Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1073_(-)_1197236_1198087
DateWed Jul 31 22:05:15 BST 2019
Unique Job IDcbc4c035299e376d
SequenceMGAQPFIGSE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.203 Y:40.076 Z:37.585
Model (left) based on template c3r3pB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:mobile intron protein;
PDBTitle: homing endonuclease i-bth0305i catalytic domain
Confidence and coverage
Confidence: 99.6% Coverage: 34%
96 residues ( 34% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
253 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r3pB_



99.6 18
PDB header:hydrolase
Chain: B: PDB Molecule:mobile intron protein;
PDBTitle: homing endonuclease i-bth0305i catalytic domain
2c3hrlA_



99.3 29
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:endonuclease-like protein;
PDBTitle: crystal structure of a putative endonuclease-like protein (ngo0050)2 from neisseria gonorrhoeae
3d1cw0a_



99.3 14
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
4d1vsra_



98.0 15
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
5c4oq2A_



97.3 21
PDB header:hydrolase
Chain: A: PDB Molecule:restriction endonuclease pvurts1 i;
PDBTitle: 5hmc specific restriction endonuclease pvurts1i
6c4parC_



96.9 24
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:uncharacterized protein abasi;
PDBTitle: the 5-hydroxymethylcytosine-specific restriction enzyme abasi in a2 complex with product-like dna
7c6rdu2_



94.8 11
PDB header:proton transport
Chain: 2: PDB Molecule:asa-2: polytomella f-atp synthase associated subunit 2;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1e,2 monomer-masked refinement
8c1zelA_



91.0 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2827c;
PDBTitle: crystal structure of rv2827c protein from mycobacterium tuberculosis
9d1zela2



82.0 23
Fold:Rv2827c C-terminal domain-like
Superfamily:Rv2827c C-terminal domain-like
Family:Rv2827c C-terminal domain-like
10d1m0da_



80.7 22
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Endonuclease I (Holliday junction resolvase)
11c4p6iB_



27.9 18
PDB header:hydrolase
Chain: B: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: crystal structure of the cas1-cas2 complex from escherichia coli
12c4gqzB_



21.3 22
PDB header:metal binding protein
Chain: B: PDB Molecule:putative periplasmic or exported protein;
PDBTitle: crystal structure of s.cuep
13d2fcla1



16.8 19
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:TM1012-like
14c3dupB_



13.8 7
PDB header:hydrolase
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of mutt/nudix family hydrolase from rhodospirillum2 rubrum atcc 11170
15c2uwjG_



11.5 14
PDB header:chaperone
Chain: G: PDB Molecule:type iii export protein pscg;
PDBTitle: structure of the heterotrimeric complex which regulates type iii2 secretion needle formation
16c4makA_



11.1 12
PDB header:hydrolase
Chain: A: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: crystal structure of a putative ssrna endonuclease cas2, crispr2 adaptation protein from e.coli
17d2fuka1



10.1 19
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Atu1826-like
18c3wbzD_



9.9 16
PDB header:transferase
Chain: D: PDB Molecule:likely histidyl trna-specific guanylyltransferase;
PDBTitle: crystal structure of c. albicans trna(his) guanylyltransferase (thg1)2 with atp
19c5xoxD_



9.8 21
PDB header:transferase
Chain: D: PDB Molecule:trna(his) guanylyltransferase;
PDBTitle: crystal structure of trna(his) guanylyltranserase from saccharomyces2 cerevisiae
20c3otbB_



9.5 21
PDB header:transferase
Chain: B: PDB Molecule:trna(his) guanylyltransferase;
PDBTitle: crystal structure of human trnahis guanylyltransferase (thg1) - dgtp2 complex
21d1tfea_



not modelled 7.8 16
Fold:EF-Ts domain-like
Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain
Family:Elongation factor Ts (EF-Ts), dimerisation domain
22d1jg5a_



not modelled 6.9 7
Fold:GTP cyclohydrolase I feedback regulatory protein, GFRP
Superfamily:GTP cyclohydrolase I feedback regulatory protein, GFRP
Family:GTP cyclohydrolase I feedback regulatory protein, GFRP
23c4kgkB_



not modelled 6.4 24
PDB header:transferase
Chain: B: PDB Molecule:thg1-like uncharacterized protein;
PDBTitle: bacterial trna(his) guanylyltransferase (thg1)-like protein in complex2 with gtp
24c2pjpA_



not modelled 6.2 14
PDB header:translation/rna
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna
25d1ccwa_



not modelled 6.2 7
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
26c5vrvA_



not modelled 6.1 22
PDB header:hydrolase,oxidoreductase
Chain: A: PDB Molecule:protein regulated by acid ph;
PDBTitle: 2.05 angstrom resolution crystal structure of c-terminal domain2 (duf2156) of putative lysylphosphatidylglycerol synthetase from3 agrobacterium fabrum.
27d1ynha1



not modelled 6.0 35
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Succinylarginine dihydrolase-like
28d1hh1a_



not modelled 5.6 18
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Hjc-like
29c2wj0B_



not modelled 5.5 25
PDB header:hydrolase/dna
Chain: B: PDB Molecule:archaeal hjc;
PDBTitle: crystal structures of holliday junction resolvases from2 archaeoglobus fulgidus bound to dna substrate

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