Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1068c_(PE_PGRS20)_1190762_1192153
DateWed Jul 31 22:05:14 BST 2019
Unique Job IDd60ed10fd3194460
SequenceMSYMIAVPDM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.590 Y:35.740 Z:53.173
Model (left) based on template c5xfsA_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 17%
78 residues ( 17% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
463 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 81% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsA_
100.0 47
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38a1
100.0 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c2g38A_
100.0 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c3hqvB_
99.3 27
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
5c1ygvA_
99.3 33
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
6c1y0fB_
99.2 31
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
7c3bogB_
97.5 37
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
8c3bogA_
97.5 37
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
9c2pneA_
97.3 35
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
10c3boiB_
97.3 35
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
11c3boiA_
97.3 35
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
12c4iogD_
95.2 14
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
13c1nayC_
95.1 23
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
14c3gvmA_
94.8 14
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
15c4wj2A_
94.8 11
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
16c5ctdB_
94.6 28
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
17c5ctiC_
94.3 26
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
18c5ctdA_
93.9 28
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
19c2vs0B_
92.5 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
20d1wa8a1
92.0 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
21c3zbhC_
not modelled 90.9 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
22c2kg7B_
not modelled 80.5 13
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
23c4lwsA_
not modelled 79.2 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
24c2klwA_
not modelled 78.5 30
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
25c2cuoF_
not modelled 70.2 41
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
26c2cuoC_
not modelled 70.2 41
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
27c3ah9F_
not modelled 64.6 44
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
28c4lwsB_
not modelled 63.3 16
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
29c3ah9A_
not modelled 61.6 48
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
30c3ah9B_
not modelled 61.1 46
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
31c3ah9E_
not modelled 61.1 46
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
32c3ah9C_
not modelled 61.1 46
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
33d1wa8b1
not modelled 59.3 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
34c2cuoB_
not modelled 58.7 46
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
35c2cuoD_
not modelled 58.7 46
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
36c2cuoA_
not modelled 58.7 46
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
37c2cuoE_
not modelled 58.7 46
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
38c4rglA_
not modelled 56.4 21
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
39c3ah9D_
not modelled 55.8 43
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
40c3a0mF_
not modelled 54.8 44
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
41c2w0cR_
not modelled 51.1 29
PDB header:virus
Chain: R: PDB Molecule:protein p3;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
42c3onjA_
not modelled 49.5 13
PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
43c3a19B_
not modelled 48.8 39
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
44c2d3hB_
not modelled 48.8 39
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
45c2d3hA_
not modelled 48.8 39
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
46c3v4cB_
not modelled 45.1 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:aldehyde dehydrogenase (nadp+);
PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021
47c3a19A_
not modelled 42.5 41
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
48c2d3hC_
not modelled 42.5 41
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
49c1k6fD_
not modelled 40.0 28
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
50c1k6fA_
not modelled 40.0 28
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
51c1k6fB_
not modelled 40.0 28
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
52c1k6fF_
not modelled 40.0 28
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
53c1k6fC_
not modelled 40.0 28
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
54c1k6fE_
not modelled 40.0 28
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
55d1lghb_
not modelled 38.6 36
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
56c3a19E_
not modelled 38.5 41
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
57c3a19C_
not modelled 38.5 41
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
58c2vsgB_
not modelled 36.7 13
PDB header:membrane protein
Chain: B: PDB Molecule:variant surface glycoprotein iltat 1.24;
PDBTitle: a structural motif in the variant surface glycoproteins of trypanosoma2 brucei
59c5xfsB_
not modelled 36.1 21
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
60c5u07B_
not modelled 35.7 11
PDB header:immune system
Chain: B: PDB Molecule:cse2;
PDBTitle: crispr rna-guided surveillance complex
61c3u8pB_
not modelled 34.0 18
PDB header:fluorescent protein, electron transport
Chain: B: PDB Molecule:cytochrome b562 integral fusion with enhanced green
PDBTitle: cytochrome b562 integral fusion with egfp
62c2d3hE_
not modelled 33.3 43
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
63c6g7oA_
not modelled 32.2 18
PDB header:membrane protein
Chain: A: PDB Molecule:alkaline ceramidase 3,soluble cytochrome b562;
PDBTitle: crystal structure of human alkaline ceramidase 3 (acer3) at 2.72 angstrom resolution
64c3a08C_
not modelled 31.8 45
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
65c3a19D_
not modelled 31.7 43
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
66c4c3sA_
not modelled 30.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: structure of a propionaldehyde dehydrogenase from the clostridium2 phytofermentans fucose utilisation bacterial microcompartment
67c1wrgA_
not modelled 29.5 29
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
68c2uwjE_
not modelled 28.9 19
PDB header:chaperone
Chain: E: PDB Molecule:type iii export protein psce;
PDBTitle: structure of the heterotrimeric complex which regulates type iii2 secretion needle formation
69c3a08E_
not modelled 28.5 45
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
70c3h6pB_
not modelled 28.1 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
71c3a08D_
not modelled 27.0 45
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
72c3a19F_
not modelled 27.0 45
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
73c2d3hD_
not modelled 27.0 45
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
74c1gz3B_
not modelled 27.0 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme, mitochondrial;
PDBTitle: molecular mechanism for the regulation of human mitochondrial nad(p)+-2 dependent malic enzyme by atp and fumarate
75c1bpoA_
not modelled 26.4 16
PDB header:membrane protein
Chain: A: PDB Molecule:protein (clathrin);
PDBTitle: clathrin heavy-chain terminal domain and linker
76c3a0aD_
not modelled 26.2 45
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-opg-(ppg)4, monoclinic, twinned crystal
77c3eqxB_
not modelled 26.0 15
PDB header:dna binding protein
Chain: B: PDB Molecule:fic domain containing transcriptional regulator;
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
78c3admD_
not modelled 24.8 50
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
79c1jiwP_
not modelled 24.3 22
PDB header:hydrolase/hyrolase inhibitor
Chain: P: PDB Molecule:alkaline metalloproteinase;
PDBTitle: crystal structure of the apr-aprin complex
80d1bpoa1
not modelled 23.7 17
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:Clathrin heavy-chain linker domain
81c3admB_
not modelled 23.5 50
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
82c3admA_
not modelled 23.5 50
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
83c3admE_
not modelled 23.5 50
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
84c3admF_
not modelled 23.5 50
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
85c3a08B_
not modelled 23.4 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
86c3a08A_
not modelled 23.4 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
87c3cucB_
not modelled 22.9 17
PDB header:signaling protein
Chain: B: PDB Molecule:protein of unknown function with a fic domain;
PDBTitle: crystal structure of a fic domain containing signaling protein2 (bt_2513) from bacteroides thetaiotaomicron vpi-5482 at 2.71 a3 resolution
88c3abnA_
not modelled 22.3 45
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-asp-gly-(pro-pro-gly)4 at 1.022 a
89d1n7ka_
not modelled 21.5 15
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
90c4krrA_
not modelled 21.2 12
PDB header:signaling protein
Chain: A: PDB Molecule:wnt inhibitor of dorsal protein;
PDBTitle: crystal structure of drosophila wntd n-terminal domain-linker2 (residues 31-240)
91c6et5u_
not modelled 21.1 21
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
92d2f6qa1
not modelled 20.6 17
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
93d2qtia1
not modelled 20.6 20
Fold:YejL-like
Superfamily:YejL-like
Family:YejL-like
94c1o0sB_
not modelled 20.4 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh
95c3a1hB_
not modelled 20.1 45
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure analysis of the collagen-like peptide, (ppg)4-otg-2 (ppg)4
96c4x2eA_
not modelled 19.8 21
PDB header:transferase
Chain: A: PDB Molecule:fic family protein putative filamentation induced by camp
PDBTitle: clostridium difficile wild type fic protein
97c6nb3B_
not modelled 19.7 17
PDB header:virus
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: mers-cov complex with human neutralizing lca60 antibody fab fragment2 (state 1)
98c3a0aB_
not modelled 19.5 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-opg-(ppg)4, monoclinic, twinned crystal
99d2g38b1
not modelled 19.5 20
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE

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