycle
Chain: A: PDB Molecule:septin-2;
PDBTitle: crystal structure of septin 2 in complex with gppnhp and2 mg2+
18c5mr1A_



5.4 17
PDB header:signaling protein
Chain: A: PDB Molecule:interactor protein for cytohesin exchange factors 1;
PDBTitle: crystal structure of the pleckstrin homology domain of interactor2 protein for cytohesin exchange factors 1 (ipcef1)
19c5ifgB_



5.3 23
PDB header:hydrolase/antitoxin
Chain: B: PDB Molecule:antitoxin higa;
PDBTitle: crystal structure of higa-higb complex from e. coli

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